Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p52300 Brassica napus
Aa31LG6G2480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4392 Anthoceros agrestis
Actinidia33705 Actinidia chinensis
Ah.15g091890 Amaranthus hybridus
AL7G33780 Arabidopsis lyrata
Aqoxy1G01392 Aquilegia oxysepala
Aqoxy1G01394 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.503GVQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84NU8G Arachis hypogaea
AT4G20070 Arabidopsis thaliana
ATR0752G197 Amborella trichopoda
Atru.chr10.381 Acer truncatum
AUR62040483 Chenopodium quinoa
AUR62042800 Chenopodium quinoa
BcaB03g12600 Brassica carinata
BcaB05g22896 Brassica carinata
BcaC06g30644 Brassica carinata
BcaNung03491 Brassica carinata
BolC7t45575H Brassica oleracea
BraA03t14305Z Brassica rapa
C07p50740 Brassica napus
CAN.G883.4 Capsicum annuum
CANSAT35G0413 Cannabis sativa
CARHR226880 Cardamine hirsuta
Carub.0007s2106 Capsella rubella
Ca_01990_v3 Cicer arietinum L.
Cc09_g05270 Coffea canephora
Cc09_g05280 Coffea canephora
CDE03G0346 Ceratophyllum demersum
Cfa000658 Carpinus fangiana
Ciclev10015120m.g Citrus clementina
CiPaw.09G073300 Carya illinoinensis
ClCG03G004200 Citrullus lanatus
COL.COLO4_18027 Corchorus olitorius
Cpa.g.sc30.120 Carica papaya
Cre13.g580700 Chlamydomonas reinhardtii
CsaV3_1G010130 Cucumis sativus L.
CSS0024116 Camellia sinensis var. sinensis
DCAR_004342 Daucus carota
Dinv02919 Davidia involucrata
Dinv06747 Davidia involucrata
Duzib132G0434 Durio zibethinus
ECA246G2495 Erigeron canadensis
EL10Ac7g17240 Beta vulgaris
Eucgr.D00017 Eucalyptus grandis
FAN11G0705 Fragaria x ananassa
FAN21G1515 Fragaria x ananassa
FAN25G0809 Fragaria x ananassa
FvH4_3g12850 Fragaria vesca
Glyma.09G050800 Glycine max
Glyma.15G156900 Glycine max
Gohir.A10G112551 Gossypium hirsutum
Gohir.A12G049400 Gossypium hirsutum
Gohir.D08G096750 Gossypium hirsutum
Gohir.D10G154500 Gossypium hirsutum
Gohir.D12G047800 Gossypium hirsutum
Gorai.008G050700 Gossypium raimondii
Gorai.011G172400 Gossypium raimondii
GSVIVG01012140001 Vitis vinifera
HanXRQChr12g0378241 Helianthus annuus
Haze_06166 Corylus avellana
Hma1.2p1_0088F.1_g045100 Hydrangea macrophylla
Hma1.2p1_0088F.1_g045110 Hydrangea macrophylla
HPP92_016420 Vanilla planifolia
HPP92_026370 Vanilla planifolia
Hund18001 Selenicereus undatus
Lalb_Chr02g0154131 Lupinus albus
Lalb_Chr02g0154141 Lupinus albus
Lalb_Chr15g0083721 Lupinus albus
Lalb_Chr18g0052051 Lupinus albus
Lj1C1148G3 Lonicera japonica
Lj6g0020245 Lotus japonicus
Lsat_1_v5_gn_5_44281 Lactuca sativa
Manes.16G050400 Manihot esculenta
Mapoly0026s0071 Marchantia polymorpha
MBI18_g00538_MAGBIO Magnolia biondii
MCO01G784 Micromonas commoda
