Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11270 Brassica napus
A07p33770 Brassica napus
Aa31LG2G3430 Aethionema arabicum
Aa31LG9G17140 Aethionema arabicum
Actinidia15890 Actinidia chinensis
Ah.06g188560 Amaranthus hybridus
Ah.16g101690 Amaranthus hybridus
AL2G25370 Arabidopsis lyrata
AL7G52500 Arabidopsis lyrata
Aqoxy3G00247 Aquilegia oxysepala
AT1G67035 Arabidopsis thaliana
AT5G38300 Arabidopsis thaliana
ATR0752G028 Amborella trichopoda
Atru.chr1.1662 Acer truncatum
AUR62009011 Chenopodium quinoa
AUR62023290 Chenopodium quinoa
AUR62043981 Chenopodium quinoa
BcaB05g24226 Brassica carinata
BcaB06g27183 Brassica carinata
BcaC02g09641 Brassica carinata
BcaC03g14785 Brassica carinata
BcaNung06250 Brassica carinata
BolC2t08386H Brassica oleracea
BolC4t26077H Brassica oleracea
BolC6t39123H Brassica oleracea
BraA02t06447Z Brassica rapa
BraA04t16787Z Brassica rapa
BraA07t31003Z Brassica rapa
C02p22330 Brassica napus
C04p44990 Brassica napus
C06p43160 Brassica napus
CAN.G1425.14 Capsicum annuum
CAN.G358.61 Capsicum annuum
CAN.G358.89 Capsicum annuum
CAN.G625.30 Capsicum annuum
CANSAT78G0274 Cannabis sativa
CARHR059450 Cardamine hirsuta
CARHR214290 Cardamine hirsuta
Carub.0002s1332 Capsella rubella
Carub.0005s1274 Capsella rubella
Ca_04370_v3 Cicer arietinum L.
Ca_08078_v3 Cicer arietinum L.
Cc07_g08730 Coffea canephora
Cfa007915 Carpinus fangiana
Ciclev10012794m.g Citrus clementina
CiPaw.03G062800 Carya illinoinensis
CiPaw.04G043000 Carya illinoinensis
ClCG05G012330 Citrullus lanatus
COL.COLO4_09348 Corchorus olitorius
Cpa.g.sc170.57 Carica papaya
CsaV3_3G020240 Cucumis sativus L.
DCAR_025909 Daucus carota
Duzib133G0847 Durio zibethinus
Duzib138G0938 Durio zibethinus
Duzib211G0180 Durio zibethinus
Eucgr.J01506 Eucalyptus grandis
FAN02G3195 Fragaria x ananassa
FAN05G2248 Fragaria x ananassa
FAN09G4185 Fragaria x ananassa
FAN14G2363 Fragaria x ananassa
FAN14G5069 Fragaria x ananassa
FvH4_6g36230 Fragaria vesca
Glyma.08G366700 Glycine max
Glyma.13G045200 Glycine max
Glyma.18G295700 Glycine max
Glyma.19G049900 Glycine max
Gohir.A07G174000 Gossypium hirsutum
Gohir.A11G163900 Gossypium hirsutum
Gohir.A12G054400 Gossypium hirsutum
Gohir.D11G170200 Gossypium hirsutum
Gohir.D11G325700 Gossypium hirsutum
Gohir.D11G325800 Gossypium hirsutum
Gohir.D11G325975 Gossypium hirsutum
Gohir.D11G326300 Gossypium hirsutum
Gohir.D12G053200 Gossypium hirsutum
Gorai.001G202200 Gossypium raimondii
Gorai.007G182000 Gossypium raimondii
Gorai.007G356700 Gossypium raimondii
Gorai.008G056400 Gossypium raimondii
HanXRQChr11g0325401 Helianthus annuus
HanXRQChr11g0330661 Helianthus annuus
Haze_14167 Corylus avellana
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla
HPP92_021866 Vanilla planifolia
Lalb_Chr02g0158191 Lupinus albus
Lalb_Chr10g0091311 Lupinus albus
Lj1g0003158 Lotus japonicus
Lj2g0010000 Lotus japonicus
Lsat_1_v5_gn_4_154580 Lactuca sativa
Manes.01G111300 Manihot esculenta
Manes.02G069600 Manihot esculenta
MBI09_g07740_MAGBIO Magnolia biondii
MBI09_g36997_MAGBIO Magnolia biondii
MD09G1253700 Malus domestica
MD17G1245500 Malus domestica
Medtr6g018780 Medicago truncatula
Medtr7g082230 Medicago truncatula
MELO3C023735.2 Cucumis melo
Migut.L00330 Erythranthe guttata
MSTRG.3555 Avicennia marina
Nitab4.5_0000912g0060 Nicotiana tabacum
Nitab4.5_0004416g0090 Nicotiana tabacum
Nn3g17899 Nelumbo nucifera
Oeu016627.1 Olea europaea
Oeu039734.1 Olea europaea
Oeu050378.1 Olea europaea
Peaxi162Scf00394g00712 Petunia axillaris
PGR004G2449 Punica granatum
PGR042G3836 Punica granatum
PGSC0003DMG402026390 Solanum tuberosum
Phvul.004G066100 Phaseolus vulgaris
Phvul.008G007200 Phaseolus vulgaris
Potri.004G098200 Populus trichocarpa
Potri.017G116100 Populus trichocarpa
Prupe.3G143600 Prunus persica
Psat1g081000 Pisum sativum
Psat3g098240 Pisum sativum
PSO532G0010 Papaver somniferum
PSO541G1476 Papaver somniferum
PSO541G4271 Papaver somniferum
QL02p051034 Quercus lobata
QL12p016552 Quercus lobata
RcHm_v2.0_Chr2g0148201 Rosa chinensis
Rhsim10G0068600 Rhododendron simsii
Sabra04G0081300 Salix brachista
Sabra17G0096100 Salix brachista
SalBow3G3444 Salvia bowleyana
SalBow5G0757 Salvia bowleyana
SalBow7G1622 Salvia bowleyana
SalBow7G4115 Salvia bowleyana
Sc11g0008370 Simmondsia chinensis
Sed0015257 Sechium edule
SGA_v2.0_scaffold115G32104 Striga asiatica
Solyc02g086140.2 Solanum lycopersicum
Sopen02g030830 Solanum pennellii
Sp5g21970 Schrenkiella parvula
Sp7g03720 Schrenkiella parvula
TAR371G0696 Trochodendron aralioides
TAR622G0902 Trochodendron aralioides
TAR629G1480 Trochodendron aralioides
THA.LOC104805574 Tarenaya hassleriana
THA.LOC104822635 Tarenaya hassleriana
Thecc.04G132300 Theobroma cacao
Thecc.07G096700 Theobroma cacao
Thhalv10019032m.g Eutrema salsugineum
Thhalv10027906m.g Eutrema salsugineum
TPR.G31528 Trifolium pratense
TPR.G32442 Trifolium pratense
TWI53G1522 Tripterygium wilfordii
TWI77G0518 Tripterygium wilfordii
unitig_32.g11886 Utricularia gibba
unitig_748.g8746 Utricularia gibba
VMungo0464G1679 Vigna mungo
VMungo1383G1737 Vigna mungo

User provided reference genes

Program Settings