Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p45610 Brassica napus
A07p04930 Brassica napus
Aa31LG8G13390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis
Actinidia00469 Actinidia chinensis
Actinidia17843 Actinidia chinensis
Actinidia27933 Actinidia chinensis
AL3G47650 Arabidopsis lyrata
Aqoxy6G00919 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea
AT2G15860 Arabidopsis thaliana
ATR0733G051 Amborella trichopoda
Atru.chr13.510 Acer truncatum
Atru.chr5.2842 Acer truncatum
Atru.chr8.2606 Acer truncatum
Atru.chr8.2607 Acer truncatum
AUR62011413 Chenopodium quinoa
AUR62016646 Chenopodium quinoa
BcaB03g16336 Brassica carinata
BcaB08g34612 Brassica carinata
BcaC01g03051 Brassica carinata
BcaC06g36093 Brassica carinata
BolC3t17950H Brassica oleracea
BolC7t41207H Brassica oleracea
BraA03t13693Z Brassica rapa
BraA07t28285Z Brassica rapa
C03p56660 Brassica napus
C07p07890 Brassica napus
CAN.G322.72 Capsicum annuum
CAN.G322.73 Capsicum annuum
CANSAT25G1860 Cannabis sativa
CARHR106200 Cardamine hirsuta
Carub.0003s2975 Capsella rubella
Ca_12466_v3 Cicer arietinum L.
Cc02_g18320 Coffea canephora
CDE04G3783 Ceratophyllum demersum
CDE06G1012 Ceratophyllum demersum
Cfa004941 Carpinus fangiana
Ciclev10028431m.g Citrus clementina
CiPaw.06G139500 Carya illinoinensis
ClCG02G005580 Citrullus lanatus
COL.COLO4_11733 Corchorus olitorius
Cpa.g.sc62.69 Carica papaya
Cpa.g.sc62.70 Carica papaya
Cre06.g302850 Chlamydomonas reinhardtii
CsaV3_7G010070 Cucumis sativus L.
CSS0007305 Camellia sinensis var. sinensis
CSS0019035 Camellia sinensis var. sinensis
CSS0036891 Camellia sinensis var. sinensis
DCAR_015855 Daucus carota
DCAR_022069 Daucus carota
Dinv23600 Davidia involucrata
Dinv42115 Davidia involucrata
Duzib052G0890 Durio zibethinus
Duzib132G0866 Durio zibethinus
Duzib248G0025 Durio zibethinus
ECA234G4099 Erigeron canadensis
ECA246G5329 Erigeron canadensis
EL10Ac9g21805 Beta vulgaris
Eucgr.I01207 Eucalyptus grandis
FAN15G1865 Fragaria x ananassa
FAN24G2332 Fragaria x ananassa
FAN27G2465 Fragaria x ananassa
FvH4_2g07090 Fragaria vesca
Glyma.07G180000 Glycine max
Glyma.20G009200 Glycine max
Gohir.A01G005533 Gossypium hirsutum
Gohir.A01G005566 Gossypium hirsutum
Gohir.A12G026800 Gossypium hirsutum
Gohir.D12G026300 Gossypium hirsutum
Gorai.008G026600 Gossypium raimondii
GSVIVG01031842001 Vitis vinifera
HanXRQChr10g0303411 Helianthus annuus
Haze_02467 Corylus avellana
Haze_02469 Corylus avellana
HPP92_019907 Vanilla planifolia
Hund06195 Selenicereus undatus
Lalb_Chr10g0095411 Lupinus albus
Lj2g0017153 Lotus japonicus
Lj5A205G67 Lonicera japonica
Lsat_1_v5_gn_4_111080 Lactuca sativa
Lsat_1_v5_gn_4_68061 Lactuca sativa
Lsat_1_v5_gn_5_117600 Lactuca sativa
Manes.15G144501 Manihot esculenta
Manes.17G095600 Manihot esculenta
Mapoly0087s0083 Marchantia polymorpha
MBI16_g31473_MAGBIO Magnolia biondii
MD05G1073700 Malus domestica
MD10G1088000 Malus domestica
Medtr1g034170 Medicago truncatula
MELO3C018421.2 Cucumis melo
Migut.B00299 Erythranthe guttata
MSTRG.16772 Avicennia marina
MSTRG.20129 Avicennia marina
Nitab4.5_0001401g0100 Nicotiana tabacum
Nitab4.5_0005466g0040 Nicotiana tabacum
Nitab4.5_0009440g0020 Nicotiana tabacum
Nitab4.5_0013034g0040 Nicotiana tabacum
Nn6g32127 Nelumbo nucifera
Oeu021929.4 Olea europaea
Oeu057669.2 Olea europaea
Os03g0737900 Oryza sativa ssp. japonica
Peaxi162Scf00003g02043 Petunia axillaris
PGR142G0866 Punica granatum
PGSC0003DMG400006219 Solanum tuberosum
PGSC0003DMG402025925 Solanum tuberosum
Phvul.003G011700 Phaseolus vulgaris
Potri.009G107800 Populus trichocarpa
Pp3c12_25290 Physcomitrium patens
Pp3c4_2830 Physcomitrium patens
Prupe.8G114000 Prunus persica
Psat0s2233g0240 Pisum sativum
Psat6g096400 Pisum sativum
PSO541G0848 Papaver somniferum
PSO675G8525 Papaver somniferum
QL06p000730 Quercus lobata
QL08p015067 Quercus lobata
QL08p015136 Quercus lobata
QL11p039002 Quercus lobata
QL11p040287 Quercus lobata
RcHm_v2.0_Chr6g0259571 Rosa chinensis
RcHm_v2.0_Chr6g0259581 Rosa chinensis
Rhsim05G0079600 Rhododendron simsii
Sabra09G0082300 Salix brachista
SalBow6G5269 Salvia bowleyana
Sc08g0000210 Simmondsia chinensis
Sc08g0000220 Simmondsia chinensis
Sed0008645 Sechium edule
SEGI_09196 Sequoiadendron giganteum
SEGI_20581 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20600 Striga asiatica
SHI18146 Sapria himalayana
SMO347G0163 Selaginella moellendorffii
Solyc01g108890.3 Solanum lycopersicum
Sopen01g051070 Solanum pennellii
Sopen01g051090 Solanum pennellii
Sp3g29160 Schrenkiella parvula
TAR381G0713 Trochodendron aralioides
TAR625G0829 Trochodendron aralioides
THA.LOC104807346 Tarenaya hassleriana
THA.LOC104819592 Tarenaya hassleriana
Thecc.02G094000 Theobroma cacao
Thhalv10022638m.g Eutrema salsugineum
TPR.G18619 Trifolium pratense
TWI31G1354 Tripterygium wilfordii
TWI79G0508 Tripterygium wilfordii
unitig_21.g20758 Utricularia gibba
vmacro19471 Vaccinium macrocarpon
VMungo1215G1045 Vigna mungo
Zm00001eb056520 Zea mays

User provided reference genes

Program Settings