Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19730 Brassica napus
A03p58010 Brassica napus
A08p20130 Brassica napus
Aa31LG10G480 Aethionema arabicum
Aa31LG2G22170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis
Actinidia11029 Actinidia chinensis
Ah.08g215280 Amaranthus hybridus
AL7G24290 Arabidopsis lyrata
Aqoxy4G01981 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea
AT1G52270 Arabidopsis thaliana
AT4G28310 Arabidopsis thaliana
ATR0124G030 Amborella trichopoda
Atru.chr6.2990 Acer truncatum
AUR62022461 Chenopodium quinoa
AUR62040063 Chenopodium quinoa
BcaB03g12566 Brassica carinata
BcaC02g09254 Brassica carinata
BcaC06g32627 Brassica carinata
BcaC06g32628 Brassica carinata
BcaC07g38324 Brassica carinata
BcaC08g44096 Brassica carinata
BcaC09g50492 Brassica carinata
BcaNung01357 Brassica carinata
BcaNung01577 Brassica carinata
BolC1t02426H Brassica oleracea
BolC2t11588H Brassica oleracea
BolC3t18785H Brassica oleracea
BolC7t46088H Brassica oleracea
BolC8t48753H Brassica oleracea
BraA01t01904Z Brassica rapa
BraA03t14864Z Brassica rapa
BraA08t33972Z Brassica rapa
C01p24790 Brassica napus
C07p56130 Brassica napus
C08p10790 Brassica napus
CAN.G578.5 Capsicum annuum
CARHR236030 Cardamine hirsuta
Carub.0007s1244 Capsella rubella
Ca_01496_v3 Cicer arietinum L.
Cc05_g07190 Coffea canephora
Cfa014619 Carpinus fangiana
Ciclev10016785m.g Citrus clementina
CiPaw.03G177800 Carya illinoinensis
ClCG00G003550 Citrullus lanatus
ClCG07G002870 Citrullus lanatus
COL.COLO4_30200 Corchorus olitorius
Cpa.g.sc34.169 Carica papaya
Cpa.g.sc34.170 Carica papaya
CsaV3_7G004470 Cucumis sativus L.
CSS0019593 Camellia sinensis var. sinensis
CSS0042810 Camellia sinensis var. sinensis
DCAR_013013 Daucus carota
Dinv23632 Davidia involucrata
Dinv26411 Davidia involucrata
Duzib132G1264 Durio zibethinus
Duzib248G0607 Durio zibethinus
ECA234G0944 Erigeron canadensis
EL10Ac9g20770 Beta vulgaris
Eucgr.A01822 Eucalyptus grandis
FAN02G2956 Fragaria x ananassa
FAN05G0487 Fragaria x ananassa
FAN09G3815 Fragaria x ananassa
FvH4_6g26250 Fragaria vesca
Glyma.12G204500 Glycine max
Glyma.12G204600 Glycine max
Glyma.13G296700 Glycine max
Glyma.13G296800 Glycine max
Gohir.A03G156300 Gossypium hirsutum
Gohir.A04G103500 Gossypium hirsutum
Gohir.D02G179400 Gossypium hirsutum
Gohir.D04G142900 Gossypium hirsutum
Gorai.005G201200 Gossypium raimondii
Gorai.012G128300 Gossypium raimondii
GSVIVG01020552001 Vitis vinifera
HanXRQChr17g0559281 Helianthus annuus
Haze_13169 Corylus avellana
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla
HPP92_008364 Vanilla planifolia
Lalb_Chr14g0366971 Lupinus albus
Lalb_Chr24g0399901 Lupinus albus
Lj1P721T18 Lonicera japonica
Lj3g0028176 Lotus japonicus
Lsat_1_v5_gn_8_135921 Lactuca sativa
Lsat_1_v5_gn_8_135941 Lactuca sativa
Manes.13G146300 Manihot esculenta
Mapoly0078s0017 Marchantia polymorpha
MBI18_g28947_MAGBIO Magnolia biondii
MD17G1239900 Malus domestica
Medtr2g090385 Medicago truncatula
MELO3C018732.2 Cucumis melo
Migut.M00296 Erythranthe guttata
MSTRG.12824 Avicennia marina
MSTRG.14326 Avicennia marina
MSTRG.14327 Avicennia marina
Nitab4.5_0000585g0130 Nicotiana tabacum
Nitab4.5_0000638g0250 Nicotiana tabacum
Nitab4.5_0000893g0100 Nicotiana tabacum
Nitab4.5_0011784g0010 Nicotiana tabacum
Nitab4.5_0014741g0010 Nicotiana tabacum
Oeu019133.1 Olea europaea
Os06g0115700 Oryza sativa ssp. japonica
Peaxi162Scf00059g00194 Petunia axillaris
Peaxi162Scf00132g00008 Petunia axillaris
PGR042G3918 Punica granatum
PGSC0003DMG400013144 Solanum tuberosum
PGSC0003DMG400018341 Solanum tuberosum
Phvul.004G108100 Phaseolus vulgaris
Phvul.004G108200 Phaseolus vulgaris
Potri.013G130700 Populus trichocarpa
Pp3c14_12710 Physcomitrium patens
Pp3c17_13330 Physcomitrium patens
Prupe.3G132500 Prunus persica
Psat5g270840 Pisum sativum
Psat5g272360 Pisum sativum
PSO170G5688 Papaver somniferum
PSO357G0555 Papaver somniferum
QL08p038965 Quercus lobata
RcHm_v2.0_Chr2g0126621 Rosa chinensis
Rhsim06G0141800 Rhododendron simsii
Sabra13G0110300 Salix brachista
SalBow1G0370 Salvia bowleyana
SalBow1G1046 Salvia bowleyana
SalBow1G6004 Salvia bowleyana
SalBow4G0268 Salvia bowleyana
SalBow7G4382 Salvia bowleyana
Sc21g0002890 Simmondsia chinensis
Sed0002865 Sechium edule
Sed0013547 Sechium edule
SEGI_29524 Sequoiadendron giganteum
SEGI_40945 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13950 Striga asiatica
SGA_v2.0_scaffold70G23526 Striga asiatica
SHI10398 Sapria himalayana
Solyc07g053950.1 Solanum lycopersicum
Solyc10g008320.1 Solanum lycopersicum
Sopen07g027930 Solanum pennellii
Sopen10g004180 Solanum pennellii
Sp7g26270 Schrenkiella parvula
TAR626G1782 Trochodendron aralioides
THA.LOC104824700 Tarenaya hassleriana
Thecc.02G180400 Theobroma cacao
Thhalv10027270m.g Eutrema salsugineum
TPR.G1736 Trifolium pratense
TPR.G6396 Trifolium pratense
TWI36G1772 Tripterygium wilfordii
unitig_37.g12306 Utricularia gibba
unitig_46.g18595 Utricularia gibba
vmacro12308 Vaccinium macrocarpon
VMungo0464G0320 Vigna mungo
VMungo0464G1438 Vigna mungo
Zm00001eb269130 Zea mays

User provided reference genes

Program Settings