Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p09140 Brassica napus
Aa31LG11G11240 Aethionema arabicum
Aa31LG1G16340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis
Actinidia36405 Actinidia chinensis
Ah.03g139580 Amaranthus hybridus
AL8G43440 Arabidopsis lyrata
Aqoxy5G00233 Aquilegia oxysepala
Aqoxy6G02400 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P6WLKW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R82CC3 Arachis hypogaea
AT5G65720 Arabidopsis thaliana
ATR1120G045 Amborella trichopoda
Atru.chr3.1085 Acer truncatum
AUR62007967 Chenopodium quinoa
BcaB04g20026 Brassica carinata
BcaC01g02817 Brassica carinata
BcaC04g23250 Brassica carinata
BolC3t18259H Brassica oleracea
BolC9t53963H Brassica oleracea
BraA09t36565Z Brassica rapa
C03p59950 Brassica napus
C09p10650 Brassica napus
CAN.G1061.4 Capsicum annuum
CAN.G529.24 Capsicum annuum
CAN.G541.23 Capsicum annuum
CANSAT01G0390 Cannabis sativa
CARHR279720 Cardamine hirsuta
Carub.0008s2662 Capsella rubella
Ca_24663_v3 Cicer arietinum L.
CBR_g17075 Chara braunii
CBR_g17082 Chara braunii
CBR_g8345 Chara braunii
Cc07_g07590 Coffea canephora
CDE01G0270 Ceratophyllum demersum
CDE02G1131 Ceratophyllum demersum
Cfa006794 Carpinus fangiana
Cfa026265 Carpinus fangiana
Ciclev10025572m.g Citrus clementina
CiPaw.07G039300 Carya illinoinensis
ClCG01G017940 Citrullus lanatus
COL.COLO4_11645 Corchorus olitorius
Cpa.g.sc129.49 Carica papaya
Cre02.g146250 Chlamydomonas reinhardtii
Cre07.g322000 Chlamydomonas reinhardtii
CsaV3_6G044470 Cucumis sativus L.
CSS0039666 Camellia sinensis var. sinensis
CSS0047287 Camellia sinensis var. sinensis
DCAR_010778 Daucus carota
Dinv23067 Davidia involucrata
Dinv26978 Davidia involucrata
Duzib147G0087 Durio zibethinus
Duzib160G0718 Durio zibethinus
Duzib187G1710 Durio zibethinus
ECA234G3987 Erigeron canadensis
ECA240G3001 Erigeron canadensis
EL10Ac6g14948 Beta vulgaris
Eucgr.I00651 Eucalyptus grandis
FAN04G2432 Fragaria x ananassa
FAN11G3064 Fragaria x ananassa
FAN23G2833 Fragaria x ananassa
FAN26G2906 Fragaria x ananassa
FAN28G1552 Fragaria x ananassa
FvH4_1g18610 Fragaria vesca
FvH4_3g39110 Fragaria vesca
FvH4_4g11530 Fragaria vesca
Glyma.01G197100 Glycine max
Glyma.11G044600 Glycine max
Gohir.A05G255700 Gossypium hirsutum
Gohir.A12G081500 Gossypium hirsutum
Gohir.D05G257400 Gossypium hirsutum
Gohir.D12G078300 Gossypium hirsutum
Gorai.008G087200 Gossypium raimondii
Gorai.009G268800 Gossypium raimondii
GSVIVG01003606001 Vitis vinifera
GSVIVG01008311001 Vitis vinifera
HanXRQChr14g0447641 Helianthus annuus
HanXRQChr14g0447651 Helianthus annuus
HanXRQChr14g0461401 Helianthus annuus
Haze_03962 Corylus avellana
Haze_27134 Corylus avellana
Hma1.2p1_0424F.1_g150270 Hydrangea macrophylla
Hma1.2p1_0477F.1_g160960 Hydrangea macrophylla
Hma1.2p1_1953F.1_g308840 Hydrangea macrophylla
HPP92_019516 Vanilla planifolia
HPP92_019567 Vanilla planifolia
HPP92_019568 Vanilla planifolia
Lalb_Chr09g0323791 Lupinus albus
Lalb_Chr16g0379061 Lupinus albus
Lj2C425T5 Lonicera japonica
Lj2g0010705 Lotus japonicus
Lsat_1_v5_gn_2_81541 Lactuca sativa
Manes.12G119000 Manihot esculenta
Mapoly0184s0007 Marchantia polymorpha
MBI11_g19461_MAGBIO Magnolia biondii
MBI11_g39360_MAGBIO Magnolia biondii
MCO07G690 Micromonas commoda
MCO10G007 Micromonas commoda
MD15G1303800 Malus domestica
Medtr5g014820 Medicago truncatula
MELO3C007668.2 Cucumis melo
Migut.H00312 Erythranthe guttata
MSTRG.23646 Avicennia marina
Nitab4.5_0000396g0100 Nicotiana tabacum
Nitab4.5_0006325g0030 Nicotiana tabacum
Nn4g24745 Nelumbo nucifera
Nn5g30704 Nelumbo nucifera
Oeu014312.1 Olea europaea
Os09g0338400 Oryza sativa ssp. japonica
Peaxi162Scf00096g01526 Petunia axillaris
Peaxi162Scf00854g00110 Petunia axillaris
PGR004G2229 Punica granatum
PGSC0003DMG400030629 Solanum tuberosum
Phvul.002G008200 Phaseolus vulgaris
Potri.007G000600 Populus trichocarpa
Pp3c1_20380 Physcomitrium patens
Pp3c2_20850 Physcomitrium patens
PRCOL_00005106 Prasinoderma coloniale
Prupe.6G213300 Prunus persica
Psat2g172800 Pisum sativum
PSO063G7095 Papaver somniferum
PSO170G1369 Papaver somniferum
PSO210G2597 Papaver somniferum
PSO782G2535 Papaver somniferum
QL02p060631 Quercus lobata
QL06p038221 Quercus lobata
RcHm_v2.0_Chr2g0109351 Rosa chinensis
RcHm_v2.0_Chr2g0109391 Rosa chinensis
RcHm_v2.0_Chr5g0045361 Rosa chinensis
Sabra07G0000600 Salix brachista
Sabra08G0002600 Salix brachista
SalBow3G1292 Salvia bowleyana
SalBow3G2368 Salvia bowleyana
SalBow3G3135 Salvia bowleyana
Sc07g0000270 Simmondsia chinensis
Sed0020912 Sechium edule
SEGI_09827 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33084 Striga asiatica
SGA_v2.0_scaffold269G46256 Striga asiatica
SMO172G0132 Selaginella moellendorffii
Solyc02g091900.4 Solanum lycopersicum
Sopen02g036470 Solanum pennellii
Sp2g28820 Schrenkiella parvula
TAR381G1547 Trochodendron aralioides
TAR628G0926 Trochodendron aralioides
THA.LOC104798404 Tarenaya hassleriana
THA.LOC104800063 Tarenaya hassleriana
THA.LOC104817643 Tarenaya hassleriana
Thecc.01G079500 Theobroma cacao
Thhalv10004176m.g Eutrema salsugineum
TPR.G28859 Trifolium pratense
TWI63G0151 Tripterygium wilfordii
VMungo1215G0536 Vigna mungo
Zm00001eb310290 Zea mays

User provided reference genes

Program Settings