Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07110 Brassica napus
A03p32690 Brassica napus
A05p44830 Brassica napus
A10p23550 Brassica napus
Aa31LG11G14220 Aethionema arabicum
Aa31LG5G12500 Aethionema arabicum
AL3G11130 Arabidopsis lyrata
AL6G26200 Arabidopsis lyrata
Aqoxy5G01447 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.50HBEA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LS9ND1 Arachis hypogaea
AT3G01130 Arabidopsis thaliana
AT5G15320 Arabidopsis thaliana
Atru.chr10.813 Acer truncatum
Atru.chr13.327 Acer truncatum
Atru.chr5.3177 Acer truncatum
AUR62010366 Chenopodium quinoa
BcaB08g36903 Brassica carinata
BcaB08g36904 Brassica carinata
BcaC01g04504 Brassica carinata
BcaC04g18956 Brassica carinata
BcaC05g30384 Brassica carinata
BcaC05g30492 Brassica carinata
BolC3t13307H Brassica oleracea
BolC3t16243H Brassica oleracea
BolC5t35118H Brassica oleracea
BolC9t59016H Brassica oleracea
BraA03t10033Z Brassica rapa
BraA03t12437Z Brassica rapa
BraA05t23174Z Brassica rapa
BraA10t44421Z Brassica rapa
C03p08100 Brassica napus
C03p39790 Brassica napus
C09p61780 Brassica napus
C09p75420 Brassica napus
CAN.G104.4 Capsicum annuum
CAN.G1329.6 Capsicum annuum
CANSAT11G1677 Cannabis sativa
CARHR075920 Cardamine hirsuta
CARHR197990 Cardamine hirsuta
Carub.0003s0104 Capsella rubella
Carub.0006s1351 Capsella rubella
Ca_09579_v3 Cicer arietinum L.
CDE02G1235 Ceratophyllum demersum
Cfa005123 Carpinus fangiana
Ciclev10003088m.g Citrus clementina
Ciclev10029771m.g Citrus clementina
CiPaw.05G074500 Carya illinoinensis
CiPaw.06G127200 Carya illinoinensis
CiPaw.09G132900 Carya illinoinensis
ClCG02G004430 Citrullus lanatus
ClCG05G018500 Citrullus lanatus
COL.COLO4_10615 Corchorus olitorius
Cpa.g.sc150.3 Carica papaya
CsaV3_3G045680 Cucumis sativus L.
CsaV3_7G000550 Cucumis sativus L.
CSS0029185 Camellia sinensis var. sinensis
CSS0030409 Camellia sinensis var. sinensis
Duzib052G0912 Durio zibethinus
Duzib132G0136 Durio zibethinus
Duzib248G1544 Durio zibethinus
EL10Ac9g21611 Beta vulgaris
Eucgr.G01742 Eucalyptus grandis
Eucgr.I01336 Eucalyptus grandis
FAN15G1739 Fragaria x ananassa
FAN20G1549 Fragaria x ananassa
FvH4_2g40200 Fragaria vesca
FvH4_2g40204 Fragaria vesca
Glyma.09G222500 Glycine max
Glyma.12G036000 Glycine max
Gohir.A04G123300 Gossypium hirsutum
Gohir.A12G040700 Gossypium hirsutum
Gohir.A13G086700 Gossypium hirsutum
Gohir.D04G165300 Gossypium hirsutum
Gohir.D12G031701 Gossypium hirsutum
Gohir.D13G090600 Gossypium hirsutum
Gorai.001G244100 Gossypium raimondii
GSVIVG01009863001 Vitis vinifera
HanXRQChr17g0551041 Helianthus annuus
Hma1.2p1_0066F.1_g035670 Hydrangea macrophylla
Hund00173 Selenicereus undatus
Hund00181 Selenicereus undatus
Hund06293 Selenicereus undatus
Lalb_Chr01g0002101 Lupinus albus
Lalb_Chr03g0025281 Lupinus albus
Lalb_Chr19g0139031 Lupinus albus
Lj3g0020574 Lotus japonicus
Lsat_1_v5_gn_4_67521 Lactuca sativa
Lsat_1_v5_gn_8_127140 Lactuca sativa
Manes.04G082300 Manihot esculenta
Manes.11G092164 Manihot esculenta
Manes.18G015600 Manihot esculenta
Mapoly0066s0039 Marchantia polymorpha
MD00G1066700 Malus domestica
MD10G1061700 Malus domestica
Medtr4g072130 Medicago truncatula
MELO3C003769.2 Cucumis melo
MELO3C013404.2 Cucumis melo
Migut.B00126 Erythranthe guttata
Migut.N01294 Erythranthe guttata
Nitab4.5_0002096g0010 Nicotiana tabacum
Nn5g29275 Nelumbo nucifera
Nn6g32305 Nelumbo nucifera
Oeu020676.1 Olea europaea
Os04g0117100 Oryza sativa ssp. japonica
Peaxi162Scf00362g01160 Petunia axillaris
Peaxi162Scf00538g00229 Petunia axillaris
PGR042G0239 Punica granatum
PGR142G0584 Punica granatum
PGSC0003DMG400001656 Solanum tuberosum
PGSC0003DMG400004424 Solanum tuberosum
Phvul.011G038100 Phaseolus vulgaris
Potri.002G024900 Populus trichocarpa
Potri.004G164066 Populus trichocarpa
Potri.005G236500 Populus trichocarpa
Potri.009G125832 Populus trichocarpa
Pp3c1_20190 Physcomitrium patens
Pp3c2_20190 Physcomitrium patens
Prupe.1G368600 Prunus persica
Prupe.8G082400 Prunus persica
PSO541G2816 Papaver somniferum
RcHm_v2.0_Chr6g0268521 Rosa chinensis
RcHm_v2.0_Chr6g0302511 Rosa chinensis
Rhsim05G0067400 Rhododendron simsii
Rhsim11G0184800 Rhododendron simsii
Sabra09G0096800 Salix brachista
SalBow3G2817 Salvia bowleyana
SalBow6G3605 Salvia bowleyana
Sc18g0005450 Simmondsia chinensis
Sed0003347 Sechium edule
Sed0012644 Sechium edule
Sed0015314 Sechium edule
Sed0018748 Sechium edule
SMO358G0321 Selaginella moellendorffii
Solyc01g110540.3 Solanum lycopersicum
Sp3g00990 Schrenkiella parvula
Sp6g28750 Schrenkiella parvula
TAR381G0131 Trochodendron aralioides
TAR625G1092 Trochodendron aralioides
TAR628G1422 Trochodendron aralioides
THA.LOC104805479 Tarenaya hassleriana
THA.LOC104821019 Tarenaya hassleriana
THA.LOC109116196 Tarenaya hassleriana
Thecc.02G073200 Theobroma cacao
Thhalv10015231m.g Eutrema salsugineum
Thhalv10021899m.g Eutrema salsugineum
TWI31G1300 Tripterygium wilfordii
TWI75G0908 Tripterygium wilfordii
TWI79G1427 Tripterygium wilfordii
vmacro17409 Vaccinium macrocarpon
VMungo1127G0843 Vigna mungo
Zm00001eb078460 Zea mays
Zm00001eb425810 Zea mays

User provided reference genes

Program Settings