Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21370 Brassica napus
A03p49650 Brassica napus
Aa31LG10G5910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.583 Anthoceros agrestis
Actinidia18457 Actinidia chinensis
Actinidia40384 Actinidia chinensis
Ah.05g176730 Amaranthus hybridus
AL7G38910 Arabidopsis lyrata
Aqoxy2G02702 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HD9JLY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZA4S8T Arachis hypogaea
AT4G16180 Arabidopsis thaliana
ATR0345G001 Amborella trichopoda
ATR0693G033 Amborella trichopoda
Atru.chr4.3039 Acer truncatum
AUR62016223 Chenopodium quinoa
AUR62039265 Chenopodium quinoa
BcaC06g32994 Brassica carinata
BcaC06g33458 Brassica carinata
BcaC09g50317 Brassica carinata
BcaNung00215 Brassica carinata
BolC1t02613H Brassica oleracea
BolC7t45297H Brassica oleracea
BraA01t02042Z Brassica rapa
BraA03t14064Z Brassica rapa
C01p26720 Brassica napus
C07p47720 Brassica napus
CAN.G244.3 Capsicum annuum
CANSAT78G1713 Cannabis sativa
CARHR222550 Cardamine hirsuta
Carub.0007s2536 Capsella rubella
Ca_21436_v3 Cicer arietinum L.
CBR_g61507 Chara braunii
Cc03_g00710 Coffea canephora
CDE02G0522 Ceratophyllum demersum
Cfa015302 Carpinus fangiana
Ciclev10004336m.g Citrus clementina
CiPaw.01G137100 Carya illinoinensis
ClCG05G006610 Citrullus lanatus
COL.COLO4_34600 Corchorus olitorius
Cpa.g.sc9.47 Carica papaya
Cre10.g463300 Chlamydomonas reinhardtii
CsaV3_3G015230 Cucumis sativus L.
CSS0017759 Camellia sinensis var. sinensis
CSS0026249 Camellia sinensis var. sinensis
CSS0032110 Camellia sinensis var. sinensis
CSS0034063 Camellia sinensis var. sinensis
DCAR_030463 Daucus carota
Dinv15153 Davidia involucrata
Duzib212G0926 Durio zibethinus
ECA233G5711 Erigeron canadensis
ECA234G0649 Erigeron canadensis
EL10Ac3g05522 Beta vulgaris
EL10Ac4g08939 Beta vulgaris
Eucgr.H04055 Eucalyptus grandis
Eucgr.H04185 Eucalyptus grandis
FAN07G2526 Fragaria x ananassa
FAN12G0990 Fragaria x ananassa
FvH4_4g19930 Fragaria vesca
Glyma.07G238900 Glycine max
Glyma.17G034800 Glycine max
Gohir.A10G173100 Gossypium hirsutum
Gohir.D10G179600 Gossypium hirsutum
Gorai.011G200900 Gossypium raimondii
GSVIVG01034914001 Vitis vinifera
GSVIVG01034917001 Vitis vinifera
GSVIVG01034918001 Vitis vinifera
GSVIVG01034925001 Vitis vinifera
GSVIVG01034928001 Vitis vinifera
GSVIVG01034978001 Vitis vinifera
HanXRQChr02g0048601 Helianthus annuus
HanXRQChr11g0353871 Helianthus annuus
Haze_01312 Corylus avellana
HPP92_005423 Vanilla planifolia
HPP92_005424 Vanilla planifolia
HPP92_005425 Vanilla planifolia
Hund03132 Selenicereus undatus
Lalb_Chr07g0182051 Lupinus albus
Lj3C833T2 Lonicera japonica
Lj4g0007943 Lotus japonicus
Lsat_1_v5_gn_1_41600 Lactuca sativa
Lsat_1_v5_gn_6_1101 Lactuca sativa
Lsat_1_v5_gn_9_59160 Lactuca sativa
Manes.03G205800 Manihot esculenta
Manes.15G000800 Manihot esculenta
Mapoly0066s0100 Marchantia polymorpha
MCO15G339 Micromonas commoda
MD16G1152500 Malus domestica
MELO3C006720.2 Cucumis melo
Migut.G00071 Erythranthe guttata
MSTRG.10156 Avicennia marina
Nitab4.5_0000177g0090 Nicotiana tabacum
Nitab4.5_0000931g0050 Nicotiana tabacum
Nn2g14951 Nelumbo nucifera
Nn2g14956 Nelumbo nucifera
Nn4g25546 Nelumbo nucifera
Oeu046577.1 Olea europaea
Oeu052162.4 Olea europaea
Os03g0310500 Oryza sativa ssp. japonica
Peaxi162Scf00228g00333 Petunia axillaris
PGR004G0637 Punica granatum
PGSC0003DMG400001205 Solanum tuberosum
PGSC0003DMG402014601 Solanum tuberosum
Phvul.003G115600 Phaseolus vulgaris
Potri.008G104100 Populus trichocarpa
Potri.010G146800 Populus trichocarpa
Pp3c16_6520 Physcomitrium patens
Pp3c5_14560 Physcomitrium patens
Pp3c6_13230 Physcomitrium patens
PRCOL_00001897 Prasinoderma coloniale
Prupe.1G115700 Prunus persica
Psat0s3230g0160 Pisum sativum
Psat0s6958g0040 Pisum sativum
Psat4g022840 Pisum sativum
PSO210G2958 Papaver somniferum
PSO761G0636 Papaver somniferum
QL06p012610 Quercus lobata
RcHm_v2.0_Chr4g0401771 Rosa chinensis
RcHm_v2.0_Chr4g0425571 Rosa chinensis
Rhsim04G0240100 Rhododendron simsii
Rhsim05G0134500 Rhododendron simsii
Sabra10G0113000 Salix brachista
Sabra15G0067600 Salix brachista
SalBow8G2376 Salvia bowleyana
Sc09g0007260 Simmondsia chinensis
Sed0001798 Sechium edule
Sed0007022 Sechium edule
SEGI_02776 Sequoiadendron giganteum
SEGI_30135 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30069 Striga asiatica
SHI00124 Sapria himalayana
SHI00126 Sapria himalayana
SMO298G0056 Selaginella moellendorffii
Solyc01g058730.4 Solanum lycopersicum
Solyc05g051345.1 Solanum lycopersicum
Sopen01g024570 Solanum pennellii
Sp7g14690 Schrenkiella parvula
TAR365G0460 Trochodendron aralioides
THA.LOC104802608 Tarenaya hassleriana
Thecc.04G302500 Theobroma cacao
Thhalv10024420m.g Eutrema salsugineum
TPR.G25430 Trifolium pratense
TWI09G1587 Tripterygium wilfordii
TWI53G0610 Tripterygium wilfordii
vmacro08030 Vaccinium macrocarpon
vmacro08031 Vaccinium macrocarpon
VMungo1215G1911 Vigna mungo
Zm00001eb014900 Zea mays
Zm00001eb168500 Zea mays
Zm00001eb269880 Zea mays
Zm00001eb305610 Zea mays
Zm00001eb331620 Zea mays
Zm00001eb339670 Zea mays

User provided reference genes

Program Settings