Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p09400 Brassica napus
A05p09440 Brassica napus
A05p09490 Brassica napus
Aa31LG5G21540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3607 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3838 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3223 Anthoceros agrestis
Actinidia18582 Actinidia chinensis
Ah.04g163730 Amaranthus hybridus
AL4G32520 Arabidopsis lyrata
AL4G34350 Arabidopsis lyrata
AL4G34360 Arabidopsis lyrata
Aqoxy4G02860 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9JEX28 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RW77QZ Arachis hypogaea
AT2G36360 Arabidopsis thaliana
ATR0820G085 Amborella trichopoda
Atru.chr12.976 Acer truncatum
AUR62035490 Chenopodium quinoa
AUR62041546 Chenopodium quinoa
BcaB02g09358 Brassica carinata
BcaC02g11751 Brassica carinata
BolC4t22822H Brassica oleracea
BraA05t19899Z Brassica rapa
C04p11750 Brassica napus
CAN.G534.16 Capsicum annuum
CANSAT56G2003 Cannabis sativa
CARHR130660 Cardamine hirsuta
Carub.0004s1815 Capsella rubella
Ca_10498_v3 Cicer arietinum L.
CBR_g30411 Chara braunii
Cc02_g09980 Coffea canephora
Ciclev10031499m.g Citrus clementina
CiPaw.13G037200 Carya illinoinensis
ClCG05G021650 Citrullus lanatus
COL.COLO4_20964 Corchorus olitorius
Cpa.g.c36770 Carica papaya
Cpa.g.sc19.17 Carica papaya
Cre07.g320200 Chlamydomonas reinhardtii
Cre10.g433150 Chlamydomonas reinhardtii
CsaV3_5G035620 Cucumis sativus L.
CsaV3_7G016260 Cucumis sativus L.
CSS0021630 Camellia sinensis var. sinensis
CSS0050047 Camellia sinensis var. sinensis
DCAR_028402 Daucus carota
Dinv20809 Davidia involucrata
Duzib106G1880 Durio zibethinus
Duzib114G0297 Durio zibethinus
ECA232G3125 Erigeron canadensis
EL10Ac4g08666 Beta vulgaris
Eucgr.G02708 Eucalyptus grandis
FAN04G1536 Fragaria x ananassa
FAN08G1494 Fragaria x ananassa
FAN08G1717 Fragaria x ananassa
FAN18G3489 Fragaria x ananassa
FAN21G2933 Fragaria x ananassa
FvH4_2g12621 Fragaria vesca
FvH4_5g38020 Fragaria vesca
FvH4_5g38190 Fragaria vesca
FvH4_7g05461 Fragaria vesca
Glyma.20G187700 Glycine max
Gohir.A12G091000 Gossypium hirsutum
Gohir.D12G091000 Gossypium hirsutum
Gorai.008G098400 Gossypium raimondii
GSVIVG01034738001 Vitis vinifera
HanXRQChr05g0146831 Helianthus annuus
Haze_02592 Corylus avellana
Hma1.2p1_0352F.1_g133000 Hydrangea macrophylla
Hma1.2p1_0352F.1_g133010 Hydrangea macrophylla
HPP92_025130 Vanilla planifolia
HPP92_026096 Vanilla planifolia
Hund06767 Selenicereus undatus
Hund06768 Selenicereus undatus
Hund06921 Selenicereus undatus
Lalb_Chr02g0151411 Lupinus albus
Lj2A29T80 Lonicera japonica
Lj5g0024267 Lotus japonicus
Lsat_1_v5_gn_0_7340 Lactuca sativa
Lsat_1_v5_gn_1_19021 Lactuca sativa
Lsat_1_v5_gn_3_126940 Lactuca sativa
Lsat_1_v5_gn_4_48181 Lactuca sativa
Lsat_1_v5_gn_9_14041 Lactuca sativa
Manes.07G089701 Manihot esculenta
Mapoly0004s0085 Marchantia polymorpha
Mapoly0052s0089 Marchantia polymorpha
Mapoly0095s0051 Marchantia polymorpha
MBI17_g00711_MAGBIO Magnolia biondii
MCO03G163 Micromonas commoda
MD02G1248400 Malus domestica
MD07G1067800 Malus domestica
Medtr1g492850 Medicago truncatula
MELO3C012363.2 Cucumis melo
Migut.F00896 Erythranthe guttata
Nitab4.5_0000962g0070 Nicotiana tabacum
Nitab4.5_0005390g0010 Nicotiana tabacum
Nn6g35016 Nelumbo nucifera
Oeu015034.1 Olea europaea
Oeu030502.1 Olea europaea
Os03g0835800 Oryza sativa ssp. japonica
Peaxi162Scf00244g01123 Petunia axillaris
PGR142G2585 Punica granatum
PGSC0003DMG400019479 Solanum tuberosum
Phvul.007G104300 Phaseolus vulgaris
Potri.008G024700 Populus trichocarpa
Pp3c12_16110 Physcomitrium patens
Pp3c12_16113 Physcomitrium patens
Pp3c18_17400 Physcomitrium patens
Pp3c19_14210 Physcomitrium patens
Pp3c21_1430 Physcomitrium patens
Pp3c22_17590 Physcomitrium patens
PRCOL_00000996 Prasinoderma coloniale
PRCOL_00004908 Prasinoderma coloniale
PRCOL_00005556 Prasinoderma coloniale
Prupe.2G084800 Prunus persica
Psat6g176720 Pisum sativum
QL02p046024 Quercus lobata
QL04p042558 Quercus lobata
QL04p042573 Quercus lobata
QL04p042639 Quercus lobata
QL04p042697 Quercus lobata
QL05p033200 Quercus lobata
RcHm_v2.0_Chr1g0333031 Rosa chinensis
RcHm_v2.0_Chr1g0333101 Rosa chinensis
RcHm_v2.0_Chr1g0333111 Rosa chinensis
RcHm_v2.0_Chr1g0333981 Rosa chinensis
RcHm_v2.0_Chr1g0333991 Rosa chinensis
Rhsim03G0105000 Rhododendron simsii
Sabra08G0016600 Salix brachista
SalBow6G1224 Salvia bowleyana
Sc06g0002220 Simmondsia chinensis
Sed0005221 Sechium edule
SEGI_24067 Sequoiadendron giganteum
SEGI_24836 Sequoiadendron giganteum
SEGI_30675 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21351 Striga asiatica
SHI21282 Sapria himalayana
SHI21283 Sapria himalayana
SMO165G0011 Selaginella moellendorffii
SMO174G0255 Selaginella moellendorffii
SMO356G0306 Selaginella moellendorffii
Solyc11g007320.2 Solanum lycopersicum
Sopen11g003210 Solanum pennellii
Sp4g18640 Schrenkiella parvula
TAR636G0640 Trochodendron aralioides
TAR636G3234 Trochodendron aralioides
Thecc.10G104900 Theobroma cacao
Thhalv10017936m.g Eutrema salsugineum
TPR.G2503 Trifolium pratense
unitig_0.g851 Utricularia gibba
vmacro07229 Vaccinium macrocarpon
VMungo0720G0319 Vigna mungo
VMungo0720G0771 Vigna mungo
Zm00001eb063700 Zea mays

User provided reference genes

Program Settings