Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p04970 Brassica napus
A09p37440 Brassica napus
A09p66160 Brassica napus
Aa31LG3G15940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis
Actinidia19087 Actinidia chinensis
Actinidia34948 Actinidia chinensis
Ah.08g213760 Amaranthus hybridus
AL1G18110 Arabidopsis lyrata
Aqoxy3G01788 Aquilegia oxysepala
Aqoxy3G02494 Aquilegia oxysepala
Aqoxy5G00387 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea
AT1G07830 Arabidopsis thaliana
ATR0796G060 Amborella trichopoda
Atru.chr9.2421 Acer truncatum
AUR62008830 Chenopodium quinoa
AUR62025410 Chenopodium quinoa
BcaB02g06631 Brassica carinata
BcaB02g06722 Brassica carinata
BcaC02g11004 Brassica carinata
BcaC07g41973 Brassica carinata
BcaC07g42500 Brassica carinata
BolC3t13075H Brassica oleracea
BolC8t52561H Brassica oleracea
BraA06t23701Z Brassica rapa
BraA09t41954Z Brassica rapa
C04p22280 Brassica napus
C08p50320 Brassica napus
CANSAT80G2080 Cannabis sativa
CARHR007640 Cardamine hirsuta
Carub.0005s0629 Capsella rubella
Ca_29688_v3 Cicer arietinum L.
CBR_g30055 Chara braunii
Cc00_g03600 Coffea canephora
Cc00_g07690 Coffea canephora
Cc00_g30360 Coffea canephora
CDE01G0824 Ceratophyllum demersum
Cfa019082 Carpinus fangiana
Cfa024847 Carpinus fangiana
Ciclev10022742m.g Citrus clementina
CiPaw.11G030400 Carya illinoinensis
ClCG06G016810 Citrullus lanatus
COL.COLO4_24762 Corchorus olitorius
Cpa.g.sc110.33 Carica papaya
Cpa.g.sc170.28 Carica papaya
CsaV3_1G001710 Cucumis sativus L.
CSS0004783 Camellia sinensis var. sinensis
CSS0033619 Camellia sinensis var. sinensis
DCAR_016496 Daucus carota
DCAR_021562 Daucus carota
Dinv25814 Davidia involucrata
Duzib068G0850 Durio zibethinus
ECA232G0284 Erigeron canadensis
ECA246G1319 Erigeron canadensis
EL10Ac7g17734 Beta vulgaris
Eucgr.B00348 Eucalyptus grandis
Eucgr.H04858 Eucalyptus grandis
FAN04G1836 Fragaria x ananassa
FAN08G2523 Fragaria x ananassa
FAN13G0264 Fragaria x ananassa
FAN18G4009 Fragaria x ananassa
FvH4_5g16620 Fragaria vesca
Glyma.04G171700 Glycine max
Glyma.06G192200 Glycine max
Gohir.A12G276300 Gossypium hirsutum
Gohir.D12G276900 Gossypium hirsutum
Gorai.008G297400 Gossypium raimondii
GSVIVG01007807001 Vitis vinifera
HanXRQChr05g0155531 Helianthus annuus
HanXRQChr05g0163301 Helianthus annuus
HanXRQChr05g0163571 Helianthus annuus
Haze_07452 Corylus avellana
Haze_07453 Corylus avellana
Haze_26898 Corylus avellana
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla
HPP92_014441 Vanilla planifolia
Hund18328 Selenicereus undatus
Lalb_Chr23g0265291 Lupinus albus
LjContig00081g0027263 Lotus japonicus
Lsat_1_v5_gn_5_17000 Lactuca sativa
Manes.12G158200 Manihot esculenta
Manes.15G185900 Manihot esculenta
Mapoly0009s0030 Marchantia polymorpha
MBI18_g21823_MAGBIO Magnolia biondii
MBI19_g12136_MAGBIO Magnolia biondii
MCO15G004 Micromonas commoda
MD06G1178500 Malus domestica
MD14G1184900 Malus domestica
Medtr5g015850 Medicago truncatula
MELO3C017111.2 Cucumis melo
Migut.D01783 Erythranthe guttata
MSTRG.23103 Avicennia marina
Nitab4.5_0000003g0430 Nicotiana tabacum
Nitab4.5_0000499g0020 Nicotiana tabacum
Nitab4.5_0001422g0100 Nicotiana tabacum
Nitab4.5_0008768g0020 Nicotiana tabacum
Nn2g12605 Nelumbo nucifera
Oeu026523.1 Olea europaea
Os06g0128500 Oryza sativa ssp. japonica
Peaxi162Scf00017g02344 Petunia axillaris
Peaxi162Scf00689g00332 Petunia axillaris
PGR083G1798 Punica granatum
PGSC0003DMG400024483 Solanum tuberosum
Phvul.009G188900 Phaseolus vulgaris
Potri.002G185800 Populus trichocarpa
Potri.014G111100 Populus trichocarpa
Pp3c14_16960 Physcomitrium patens
Pp3c17_20320 Physcomitrium patens
PRCOL_00002926 Prasinoderma coloniale
Prupe.5G177600 Prunus persica
Psat2g170440 Pisum sativum
PSO170G0191 Papaver somniferum
PSO782G1633 Papaver somniferum
QL03p066954 Quercus lobata
QL03p067058 Quercus lobata
QL10p013461 Quercus lobata
RcHm_v2.0_Chr2g0130991 Rosa chinensis
RcHm_v2.0_Chr3g0484341 Rosa chinensis
RcHm_v2.0_Chr3g0484351 Rosa chinensis
RcHm_v2.0_Chr3g0484411 Rosa chinensis
RcHm_v2.0_Chr7g0179521 Rosa chinensis
Rhsim08G0169000 Rhododendron simsii
Rhsim12G0162600 Rhododendron simsii
SalBow2G1273 Salvia bowleyana
Sc12g0005500 Simmondsia chinensis
Sc16g0001640 Simmondsia chinensis
Sed0010100 Sechium edule
SEGI_23384 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31844 Striga asiatica
SHI01130 Sapria himalayana
SHI01132 Sapria himalayana
SMO228G0088 Selaginella moellendorffii
Solyc03g114050.3 Solanum lycopersicum
Sopen03g033100 Solanum pennellii
Sp1g06517 Schrenkiella parvula
TAR362G1012 Trochodendron aralioides
THA.LOC104818227 Tarenaya hassleriana
THA.LOC104821462 Tarenaya hassleriana
Thecc.03G006700 Theobroma cacao
Thhalv10009035m.g Eutrema salsugineum
Thhalv10014955m.g Eutrema salsugineum
TPR.G20968 Trifolium pratense
TPR.G6374 Trifolium pratense
TWI32G0003 Tripterygium wilfordii
TWI75G1644 Tripterygium wilfordii
unitig_27.g24928 Utricularia gibba
vmacro16596 Vaccinium macrocarpon
VMungo1309G2385 Vigna mungo
Zm00001eb378540 Zea mays

User provided reference genes

Program Settings