Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38670 Brassica napus
Aa31LG8G2560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2344 Anthoceros agrestis
Ah.03g133100 Amaranthus hybridus
AL3G27790 Arabidopsis lyrata
AL5G21320 Arabidopsis lyrata
Aqoxy7G02831 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.32ME5N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.88IY7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A6AVFI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T8JHIW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W023QS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1G7Z9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIL91U Arachis hypogaea
AT3G15351 Arabidopsis thaliana
ATR0317G035 Amborella trichopoda
Atru.chr5.207 Acer truncatum
Atru.chr5.208 Acer truncatum
Atru.chr5.209 Acer truncatum
Atru.chr5.565 Acer truncatum
Atru.chr5.584 Acer truncatum
AUR62005450 Chenopodium quinoa
AUR62024291 Chenopodium quinoa
AUR62035275 Chenopodium quinoa
BcaB07g33539 Brassica carinata
BcaC01g05853 Brassica carinata
BcaC08g43270 Brassica carinata
BcaC09g48497 Brassica carinata
BolC1t04876H Brassica oleracea
BolC3t14558H Brassica oleracea
BolC6t35729H Brassica oleracea
BraA01t03917Z Brassica rapa
C01p49120 Brassica napus
C03p21760 Brassica napus
C06p06180 Brassica napus
CAN.G899.18 Capsicum annuum
CANSAT64G0775 Cannabis sativa
CARHR090340 Cardamine hirsuta
CARHR215320 Cardamine hirsuta
Carub.0003s1502 Capsella rubella
Carub.0008s1260 Capsella rubella
Ca_18388_v3 Cicer arietinum L.
Cc02_g24530 Coffea canephora
CDE06G2810 Ceratophyllum demersum
Cfa011129 Carpinus fangiana
Ciclev10022588m.g Citrus clementina
CiPaw.13G030400 Carya illinoinensis
ClCG05G000300 Citrullus lanatus
COL.COLO4_11958 Corchorus olitorius
COL.COLO4_12459 Corchorus olitorius
CSS0038442 Camellia sinensis var. sinensis
CSS0042819 Camellia sinensis var. sinensis
DCAR_022632 Daucus carota
DCAR_029781 Daucus carota
Dinv43651 Davidia involucrata
Duzib138G0601 Durio zibethinus
ECA234G0521 Erigeron canadensis
EL10Ac6g13797 Beta vulgaris
Eucgr.D02506 Eucalyptus grandis
FAN01G1609 Fragaria x ananassa
FAN03G2909 Fragaria x ananassa
FAN06G0284 Fragaria x ananassa
FAN06G1644 Fragaria x ananassa
FvH4_7g10630 Fragaria vesca
Glyma.02G101600 Glycine max
Glyma.03G117400 Glycine max
Glyma.07G109700 Glycine max
Glyma.16G097600 Glycine max
Gohir.A11G077700 Gossypium hirsutum
Gohir.D11G082100 Gossypium hirsutum
Gorai.007G087800 Gossypium raimondii
GSVIVG01018202001 Vitis vinifera
HanXRQChr05g0138431 Helianthus annuus
HanXRQChr13g0390291 Helianthus annuus
HanXRQChr16g0519281 Helianthus annuus
Haze_02734 Corylus avellana
Hma1.2p1_0341F.1_g130370 Hydrangea macrophylla
HPP92_023759 Vanilla planifolia
HPP92_023760 Vanilla planifolia
HPP92_023799 Vanilla planifolia
Hund06868 Selenicereus undatus
Lalb_Chr07g0195651 Lupinus albus
Lj3g0007809 Lotus japonicus
Lj5g0022701 Lotus japonicus
Lj9A562G31 Lonicera japonica
Lsat_1_v5_gn_4_43780 Lactuca sativa
Manes.01G270800 Manihot esculenta
Mapoly0002s0300 Marchantia polymorpha
MBI03_g13774_MAGBIO Magnolia biondii
MBI04_g11708_MAGBIO Magnolia biondii
MD01G1029500 Malus domestica
MD07G1111400 Malus domestica
MD10G1232800 Malus domestica
Medtr4g093680 Medicago truncatula
MELO3C005967.2 Cucumis melo
Migut.B01571 Erythranthe guttata
MSTRG.17149 Avicennia marina
Nitab4.5_0000706g0140 Nicotiana tabacum
Nitab4.5_0001823g0010 Nicotiana tabacum
Nn1g00967 Nelumbo nucifera
Nn6g33924 Nelumbo nucifera
Oeu061515.1 Olea europaea
Oeu063212.2 Olea europaea
Os06g0535333 Oryza sativa ssp. japonica
Os07g0485600 Oryza sativa ssp. japonica
Peaxi162Scf00377g00611 Petunia axillaris
PGR119G1038 Punica granatum
Phvul.010G055900 Phaseolus vulgaris
Potri.002G142000 Populus trichocarpa
Potri.002G142100 Populus trichocarpa
Potri.014G057550 Populus trichocarpa
Pp3c10_24560 Physcomitrium patens
Prupe.2G134800 Prunus persica
Psat2g165520 Pisum sativum
Psat5g158760 Pisum sativum
Psat6g056000 Pisum sativum
PSO017G2958 Papaver somniferum
PSO063G5716 Papaver somniferum
QL04p020302 Quercus lobata
QL04p035586 Quercus lobata
QL04p046167 Quercus lobata
QL12p027350 Quercus lobata
RcHm_v2.0_Chr1g0348571 Rosa chinensis
Rhsim07G0033000 Rhododendron simsii
Sabra02G0110600 Salix brachista
Sabra14G0041800 Salix brachista
Sc08g0005120 Simmondsia chinensis
Sed0016485 Sechium edule
SEGI_17839 Sequoiadendron giganteum
SEGI_40532 Sequoiadendron giganteum
SGA_v2.0_scaffold153G36948 Striga asiatica
SGA_v2.0_scaffold52G19196 Striga asiatica
SMO141G0160 Selaginella moellendorffii
Solyc01g090720.3 Solanum lycopersicum
Sopen01g036450 Solanum pennellii
Sp1g41650 Schrenkiella parvula
Sp7g07030 Schrenkiella parvula
TAR629G1420 Trochodendron aralioides
THA.LOC104813152 Tarenaya hassleriana
Thecc.01G386800 Theobroma cacao
Thhalv10002901m.g Eutrema salsugineum
Thhalv10009561m.g Eutrema salsugineum
Thhalv10009807m.g Eutrema salsugineum
Thhalv10009904m.g Eutrema salsugineum
Thhalv10009921m.g Eutrema salsugineum
Thhalv10021656m.g Eutrema salsugineum
Thhalv10023724m.g Eutrema salsugineum
TPR.G2894 Trifolium pratense
vmacro00550 Vaccinium macrocarpon
vmacro05238 Vaccinium macrocarpon
vmacro13464 Vaccinium macrocarpon
VMungo0331G1454 Vigna mungo
Zm00001eb272690 Zea mays

User provided reference genes

Program Settings