Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13810 Brassica napus
A10p13030 Brassica napus
Aa31LG3G11710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1044 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis
Actinidia05003 Actinidia chinensis
Actinidia30402 Actinidia chinensis
Ah.05g180060 Amaranthus hybridus
AL8G31370 Arabidopsis lyrata
Aqoxy4G03118 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea
AT5G55810 Arabidopsis thaliana
ATR0090G032 Amborella trichopoda
ATR0787G217 Amborella trichopoda
Atru.chr13.2016 Acer truncatum
Atru.chr9.1539 Acer truncatum
AUR62004423 Chenopodium quinoa
AUR62022629 Chenopodium quinoa
BcaB01g04372 Brassica carinata
BcaB08g35939 Brassica carinata
BcaC01g06393 Brassica carinata
BcaC04g20199 Brassica carinata
BolC3t14047H Brassica oleracea
BolC9t57526H Brassica oleracea
BraA03t10684Z Brassica rapa
BraA10t43397Z Brassica rapa
C03p16250 Brassica napus
C09p46750 Brassica napus
CAN.G623.13 Capsicum annuum
CAN.G849.12 Capsicum annuum
CANSAT11G2385 Cannabis sativa
CARHR269130 Cardamine hirsuta
CARHR269180 Cardamine hirsuta
Carub.0005s0937 Capsella rubella
Carub.0005s0950 Capsella rubella
Carub.0008s1616 Capsella rubella
Ca_06397_v3 Cicer arietinum L.
Cc00_g18290 Coffea canephora
Cfa020188 Carpinus fangiana
Cfa025186 Carpinus fangiana
Ciclev10009329m.g Citrus clementina
CiPaw.12G138400 Carya illinoinensis
ClCG10G004450 Citrullus lanatus
COL.COLO4_09836 Corchorus olitorius
Cpa.g.sc26.30 Carica papaya
Cre14.g626950 Chlamydomonas reinhardtii
CsaV3_3G004240 Cucumis sativus L.
CSS0002120 Camellia sinensis var. sinensis
DCAR_000844 Daucus carota
DCAR_013232 Daucus carota
Dinv10336 Davidia involucrata
Duzib213G0036 Durio zibethinus
Duzib268G0855 Durio zibethinus
ECA234G1395 Erigeron canadensis
ECA234G3028 Erigeron canadensis
ECA240G4670 Erigeron canadensis
EL10Ac1g00340 Beta vulgaris
EL10Ac1g00341 Beta vulgaris
Eucgr.F03688 Eucalyptus grandis
FAN14G1154 Fragaria x ananassa
FAN16G0962 Fragaria x ananassa
FAN16G1285 Fragaria x ananassa
FAN21G3052 Fragaria x ananassa
FAN24G2452 Fragaria x ananassa
FAN25G0449 Fragaria x ananassa
FvH4_3g11630 Fragaria vesca
Glyma.02G300600 Glycine max
Glyma.14G013400 Glycine max
Glyma.17G150300 Glycine max
Glyma.19G097900 Glycine max
Gohir.A08G025200 Gossypium hirsutum
Gohir.D08G035700 Gossypium hirsutum
Gorai.004G033700 Gossypium raimondii
GSVIVG01014691001 Vitis vinifera
HanXRQChr03g0074031 Helianthus annuus
Haze_09828 Corylus avellana
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla
HPP92_025829 Vanilla planifolia
Hund27237 Selenicereus undatus
Lalb_Chr09g0322761 Lupinus albus
Lj1C890G11 Lonicera japonica
Lj1g0004670 Lotus japonicus
Lj3g0007860 Lotus japonicus
LjContig00081g0004731 Lotus japonicus
Lsat_1_v5_gn_4_137701 Lactuca sativa
Lsat_1_v5_gn_9_89740 Lactuca sativa
Manes.03G141600 Manihot esculenta
Mapoly0011s0011 Marchantia polymorpha
MD05G1261800 Malus domestica
MD10G1240100 Malus domestica
Medtr3g007850 Medicago truncatula
Medtr5g095960 Medicago truncatula
MELO3C014119.2 Cucumis melo
Migut.E01275 Erythranthe guttata
Migut.F01027 Erythranthe guttata
MSTRG.27026 Avicennia marina
Nitab4.5_0002736g0040 Nicotiana tabacum
Nitab4.5_0007415g0050 Nicotiana tabacum
Nn1g07520 Nelumbo nucifera
Oeu037059.1 Olea europaea
Os02g0814900 Oryza sativa ssp. japonica
Os09g0347900 Oryza sativa ssp. japonica
Peaxi162Scf00139g01316 Petunia axillaris
PGR142G3095 Punica granatum
PGSC0003DMG400022170 Solanum tuberosum
Phvul.008G279200 Phaseolus vulgaris
Potri.005G032300 Populus trichocarpa
Potri.013G021900 Populus trichocarpa
Pp3c10_25720 Physcomitrium patens
Pp3c13_13680 Physcomitrium patens
Pp3c20_23380 Physcomitrium patens
Pp3c3_17230 Physcomitrium patens
PRCOL_00003123 Prasinoderma coloniale
Prupe.3G149500 Prunus persica
Prupe.4G103800 Prunus persica
Psat2g007280 Pisum sativum
PSO063G7513 Papaver somniferum
PSO170G0902 Papaver somniferum
PSO832G0973 Papaver somniferum
QL08p004083 Quercus lobata
RcHm_v2.0_Chr5g0018651 Rosa chinensis
RcHm_v2.0_Chr7g0241681 Rosa chinensis
Rhsim04G0012600 Rhododendron simsii
Rhsim06G0229900 Rhododendron simsii
Sabra05G0034900 Salix brachista
SalBow4G0417 Salvia bowleyana
Sc16g0008090 Simmondsia chinensis
Sed0016007 Sechium edule
SEGI_01519 Sequoiadendron giganteum
SEGI_06932 Sequoiadendron giganteum
SEGI_22417 Sequoiadendron giganteum
SEGI_37983 Sequoiadendron giganteum
SMO364G0361 Selaginella moellendorffii
Solyc07g065590.4 Solanum lycopersicum
Sopen07g033800 Solanum pennellii
Sp6g17690 Schrenkiella parvula
TAR624G1110 Trochodendron aralioides
TAR626G0989 Trochodendron aralioides
THA.LOC104811668 Tarenaya hassleriana
Thecc.07G013300 Theobroma cacao
Thhalv10015421m.g Eutrema salsugineum
TPR.G8592 Trifolium pratense
TWI38G2348 Tripterygium wilfordii
unitig_0.g252 Utricularia gibba
vmacro11591 Vaccinium macrocarpon
VMungo0647G2576 Vigna mungo
Zm00001eb191530 Zea mays

User provided reference genes

Program Settings