MD10G1228200 Malus domestica
Medtr2g035405 Medicago truncatula
MELO3C002403.2 Cucumis melo
Migut.M02005 Erythranthe guttata
MSTRG.21238 Avicennia marina
Nitab4.5_0000443g0210 Nicotiana tabacum
Nitab4.5_0000973g0030 Nicotiana tabacum
Nn7g38320 Nelumbo nucifera
Oeu025263.1 Olea europaea
Oeu046922.1 Olea europaea
Os06g0665500 Oryza sativa ssp. japonica
Peaxi162Scf00981g00019 Petunia axillaris
PGR004G1679 Punica granatum
PGSC0003DMG400009430 Solanum tuberosum
Phvul.009G242900 Phaseolus vulgaris
Potri.001G160100 Populus trichocarpa
Pp3c13_1740 Physcomitrium patens
Pp3c3_1160 Physcomitrium patens
Pp3s42_40 Physcomitrium patens
Pp3s96_40 Physcomitrium patens
Prupe.4G116700 Prunus persica
Psat1g150280 Pisum sativum
PSO541G1671 Papaver somniferum
PSO675G5466 Papaver somniferum
QL11p012412 Quercus lobata
QL11p012415 Quercus lobata
QL11p012432 Quercus lobata
RcHm_v2.0_Chr1g0315031 Rosa chinensis
RcHm_v2.0_Chr1g0315061 Rosa chinensis
RcHm_v2.0_Chr1g0315091 Rosa chinensis
RcHm_v2.0_Chr1g0315141 Rosa chinensis
RcHm_v2.0_Chr1g0315151 Rosa chinensis
RcHm_v2.0_Chr1g0315201 Rosa chinensis
RcHm_v2.0_Chr1g0315221 Rosa chinensis
RcHm_v2.0_Chr1g0315231 Rosa chinensis
RcHm_v2.0_Chr1g0315241 Rosa chinensis
RcHm_v2.0_Chr1g0315311 Rosa chinensis
RcHm_v2.0_Chr1g0315381 Rosa chinensis
RcHm_v2.0_Chr1g0315441 Rosa chinensis
RcHm_v2.0_Chr1g0315471 Rosa chinensis
RcHm_v2.0_Chr1g0315531 Rosa chinensis
RcHm_v2.0_Chr1g0315541 Rosa chinensis
RcHm_v2.0_Chr1g0315581 Rosa chinensis
RcHm_v2.0_Chr1g0315591 Rosa chinensis
RcHm_v2.0_Chr1g0315611 Rosa chinensis
RcHm_v2.0_Chr5g0020791 Rosa chinensis
RcHm_v2.0_Chr5g0020891 Rosa chinensis
RcHm_v2.0_Chr5g0021421 Rosa chinensis
RcHm_v2.0_Chr5g0021441 Rosa chinensis
RcHm_v2.0_Chr5g0021511 Rosa chinensis
RcHm_v2.0_Chr5g0021521 Rosa chinensis
RcHm_v2.0_Chr5g0029451 Rosa chinensis
RcHm_v2.0_Chr5g0029471 Rosa chinensis
Rhsim02G0252000 Rhododendron simsii
Sabra01G0132000 Salix brachista
Sc05g0004770 Simmondsia chinensis
Sed0007455 Sechium edule
SEGI_28835 Sequoiadendron giganteum
SEGI_41442 Sequoiadendron giganteum
SGA_v2.0_scaffold175G39334 Striga asiatica
SMO117G0201 Selaginella moellendorffii
Solyc02g068380.3 Solanum lycopersicum
Sopen02g017510 Solanum pennellii
Sp7g18530 Schrenkiella parvula
TAR624G1024 Trochodendron aralioides
THA.LOC104811816 Tarenaya hassleriana
Thecc.02G004600 Theobroma cacao
Thhalv10024702m.g Eutrema salsugineum
Thhalv10025370m.g Eutrema salsugineum
TPR.G135 Trifolium pratense
TWI38G0011 Tripterygium wilfordii
TWI63G0224 Tripterygium wilfordii
unitig_92.g28192 Utricularia gibba
VMungo1309G0038 Vigna mungo
Zm00001eb389820 Zea mays

User provided reference genes

Program Settings