Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42710 Brassica napus
A09p01330 Brassica napus
Aa31LG5G1530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1995 Anthoceros agrestis
Actinidia06392 Actinidia chinensis
Actinidia06394 Actinidia chinensis
Actinidia21354 Actinidia chinensis
AL6G51450 Arabidopsis lyrata
Aqoxy5G02779 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NAX4N2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RS5E8T Arachis hypogaea
AT4G01860 Arabidopsis thaliana
ATR0796G051 Amborella trichopoda
Atru.chr5.899 Acer truncatum
Atru.chr5.900 Acer truncatum
AUR62011731 Chenopodium quinoa
AUR62024565 Chenopodium quinoa
BcaB01g02106 Brassica carinata
BcaC04g24069 Brassica carinata
BolC9t53072H Brassica oleracea
BraA09t35800Z Brassica rapa
C02p62710 Brassica napus
C09p01390 Brassica napus
CAN.G100.30 Capsicum annuum
CANSAT21G0194 Cannabis sativa
CARHR249820 Cardamine hirsuta
Carub.0006s3538 Capsella rubella
Ca_09236_v3 Cicer arietinum L.
Cc01_g21880 Coffea canephora
CDE05G2014 Ceratophyllum demersum
Cfa004881 Carpinus fangiana
Cfa027171 Carpinus fangiana
Ciclev10018506m.g Citrus clementina
CiPaw.07G123600 Carya illinoinensis
ClCG10G011790 Citrullus lanatus
COL.COLO4_23155 Corchorus olitorius
Cpa.g.sc3588.1 Carica papaya
Cpa.g.sc67.77 Carica papaya
Cre04.g217991 Chlamydomonas reinhardtii
CsaV3_3G031590 Cucumis sativus L.
CSS0014565 Camellia sinensis var. sinensis
CSS0019531 Camellia sinensis var. sinensis
DCAR_018250 Daucus carota
Dinv12097 Davidia involucrata
Dinv12098 Davidia involucrata
Duzib138G1217 Durio zibethinus
ECA236G0789 Erigeron canadensis
EL10As5g23578 Beta vulgaris
Eucgr.K00589 Eucalyptus grandis
FAN10G1333 Fragaria x ananassa
FAN14G3945 Fragaria x ananassa
FAN19G2038 Fragaria x ananassa
FAN23G0904 Fragaria x ananassa
FAN24G0870 Fragaria x ananassa
FAN26G0889 Fragaria x ananassa
FAN28G1956 Fragaria x ananassa
FvH4_1g26470 Fragaria vesca
FvH4_2g08080 Fragaria vesca
FvH4_3g18411 Fragaria vesca
FvH4_6g46150 Fragaria vesca
Glyma.19G220100 Glycine max
Gohir.A12G121200 Gossypium hirsutum
Gohir.A12G121250 Gossypium hirsutum
Gohir.D12G125000 Gossypium hirsutum
Gorai.008G136000 Gossypium raimondii
GSVIVG01028203001 Vitis vinifera
HanXRQChr06g0167991 Helianthus annuus
Haze_05120 Corylus avellana
Hma1.2p1_0484F.1_g162880 Hydrangea macrophylla
Hma1.2p1_0484F.1_g162890 Hydrangea macrophylla
HPP92_017301 Vanilla planifolia
Hund09691 Selenicereus undatus
Hund09692 Selenicereus undatus
Lalb_Chr04g0260131 Lupinus albus
Lj1g0015466 Lotus japonicus
Lj2C1214G2 Lonicera japonica
Lsat_1_v5_gn_2_51680 Lactuca sativa
Lsat_1_v5_gn_8_167321 Lactuca sativa
Lsat_1_v5_gn_9_74661 Lactuca sativa
Manes.05G010600 Manihot esculenta
Mapoly0020s0127 Marchantia polymorpha
MBI12_g07471_MAGBIO Magnolia biondii
MBI13_g10212_MAGBIO Magnolia biondii
MBI14_g17170_MAGBIO Magnolia biondii
MBI14_g40313_MAGBIO Magnolia biondii
MBI15_g23571_MAGBIO Magnolia biondii
MBI18_g09625_MAGBIO Magnolia biondii
MBI19_g30553_MAGBIO Magnolia biondii
MCO01G012 Micromonas commoda
MD09G1293000 Malus domestica
MD17G1281300 Malus domestica
MD17G1281400 Malus domestica
MD17G1281500 Malus domestica
MD17G1281700 Malus domestica
MD17G1281800 Malus domestica
Medtr7g110260 Medicago truncatula
MELO3C012913.2 Cucumis melo
Migut.D00025 Erythranthe guttata
Migut.D00026 Erythranthe guttata
MSTRG.21726 Avicennia marina
Nitab4.5_0000222g0280 Nicotiana tabacum
Nitab4.5_0002994g0090 Nicotiana tabacum
Nn3g21885 Nelumbo nucifera
Oeu044752.1 Olea europaea
Oeu044753.1 Olea europaea
Os03g0111800 Oryza sativa ssp. japonica
PGR142G2149 Punica granatum
Phvul.001G216500 Phaseolus vulgaris
Potri.002G189400 Populus trichocarpa
Pp3c3_23690 Physcomitrium patens
PRCOL_00001957 Prasinoderma coloniale
Prupe.3G004200 Prunus persica
Psat0s2464g0040 Pisum sativum
Psat3g018400 Pisum sativum
Psat4g129960 Pisum sativum
PSO170G6261 Papaver somniferum
PSO357G0647 Papaver somniferum
QL12p034348 Quercus lobata
RcHm_v2.0_Chr3g0486381 Rosa chinensis
RcHm_v2.0_Chr3g0486491 Rosa chinensis
RcHm_v2.0_Chr3g0486501 Rosa chinensis
RcHm_v2.0_Chr3g0486511 Rosa chinensis
RcHm_v2.0_Chr3g0486521 Rosa chinensis
RcHm_v2.0_Chr3g0486531 Rosa chinensis
Rhsim13G0000700 Rhododendron simsii
Sabra02G0166300 Salix brachista
Sc18g0007580 Simmondsia chinensis
Sed0025982 Sechium edule
SEGI_09896 Sequoiadendron giganteum
SEGI_19859 Sequoiadendron giganteum
SEGI_21204 Sequoiadendron giganteum
SEGI_37781 Sequoiadendron giganteum
SEGI_39451 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25689 Striga asiatica
SHI15443 Sapria himalayana
SHI15445 Sapria himalayana
SMO137G0268 Selaginella moellendorffii
SMO200G0280 Selaginella moellendorffii
Solyc01g068070.4 Solanum lycopersicum
Sopen01g030000 Solanum pennellii
Sp6g01700 Schrenkiella parvula
TAR362G0253 Trochodendron aralioides
THA.LOC104825930 Tarenaya hassleriana
Thecc.01G322600 Theobroma cacao
Thhalv10027621m.g Eutrema salsugineum
TPR.G4131 Trifolium pratense
TWI14G1319 Tripterygium wilfordii
unitig_62.g23902 Utricularia gibba
vmacro02367 Vaccinium macrocarpon
vmacro02368 Vaccinium macrocarpon
VMungo1383G1823 Vigna mungo
Zm00001eb241980 Zea mays
Zm00001eb404090 Zea mays

User provided reference genes

Program Settings