Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13010 Brassica napus
A06p22020 Brassica napus
Aa31LG2G2270 Aethionema arabicum
Aa31LG4G13870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.165 Anthoceros agrestis
Actinidia06813 Actinidia chinensis
Ah.06g195620 Amaranthus hybridus
AL2G19720 Arabidopsis lyrata
AL5G22510 Arabidopsis lyrata
AL5G22530 Arabidopsis lyrata
Aqoxy1G01799 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea
AT1G65080 Arabidopsis thaliana
AT3G44370 Arabidopsis thaliana
ATR0582G066 Amborella trichopoda
Atru.chr12.2135 Acer truncatum
AUR62000357 Chenopodium quinoa
AUR62006702 Chenopodium quinoa
BcaB01g01166 Brassica carinata
BcaB05g24081 Brassica carinata
BcaC01g02045 Brassica carinata
BcaC03g14673 Brassica carinata
BcaC03g14674 Brassica carinata
BolC2t08253H Brassica oleracea
BolC3t19174H Brassica oleracea
BraA02t06357Z Brassica rapa
BraA06t25290Z Brassica rapa
C02p21130 Brassica napus
C03p69210 Brassica napus
CAN.G1086.4 Capsicum annuum
CANSAT54G0263 Cannabis sativa
CARHR056570 Cardamine hirsuta
CARHR104500 Cardamine hirsuta
Carub.0002s1042 Capsella rubella
Carub.0005s1010 Capsella rubella
Ca_07962_v3 Cicer arietinum L.
Ca_07963_v3 Cicer arietinum L.
Cc09_g03390 Coffea canephora
CDE02G0647 Ceratophyllum demersum
Cfa006284 Carpinus fangiana
Ciclev10007912m.g Citrus clementina
CiPaw.07G074800 Carya illinoinensis
ClCG11G007410 Citrullus lanatus
ClCG11G007440 Citrullus lanatus
COL.COLO4_07809 Corchorus olitorius
COL.COLO4_07810 Corchorus olitorius
Cpa.g.c33279 Carica papaya
Cpa.g.sc18.187 Carica papaya
Cpa.g.sc18.189 Carica papaya
CsaV3_2G010380 Cucumis sativus L.
DCAR_003341 Daucus carota
DCAR_026472 Daucus carota
Dinv09864 Davidia involucrata
Duzib128G0048 Durio zibethinus
ECA233G4148 Erigeron canadensis
EL10Ac4g09418 Beta vulgaris
EL10Ac6g14361 Beta vulgaris
Eucgr.B01387 Eucalyptus grandis
FAN02G3908 Fragaria x ananassa
FAN05G3281 Fragaria x ananassa
FAN09G1822 Fragaria x ananassa
FAN14G5305 Fragaria x ananassa
FvH4_6g00770 Fragaria vesca
Glyma.09G252466 Glycine max
Glyma.18G240200 Glycine max
Gohir.A09G053766 Gossypium hirsutum
Gohir.A09G053832 Gossypium hirsutum
Gohir.D09G053068 Gossypium hirsutum
Gorai.006G054700 Gossypium raimondii
GSVIVG01019145001 Vitis vinifera
HanXRQChr01g0025761 Helianthus annuus
Haze_04525 Corylus avellana
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla
HPP92_007971 Vanilla planifolia
Hund07323 Selenicereus undatus
Lalb_Chr19g0126781 Lupinus albus
Lj1g0016449 Lotus japonicus
Lj2A408T57 Lonicera japonica
Lsat_1_v5_gn_8_2080 Lactuca sativa
Manes.09G172300 Manihot esculenta
Manes.09G184100 Manihot esculenta
Mapoly0072s0017 Marchantia polymorpha
MBI11_g43072_MAGBIO Magnolia biondii
MCO16G533 Micromonas commoda
MD12G1258300 Malus domestica
MD12G1258500 Malus domestica
Medtr7g079500 Medicago truncatula
MELO3C008585.2 Cucumis melo
Migut.I01185 Erythranthe guttata
MSTRG.10886 Avicennia marina
Nitab4.5_0000167g0010 Nicotiana tabacum
Nitab4.5_0000167g0020 Nicotiana tabacum
Nitab4.5_0000188g0370 Nicotiana tabacum
Nitab4.5_0004158g0040 Nicotiana tabacum
Nitab4.5_0004158g0050 Nicotiana tabacum
Nitab4.5_0004158g0060 Nicotiana tabacum
Nn3g16227 Nelumbo nucifera
Oeu023621.1 Olea europaea
Os06g0171600 Oryza sativa ssp. japonica
Peaxi162Scf01013g00123 Petunia axillaris
PGR119G0192 Punica granatum
PGR119G2407 Punica granatum
PGSC0003DMG400014032 Solanum tuberosum
PGSC0003DMG400018032 Solanum tuberosum
PGSC0003DMG401000916 Solanum tuberosum
PGSC0003DMG402000916 Solanum tuberosum
Phvul.008G056000 Phaseolus vulgaris
Potri.009G121800 Populus trichocarpa
Potri.013G087950 Populus trichocarpa
Pp3c8_14790 Physcomitrium patens
Prupe.6G359000 Prunus persica
Psat3g104280 Pisum sativum
PSO017G3896 Papaver somniferum
PSO478G4613 Papaver somniferum
QL02p047766 Quercus lobata
QL02p047782 Quercus lobata
RcHm_v2.0_Chr3g0448211 Rosa chinensis
RcHm_v2.0_Chr3g0448251 Rosa chinensis
Rhsim10G0138100 Rhododendron simsii
Sabra09G0094100 Salix brachista
Sabra13G0069900 Salix brachista
SalBow6G0845 Salvia bowleyana
SalBow6G3714 Salvia bowleyana
Sc06g0005090 Simmondsia chinensis
Sed0020944 Sechium edule
SEGI_16462 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33281 Striga asiatica
SGA_v2.0_scaffold71G24001 Striga asiatica
Solyc11g013060.1 Solanum lycopersicum
Solyc11g013080.3 Solanum lycopersicum
Solyc11g018720.1 Solanum lycopersicum
Solyc11g018740.3 Solanum lycopersicum
Sopen11g007800 Solanum pennellii
Sopen11g009760 Solanum pennellii
Sp5g16820 Schrenkiella parvula
Sp5g19610 Schrenkiella parvula
SpUn0108_0010 Schrenkiella parvula
TAR374G0592 Trochodendron aralioides
THA.LOC104805710 Tarenaya hassleriana
THA.LOC104814783 Tarenaya hassleriana
Thecc.05G205800 Theobroma cacao
Thhalv10010266m.g Eutrema salsugineum
Thhalv10022463m.g Eutrema salsugineum
TPR.G29414 Trifolium pratense
TWI59G0982 Tripterygium wilfordii
unitig_32.g11006 Utricularia gibba
vmacro12848 Vaccinium macrocarpon
vmacro12849 Vaccinium macrocarpon
vmacro12850 Vaccinium macrocarpon
vmacro12851 Vaccinium macrocarpon
VMungo1383G1726 Vigna mungo
Zm00001eb375410 Zea mays

User provided reference genes

Program Settings