Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27930 Brassica napus
Aa31sc619G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2582 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2797 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5440 Anthoceros agrestis
Actinidia19286 Actinidia chinensis
Actinidia19589 Actinidia chinensis
Actinidia29636 Actinidia chinensis
Ah.05g166930 Amaranthus hybridus
AL6G41350 Arabidopsis lyrata
Aqoxy6G02958 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4PX4MG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJ07HR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HYM163 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PWJU0J Arachis hypogaea
AT4G07990 Arabidopsis thaliana
ATR0019G011 Amborella trichopoda
Atru.chr13.882 Acer truncatum
AUR62034973 Chenopodium quinoa
AUR62039348 Chenopodium quinoa
BcaB01g02879 Brassica carinata
BcaC01g04783 Brassica carinata
BolC3t15691H Brassica oleracea
BraA03t12006Z Brassica rapa
C03p33720 Brassica napus
CAN.G416.6 Capsicum annuum
CANSAT11G0724 Cannabis sativa
CARHR259230 Cardamine hirsuta
Carub.0006s2656 Capsella rubella
Ca_06989_v3 Cicer arietinum L.
Ca_15883_v3 Cicer arietinum L.
Cc10_g07760 Coffea canephora
CDE02G0400 Ceratophyllum demersum
Cfa013725 Carpinus fangiana
Ciclev10002309m.g Citrus clementina
CiPaw.07G171000 Carya illinoinensis
CiPaw.08G053200 Carya illinoinensis
ClCG08G016760 Citrullus lanatus
COL.COLO4_28448 Corchorus olitorius
Cpa.g.sc160.27 Carica papaya
CsaV3_2G025860 Cucumis sativus L.
CSS0032884 Camellia sinensis var. sinensis
CSS0043183 Camellia sinensis var. sinensis
Dinv39198 Davidia involucrata
Dinv44924 Davidia involucrata
Duzib041G0112 Durio zibethinus
Duzib041G0236 Durio zibethinus
Duzib041G0506 Durio zibethinus
Duzib041G0573 Durio zibethinus
Duzib093G1850 Durio zibethinus
ECA247G0897 Erigeron canadensis
EL10Ac1g02340 Beta vulgaris
Eucgr.F00104 Eucalyptus grandis
Eucgr.F02213 Eucalyptus grandis
FAN15G0694 Fragaria x ananassa
FAN20G0597 Fragaria x ananassa
FAN24G1448 Fragaria x ananassa
FAN27G1358 Fragaria x ananassa
FvH4_2g32490 Fragaria vesca
Glyma.04G048400 Glycine max
Glyma.06G049600 Glycine max
Glyma.14G090500 Glycine max
Glyma.14G121300 Glycine max
Glyma.17G232245 Glycine max
Gohir.A05G212600 Gossypium hirsutum
Gohir.A06G026800 Gossypium hirsutum
Gohir.D05G215800 Gossypium hirsutum
Gohir.D06G024100 Gossypium hirsutum
Gorai.009G222500 Gossypium raimondii
Gorai.010G028600 Gossypium raimondii
GSVIVG01009286001 Vitis vinifera
HanXRQChr04g0110461 Helianthus annuus
HanXRQChr08g0226381 Helianthus annuus
HanXRQChr08g0231951 Helianthus annuus
Haze_22372 Corylus avellana
Hma1.2p1_1230F.1_g268750 Hydrangea macrophylla
HPP92_011732 Vanilla planifolia
HPP92_011733 Vanilla planifolia
HPP92_017696 Vanilla planifolia
HPP92_028656 Vanilla planifolia
Hund05266 Selenicereus undatus
Lalb_Chr23g0267661 Lupinus albus
Lalb_Chr24g0399541 Lupinus albus
Lj1g0006267 Lotus japonicus
Lj4A77G54 Lonicera japonica
Lj5g0016152 Lotus japonicus
Lsat_1_v5_gn_9_79341 Lactuca sativa
Manes.05G184100 Manihot esculenta
Manes.18G050200 Manihot esculenta
Mapoly0001s0190 Marchantia polymorpha
Mapoly0153s0040 Marchantia polymorpha
MBI16_g36640_MAGBIO Magnolia biondii
MD08G1076700 Malus domestica
MD15G1064000 Malus domestica
Medtr1g017260 Medicago truncatula
Medtr3g103520 Medicago truncatula
Medtr3g103530 Medicago truncatula
MELO3C010780.2 Cucumis melo
Migut.C00441 Erythranthe guttata
Migut.N02802 Erythranthe guttata
MSTRG.25014 Avicennia marina
MSTRG.923 Avicennia marina
Nitab4.5_0001494g0140 Nicotiana tabacum
Nitab4.5_0024059g0010 Nicotiana tabacum
Nn6g34543 Nelumbo nucifera
Oeu038874.1 Olea europaea
Oeu048563.2 Olea europaea
Os03g0728100 Oryza sativa ssp. japonica
Os07g0124800 Oryza sativa ssp. japonica
Peaxi162Scf01161g00329 Petunia axillaris
PGR031G3368 Punica granatum
PGR083G2836 Punica granatum
PGSC0003DMG400004945 Solanum tuberosum
Phvul.001G031700 Phaseolus vulgaris
Phvul.L001695 Phaseolus vulgaris
Potri.002G114600 Populus trichocarpa
Potri.005G146600 Populus trichocarpa
Pp3c17_7620 Physcomitrium patens
Prupe.1G418000 Prunus persica
Psat5g042400 Pisum sativum
Psat6g018520 Pisum sativum
PSO541G3106 Papaver somniferum
PSO675G4508 Papaver somniferum
QL09p016104 Quercus lobata
RcHm_v2.0_Chr6g0310161 Rosa chinensis
Rhsim06G0065600 Rhododendron simsii
Rhsim07G0216800 Rhododendron simsii
Sabra02G0090600 Salix brachista
Sabra05G0117000 Salix brachista
Sc02g0008200 Simmondsia chinensis
Sed0005944 Sechium edule
SEGI_07437 Sequoiadendron giganteum
SEGI_24355 Sequoiadendron giganteum
SGA_v2.0_scaffold238G43884 Striga asiatica
SMO351G0516 Selaginella moellendorffii
Solyc04g077430.4 Solanum lycopersicum
Sopen04g031020 Solanum pennellii
Sp6g10230 Schrenkiella parvula
TAR381G1267 Trochodendron aralioides
THA.LOC104799834 Tarenaya hassleriana
Thecc.08G083100 Theobroma cacao
Thhalv10028923m.g Eutrema salsugineum
TPR.G13010 Trifolium pratense
TPR.G30200 Trifolium pratense
TWI36G1081 Tripterygium wilfordii
TWI56G0383 Tripterygium wilfordii
unitig_744.g24118 Utricularia gibba
vmacro04604 Vaccinium macrocarpon
vmacro21405 Vaccinium macrocarpon
VMungo0647G0241 Vigna mungo
VMungo1309G0464 Vigna mungo
Zm00001eb215650 Zea mays
Zm00001eb299310 Zea mays

User provided reference genes

Program Settings