Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p06470 Brassica napus
Aa31LG5G19660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis
Actinidia29677 Actinidia chinensis
Actinidia33944 Actinidia chinensis
Ah.05g175410 Amaranthus hybridus
Ah.10g036410 Amaranthus hybridus
Ah.16g103100 Amaranthus hybridus
AL4G37530 Arabidopsis lyrata
Aqoxy2G00978 Aquilegia oxysepala
Aqoxy4G02663 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea
AT2G39950 Arabidopsis thaliana
ATR0618G022 Amborella trichopoda
ATR0618G087 Amborella trichopoda
ATR0723G011 Amborella trichopoda
Atru.chr12.242 Acer truncatum
AUR62012206 Chenopodium quinoa
AUR62022839 Chenopodium quinoa
BcaB01g03581 Brassica carinata
BcaB02g09066 Brassica carinata
BolC4t22372H Brassica oleracea
BraA05t19615Z Brassica rapa
C04p07550 Brassica napus
CAN.G853.43 Capsicum annuum
CARHR134870 Cardamine hirsuta
Carub.0004s2208 Capsella rubella
Ca_05931_v3 Cicer arietinum L.
CBR_g37391 Chara braunii
Cc02_g06920 Coffea canephora
CDE02G2339 Ceratophyllum demersum
CDE09G0712 Ceratophyllum demersum
Ciclev10030877m.g Citrus clementina
CiPaw.01G295700 Carya illinoinensis
CiPaw.02G189800 Carya illinoinensis
ClCG11G006350 Citrullus lanatus
COL.COLO4_25659 Corchorus olitorius
CsaV3_6G001640 Cucumis sativus L.
CSS0019944 Camellia sinensis var. sinensis
DCAR_027553 Daucus carota
Dinv20955 Davidia involucrata
Dinv20988 Davidia involucrata
Dinv34423 Davidia involucrata
Duzib106G0751 Durio zibethinus
Duzib114G0963 Durio zibethinus
ECA238G1534 Erigeron canadensis
ECA238G2978 Erigeron canadensis
EL10Ac2g04786 Beta vulgaris
Eucgr.G03032 Eucalyptus grandis
FAN01G2868 Fragaria x ananassa
FAN03G1683 Fragaria x ananassa
FAN06G0754 Fragaria x ananassa
FAN10G3438 Fragaria x ananassa
FvH4_7g24020 Fragaria vesca
Glyma.02G254400 Glycine max
Glyma.14G062000 Glycine max
Gohir.A06G164600 Gossypium hirsutum
Gohir.A10G229600 Gossypium hirsutum
Gohir.D06G170100 Gossypium hirsutum
Gohir.D10G243800 Gossypium hirsutum
Gorai.010G199100 Gossypium raimondii
Gorai.011G280200 Gossypium raimondii
GSVIVG01016366001 Vitis vinifera
HanXRQChr06g0174351 Helianthus annuus
HanXRQChr07g0200671 Helianthus annuus
HanXRQChr08g0222261 Helianthus annuus
HanXRQChr14g0459971 Helianthus annuus
Haze_17182 Corylus avellana
Haze_17183 Corylus avellana
HPP92_018194 Vanilla planifolia
Hund13832 Selenicereus undatus
Hund15980 Selenicereus undatus
Lalb_Chr04g0250791 Lupinus albus
Lalb_Chr17g0346601 Lupinus albus
Lalb_Chr17g0346611 Lupinus albus
Lj1C950G18 Lonicera japonica
LjContig00357g0026481 Lotus japonicus
Lsat_1_v5_gn_2_121900 Lactuca sativa
Lsat_1_v5_gn_8_12421 Lactuca sativa
Manes.07G125400 Manihot esculenta
Manes.10G017800 Manihot esculenta
Mapoly0096s0071 Marchantia polymorpha
MBI14_g36885_MAGBIO Magnolia biondii
MD01G1147200 Malus domestica
MD07G1214200 Malus domestica
MD12G1168400 Malus domestica
Medtr5g081880 Medicago truncatula
MELO3C008275.2 Cucumis melo
Migut.F01427 Erythranthe guttata
Nitab4.5_0000737g0020 Nicotiana tabacum
Nitab4.5_0002100g0120 Nicotiana tabacum
Nitab4.5_0003720g0010 Nicotiana tabacum
Nitab4.5_0004338g0050 Nicotiana tabacum
Nn2g11386 Nelumbo nucifera
Nn2g13619 Nelumbo nucifera
Oeu021121.1 Olea europaea
Oeu022381.1 Olea europaea
Oeu036630.1 Olea europaea
Oeu043075.1 Olea europaea
Oeu055830.1 Olea europaea
Oeu059752.1 Olea europaea
Oeu059753.1 Olea europaea
Oeu061605.1 Olea europaea
Os07g0100500 Oryza sativa ssp. japonica
Peaxi162Scf00401g00118 Petunia axillaris
PGR142G0174 Punica granatum
PGSC0003DMG400027178 Solanum tuberosum
Phvul.008G226400 Phaseolus vulgaris
Potri.008G064500 Populus trichocarpa
Potri.010G192800 Populus trichocarpa
Pp3c26_8620 Physcomitrium patens
Prupe.2G246100 Prunus persica
Psat2g035600 Pisum sativum
PSO339G2633 Papaver somniferum
PSO801G0450 Papaver somniferum
QL08p062653 Quercus lobata
RcHm_v2.0_Chr1g0313541 Rosa chinensis
RcHm_v2.0_Chr1g0369361 Rosa chinensis
RcHm_v2.0_Chr1g0369401 Rosa chinensis
Rhsim03G0140100 Rhododendron simsii
Sabra08G0047400 Salix brachista
Sabra10G0148400 Salix brachista
SalBow6G1361 Salvia bowleyana
SalBow6G1823 Salvia bowleyana
SalBow6G4818 Salvia bowleyana
Sc11g0006970 Simmondsia chinensis
Sc11g0006990 Simmondsia chinensis
Sc11g0007270 Simmondsia chinensis
Sed0002029 Sechium edule
Sed0010788 Sechium edule
SGA_v2.0_scaffold343G49443 Striga asiatica
SGA_v2.0_scaffold76G25081 Striga asiatica
SHI03525 Sapria himalayana
SHI03526 Sapria himalayana
SMO358G0301 Selaginella moellendorffii
Solyc05g052630.4 Solanum lycopersicum
Sopen05g031160 Solanum pennellii
Sp4g22260 Schrenkiella parvula
TAR369G0441 Trochodendron aralioides
TAR623G1028 Trochodendron aralioides
THA.LOC104824306 Tarenaya hassleriana
Thecc.10G026200 Theobroma cacao
Thhalv10017559m.g Eutrema salsugineum
TPR.G40368 Trifolium pratense
TPR.G8038 Trifolium pratense
TWI53G0900 Tripterygium wilfordii
unitig_52.g16836 Utricularia gibba
vmacro06995 Vaccinium macrocarpon
VMungo0647G1582 Vigna mungo
Zm00001eb057510 Zea mays
Zm00001eb297980 Zea mays

User provided reference genes

Program Settings