Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p02480 Brassica napus
Aa31LG10G3600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis
Actinidia11672 Actinidia chinensis
Actinidia16344 Actinidia chinensis
Actinidia23978 Actinidia chinensis
Ah.06g193930 Amaranthus hybridus
AL1G59340 Arabidopsis lyrata
Aqoxy1G00230 Aquilegia oxysepala
Aqoxy2G00222 Aquilegia oxysepala
Aqoxy3G02211 Aquilegia oxysepala
Aqoxy3G03849 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea
AT1G51450 Arabidopsis thaliana
ATR0733G130 Amborella trichopoda
Atru.chr3.2667 Acer truncatum
AUR62000146 Chenopodium quinoa
AUR62019327 Chenopodium quinoa
BcaB07g33593 Brassica carinata
BcaC08g43313 Brassica carinata
BolC6t35774H Brassica oleracea
BraA06t23454Z Brassica rapa
C06p06610 Brassica napus
CAN.G717.4 Capsicum annuum
CANSAT54G0946 Cannabis sativa
CARHR041620 Cardamine hirsuta
Carub.0001s4032 Capsella rubella
Ca_18973_v3 Cicer arietinum L.
Ca_29677_v3 Cicer arietinum L.
CBR_g19286 Chara braunii
CBR_g54627 Chara braunii
CBR_g54630 Chara braunii
Cc01_g04890 Coffea canephora
CDE02G1762 Ceratophyllum demersum
CDE02G2983 Ceratophyllum demersum
CDE06G1612 Ceratophyllum demersum
Cfa009790 Carpinus fangiana
Ciclev10014796m.g Citrus clementina
CiPaw.13G156600 Carya illinoinensis
CiPaw.13G157500 Carya illinoinensis
CiPaw.14G117300 Carya illinoinensis
ClCG03G013100 Citrullus lanatus
COL.COLO4_28767 Corchorus olitorius
Cpa.g.sc84.33 Carica papaya
Cre16.g670250 Chlamydomonas reinhardtii
CsaV3_1G042960 Cucumis sativus L.
CSS0012701 Camellia sinensis var. sinensis
CSS0044227 Camellia sinensis var. sinensis
DCAR_029965 Daucus carota
Dinv22162 Davidia involucrata
Dinv36236 Davidia involucrata
Duzib170G0427 Durio zibethinus
ECA248G3299 Erigeron canadensis
EL10Ac4g10215 Beta vulgaris
Eucgr.B03708 Eucalyptus grandis
Eucgr.J00747 Eucalyptus grandis
FAN11G3886 Fragaria x ananassa
FAN16G3639 Fragaria x ananassa
FAN21G1390 Fragaria x ananassa
FvH4_3g28490 Fragaria vesca
Glyma.11G093700 Glycine max
Glyma.12G020200 Glycine max
Gohir.A09G112900 Gossypium hirsutum
Gohir.D09G109400 Gossypium hirsutum
Gorai.006G127000 Gossypium raimondii
GSVIVG01025234001 Vitis vinifera
HanXRQChr01g0023561 Helianthus annuus
Haze_23164 Corylus avellana
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla
HPP92_012324 Vanilla planifolia
HPP92_012392 Vanilla planifolia
Hund07473 Selenicereus undatus
Hund22004 Selenicereus undatus
Lalb_Chr01g0001051 Lupinus albus
Lalb_Chr03g0024481 Lupinus albus
Lj1A320G11 Lonicera japonica
Lj3g0024081 Lotus japonicus
Lsat_1_v5_gn_1_77340 Lactuca sativa
Manes.14G004000 Manihot esculenta
Mapoly0036s0095 Marchantia polymorpha
MBI17_g23181_MAGBIO Magnolia biondii
MBI19_g09239_MAGBIO Magnolia biondii
MD03G1172400 Malus domestica
MD11G1190300 Malus domestica
Medtr4g076980 Medicago truncatula
MELO3C015173.2 Cucumis melo
Migut.D00622 Erythranthe guttata
Migut.L00239 Erythranthe guttata
Migut.L00817 Erythranthe guttata
Migut.L00818 Erythranthe guttata
Migut.N02340 Erythranthe guttata
MSTRG.12462 Avicennia marina
MSTRG.18441 Avicennia marina
Nitab4.5_0002451g0050 Nicotiana tabacum
Nitab4.5_0006617g0070 Nicotiana tabacum
Nn2g15211 Nelumbo nucifera
Nn7g36315 Nelumbo nucifera
Oeu025884.1 Olea europaea
Os11g0145700 Oryza sativa ssp. japonica
Os11g0146500 Oryza sativa ssp. japonica
Os12g0143200 Oryza sativa ssp. japonica
Peaxi162Scf00004g00318 Petunia axillaris
PGR119G1354 Punica granatum
PGR142G0717 Punica granatum
PGSC0003DMG400029996 Solanum tuberosum
Phvul.011G022800 Phaseolus vulgaris
Potri.001G256000 Populus trichocarpa
Potri.009G051400 Populus trichocarpa
Pp3c12_10080 Physcomitrium patens
Pp3c23_9320 Physcomitrium patens
PRCOL_00001849 Prasinoderma coloniale
Prupe.4G254200 Prunus persica
Psat7g172280 Pisum sativum
Psat7g172360 Pisum sativum
PSO339G1463 Papaver somniferum
PSO339G4480 Papaver somniferum
PSO384G3237 Papaver somniferum
QL01p004191 Quercus lobata
QL06p032345 Quercus lobata
QL93p0275_0020 Quercus lobata
RcHm_v2.0_Chr5g0052831 Rosa chinensis
Rhsim01G0192400 Rhododendron simsii
Rhsim13G0218000 Rhododendron simsii
Sabra09G0037500 Salix brachista
SalBow8G4383 Salvia bowleyana
Sc16g0011300 Simmondsia chinensis
Sed0009811 Sechium edule
Sed0024369 Sechium edule
SEGI_00529 Sequoiadendron giganteum
SGA_v2.0_scaffold42G16076 Striga asiatica
SHI29796 Sapria himalayana
SMO361G0750 Selaginella moellendorffii
Solyc11g065370.3 Solanum lycopersicum
Sopen11g025150 Solanum pennellii
Sp1g38120 Schrenkiella parvula
TAR623G0783 Trochodendron aralioides
TAR633G1546 Trochodendron aralioides
THA.LOC104817914 Tarenaya hassleriana
Thecc.09G237700 Theobroma cacao
Thhalv10011431m.g Eutrema salsugineum
TPR.G13744 Trifolium pratense
TPR.G8938 Trifolium pratense
TWI32G1158 Tripterygium wilfordii
TWI60G0872 Tripterygium wilfordii
unitig_27.g24997 Utricularia gibba
unitig_60.g25644 Utricularia gibba
unitig_60.g25645 Utricularia gibba
vmacro04134 Vaccinium macrocarpon
vmacro14270 Vaccinium macrocarpon
VMungo1127G0838 Vigna mungo
Zm00001eb092900 Zea mays
Zm00001eb115730 Zea mays
Zm00001eb287480 Zea mays

User provided reference genes

Program Settings