Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p02560 Brassica napus
Aa31LG5G2750 Aethionema arabicum
Actinidia06956 Actinidia chinensis
Actinidia11660 Actinidia chinensis
Actinidia16374 Actinidia chinensis
Actinidia23987 Actinidia chinensis
AL6G49680 Arabidopsis lyrata
Aqoxy2G00360 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.45FEHG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B45LBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9AU08 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QINW4M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZK4BTX Arachis hypogaea
AT4G03250 Arabidopsis thaliana
ATR0745G080 Amborella trichopoda
Atru.chr3.2780 Acer truncatum
Atru.chr3.2781 Acer truncatum
AUR62000181 Chenopodium quinoa
AUR62006532 Chenopodium quinoa
BcaB01g01963 Brassica carinata
BcaC04g23987 Brassica carinata
BolC9t53190H Brassica oleracea
BraA09t35902Z Brassica rapa
C09p02620 Brassica napus
CAN.G575.98 Capsicum annuum
CANSAT54G0995 Cannabis sativa
CARHR251700 Cardamine hirsuta
Carub.0006s3381 Capsella rubella
Ca_06218_v3 Cicer arietinum L.
Ca_25925_v3 Cicer arietinum L.
Ca_29949_v3 Cicer arietinum L.
Cc02_g33420 Coffea canephora
Ciclev10014928m.g Citrus clementina
CiPaw.13G151800 Carya illinoinensis
CiPaw.14G113900 Carya illinoinensis
ClCG02G022910 Citrullus lanatus
COL.COLO4_05197 Corchorus olitorius
CsaV3_6G039040 Cucumis sativus L.
CSS0013669 Camellia sinensis var. sinensis
CSS0046494 Camellia sinensis var. sinensis
DCAR_023844 Daucus carota
Dinv05059 Davidia involucrata
Duzib150G0464 Durio zibethinus
Duzib168G0471 Durio zibethinus
Duzib168G1750 Durio zibethinus
ECA238G3426 Erigeron canadensis
EL10Ac4g10128 Beta vulgaris
EL10Ac4g10133 Beta vulgaris
EL10Ac4g10134 Beta vulgaris
EL10Ac4g10153 Beta vulgaris
EL10Ac4g10157 Beta vulgaris
Eucgr.J00701 Eucalyptus grandis
FAN11G1822 Fragaria x ananassa
FAN16G0786 Fragaria x ananassa
FAN21G2036 Fragaria x ananassa
FAN25G2744 Fragaria x ananassa
FvH4_3g27990 Fragaria vesca
Glyma.02G280300 Glycine max
Glyma.04G126201 Glycine max
Glyma.08G301700 Glycine max
Glyma.14G034300 Glycine max
Glyma.18G118400 Glycine max
Gohir.A07G120700 Gossypium hirsutum
Gohir.A08G010000 Gossypium hirsutum
Gohir.A13G219300 Gossypium hirsutum
Gohir.D07G125000 Gossypium hirsutum
Gohir.D08G020100 Gossypium hirsutum
Gohir.D13G223000 Gossypium hirsutum
Gorai.001G134800 Gossypium raimondii
Gorai.004G014700 Gossypium raimondii
Gorai.013G254100 Gossypium raimondii
GSVIVG01037260001 Vitis vinifera
HanXRQChr14g0432391 Helianthus annuus
Haze_23219 Corylus avellana
Hma1.2p1_0382F.1_g140110 Hydrangea macrophylla
Hund07444 Selenicereus undatus
Hund21986 Selenicereus undatus
Lalb_Chr04g0249181 Lupinus albus
Lalb_Chr10g0106321 Lupinus albus
Lalb_Chr17g0347981 Lupinus albus
Lj1A288G35 Lonicera japonica
Lj1A295G40 Lonicera japonica
Lj1C295G12 Lonicera japonica
LjContig00049g0025092 Lotus japonicus
Lsat_1_v5_gn_2_33621 Lactuca sativa
Manes.01G179900 Manihot esculenta
Manes.02G140500 Manihot esculenta
Mapoly0029s0015 Marchantia polymorpha
MBI13_g32777_MAGBIO Magnolia biondii
MD03G1167600 Malus domestica
MD11G1186500 Malus domestica
Medtr3g045830 Medicago truncatula
Medtr5g089870 Medicago truncatula
MELO3C014565.2 Cucumis melo
Migut.D00653 Erythranthe guttata
Migut.N02368 Erythranthe guttata
MSTRG.12447 Avicennia marina
MSTRG.18457 Avicennia marina
Nitab4.5_0001290g0060 Nicotiana tabacum
Nitab4.5_0002310g0050 Nicotiana tabacum
Nitab4.5_0002726g0010 Nicotiana tabacum
Nitab4.5_0004018g0080 Nicotiana tabacum
Nn7g36662 Nelumbo nucifera
Nn7g37333 Nelumbo nucifera
Oeu025900.1 Olea europaea
Oeu030627.1 Olea europaea
Oeu043281.1 Olea europaea
Peaxi162Scf00004g00419 Petunia axillaris
PGR102G1223 Punica granatum
PGR119G1869 Punica granatum
PGSC0003DMG400004714 Solanum tuberosum
PGSC0003DMG400031247 Solanum tuberosum
Phvul.006G030100 Phaseolus vulgaris
Phvul.008G200400 Phaseolus vulgaris
Potri.001G276800 Populus trichocarpa
Potri.009G071700 Populus trichocarpa
Prupe.4G267700 Prunus persica
Psat2g019840 Pisum sativum
PSO339G5168 Papaver somniferum
PSO384G3775 Papaver somniferum
QL01p017473 Quercus lobata
RcHm_v2.0_Chr5g0050681 Rosa chinensis
Rhsim13G0211200 Rhododendron simsii
Sabra09G0054000 Salix brachista
Sabra16G0170900 Salix brachista
Sc09g0000980 Simmondsia chinensis
Sed0009012 Sechium edule
Sed0021712 Sechium edule
SEGI_24421 Sequoiadendron giganteum
SEGI_25603 Sequoiadendron giganteum
SEGI_26148 Sequoiadendron giganteum
SGA_v2.0_scaffold164G38125 Striga asiatica
SGA_v2.0_scaffold29G12262 Striga asiatica
SGA_v2.0_scaffold496G52466 Striga asiatica
SHI27519 Sapria himalayana
Solyc11g065110.2 Solanum lycopersicum
Solyc12g099760.2 Solanum lycopersicum
Sopen11g024850 Solanum pennellii
Sopen12g034390 Solanum pennellii
Sp6g03290 Schrenkiella parvula
TAR633G2565 Trochodendron aralioides
TAR636G2671 Trochodendron aralioides
THA.LOC104806525 Tarenaya hassleriana
Thecc.09G249900 Theobroma cacao
Thhalv10028592m.g Eutrema salsugineum
TPR.G19341 Trifolium pratense
TPR.G8469 Trifolium pratense
TWI75G1175 Tripterygium wilfordii
unitig_27.g25005 Utricularia gibba
unitig_699.g19143 Utricularia gibba
vmacro04022 Vaccinium macrocarpon
VMungo0540G2372 Vigna mungo
VMungo0647G2208 Vigna mungo

User provided reference genes

Program Settings