Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24610 Brassica napus
A04p33140 Brassica napus
Aa31LG1G25650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2829 Anthoceros agrestis
Actinidia11430 Actinidia chinensis
Actinidia18397 Actinidia chinensis
Actinidia34565 Actinidia chinensis
Actinidia39253 Actinidia chinensis
Ah.07g203210 Amaranthus hybridus
Ah.07g203220 Amaranthus hybridus
Ah.13g073170 Amaranthus hybridus
AL4G42830 Arabidopsis lyrata
Aqoxy5G00034 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PJYW2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TNA3AF Arachis hypogaea
AT2G43950 Arabidopsis thaliana
ATR0743G163 Amborella trichopoda
Atru.chr3.1996 Acer truncatum
AUR62002483 Chenopodium quinoa
AUR62023709 Chenopodium quinoa
BcaB01g03349 Brassica carinata
BcaB01g03351 Brassica carinata
BcaB02g11099 Brassica carinata
BcaB04g18803 Brassica carinata
BcaB06g29351 Brassica carinata
BcaB06g29509 Brassica carinata
BcaC02g07141 Brassica carinata
BcaC06g33352 Brassica carinata
BcaC07g42475 Brassica carinata
BolC3t15281H Brassica oleracea
BolC7t45177H Brassica oleracea
BraA03t11666Z Brassica rapa
BraA04t18773Z Brassica rapa
C03p29340 Brassica napus
C04p70840 Brassica napus
C07p46620 Brassica napus
CAN.G458.7 Capsicum annuum
CANSAT56G1350 Cannabis sativa
CARHR139130 Cardamine hirsuta
CARHR257120 Cardamine hirsuta
Carub.0004s2652 Capsella rubella
Ca_13543_v3 Cicer arietinum L.
CBR_g30320 Chara braunii
Cc03_g15980 Coffea canephora
CDE02G4358 Ceratophyllum demersum
CDE09G1416 Ceratophyllum demersum
Cfa008514 Carpinus fangiana
Ciclev10021021m.g Citrus clementina
CiPaw.01G201700 Carya illinoinensis
CiPaw.02G124700 Carya illinoinensis
ClCG09G014480 Citrullus lanatus
COL.COLO4_16819 Corchorus olitorius
Cpa.g.sc151.7 Carica papaya
CsaV3_6G037260 Cucumis sativus L.
CSS0009446 Camellia sinensis var. sinensis
CSS0027099 Camellia sinensis var. sinensis
DCAR_029913 Daucus carota
Dinv24752 Davidia involucrata
Duzib084G0132 Durio zibethinus
Duzib205G0343 Durio zibethinus
ECA232G4673 Erigeron canadensis
EL10Ac3g06166 Beta vulgaris
Eucgr.A00426 Eucalyptus grandis
Eucgr.A00428 Eucalyptus grandis
Eucgr.D01249 Eucalyptus grandis
Eucgr.D01533 Eucalyptus grandis
Eucgr.L00828 Eucalyptus grandis
FAN07G0128 Fragaria x ananassa
FAN26G2560 Fragaria x ananassa
FAN26G2598 Fragaria x ananassa
FvH4_1g00191 Fragaria vesca
Glyma.17G000700 Glycine max
Gohir.A08G102400 Gossypium hirsutum
Gohir.A11G015800 Gossypium hirsutum
Gohir.A12G247900 Gossypium hirsutum
Gohir.D08G113600 Gossypium hirsutum
Gohir.D11G015800 Gossypium hirsutum
Gohir.D12G248600 Gossypium hirsutum
Gorai.004G122500 Gossypium raimondii
Gorai.007G016400 Gossypium raimondii
Gorai.008G266600 Gossypium raimondii
GSVIVG01038250001 Vitis vinifera
HanXRQChr03g0094031 Helianthus annuus
Haze_11130 Corylus avellana
Hma1.2p1_0872F.1_g231140 Hydrangea macrophylla
HPP92_004517 Vanilla planifolia
HPP92_004526 Vanilla planifolia
Hund12277 Selenicereus undatus
Hund22592 Selenicereus undatus
Hund22594 Selenicereus undatus
Lalb_Chr13g0304481 Lupinus albus
Lj4g0002865 Lotus japonicus
Lj6A619G67 Lonicera japonica
Lsat_1_v5_gn_7_44620 Lactuca sativa
Manes.01G010100 Manihot esculenta
Mapoly0065s0080 Marchantia polymorpha
MBI10_g16333_MAGBIO Magnolia biondii
MD00G1087400 Malus domestica
MD09G1202400 Malus domestica
MD15G1143200 Malus domestica
Medtr4g134950 Medicago truncatula
MELO3C014389.2 Cucumis melo
Migut.G00919 Erythranthe guttata
Migut.G00920 Erythranthe guttata
Migut.N03030 Erythranthe guttata
MSTRG.4551 Avicennia marina
Nitab4.5_0000129g0470 Nicotiana tabacum
Nitab4.5_0006607g0020 Nicotiana tabacum
Nn1g09422 Nelumbo nucifera
Oeu033086.1 Olea europaea
Oeu053428.1 Olea europaea
Os02g0608900 Oryza sativa ssp. japonica
Os12g0225200 Oryza sativa ssp. japonica
Peaxi162Scf00329g00933 Petunia axillaris
PGR042G3220 Punica granatum
PGSC0003DMG400029438 Solanum tuberosum
Phvul.003G074500 Phaseolus vulgaris
Potri.007G144900 Populus trichocarpa
Potri.017G007300 Populus trichocarpa
Pp3c26_11540 Physcomitrium patens
Pp3c3_3220 Physcomitrium patens
Prupe.7G269800 Prunus persica
Psat4g001240 Pisum sativum
PSO675G6376 Papaver somniferum
PSO732G0644 Papaver somniferum
QL10p064343 Quercus lobata
QL10p064358 Quercus lobata
RcHm_v2.0_Chr2g0084461 Rosa chinensis
RcHm_v2.0_Chr7g0203201 Rosa chinensis
Rhsim09G0003600 Rhododendron simsii
Sabra07G0115900 Salix brachista
Sabra17G0008100 Salix brachista
SalBow3G1744 Salvia bowleyana
Sc25g0003030 Simmondsia chinensis
Sed0001216 Sechium edule
SGA_v2.0_scaffold12G06219 Striga asiatica
SMO119G0235 Selaginella moellendorffii
Solyc04g008520.3 Solanum lycopersicum
Sopen04g003670 Solanum pennellii
Sp4g26050 Schrenkiella parvula
TAR362G0479 Trochodendron aralioides
TAR362G0528 Trochodendron aralioides
THA.LOC104802343 Tarenaya hassleriana
THA.LOC104804303 Tarenaya hassleriana
Thecc.03G204200 Theobroma cacao
Thecc.05G001800 Theobroma cacao
Thhalv10001539m.g Eutrema salsugineum
TPR.G5989 Trifolium pratense
unitig_37.g12004 Utricularia gibba
vmacro00722 Vaccinium macrocarpon
VMungo1215G0856 Vigna mungo
Zm00001eb133840 Zea mays
Zm00001eb246750 Zea mays

User provided reference genes

Program Settings