Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p31690 Brassica napus
A06p44670 Brassica napus
A09p23220 Brassica napus
Aa31sc79G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2774 Anthoceros agrestis
Actinidia31991 Actinidia chinensis
Actinidia33630 Actinidia chinensis
Ah.03g138420 Amaranthus hybridus
AL5G10060 Arabidopsis lyrata
Aqoxy5G03876 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9SFQ4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B80FEM Arachis hypogaea
AT2G01110 Arabidopsis thaliana
ATR0691G049 Amborella trichopoda
Atru.chr11.334 Acer truncatum
Atru.chr11.341 Acer truncatum
AUR62002773 Chenopodium quinoa
AUR62037257 Chenopodium quinoa
BcaB07g30424 Brassica carinata
BcaC03g16992 Brassica carinata
BcaC03g16998 Brassica carinata
BcaC04g21603 Brassica carinata
BcaC06g31333 Brassica carinata
BcaC06g34216 Brassica carinata
BolC2t10985H Brassica oleracea
BolC2t10997H Brassica oleracea
BolC7t43697H Brassica oleracea
BolC9t55859H Brassica oleracea
BraA02t08175Z Brassica rapa
BraA06t27340Z Brassica rapa
BraA09t37925Z Brassica rapa
C02p49070 Brassica napus
C07p31580 Brassica napus
C09p29960 Brassica napus
CAN.G1489.14 Capsicum annuum
CANSAT01G0565 Cannabis sativa
CARHR143660 Cardamine hirsuta
Carub.0005s0009 Capsella rubella
Ca_23704_v3 Cicer arietinum L.
Ca_30211_v3 Cicer arietinum L.
CBR_g19219 Chara braunii
Cc11_g09270 Coffea canephora
CDE06G2233 Ceratophyllum demersum
CDE07G0253 Ceratophyllum demersum
Cfa015814 Carpinus fangiana
Ciclev10015744m.g Citrus clementina
CiPaw.05G245300 Carya illinoinensis
ClCG05G022340 Citrullus lanatus
COL.COLO4_20120 Corchorus olitorius
Cpa.g.sc65.92 Carica papaya
Cre03.g145887 Chlamydomonas reinhardtii
CsaV3_5G034760 Cucumis sativus L.
CSS0006530 Camellia sinensis var. sinensis
DCAR_007276 Daucus carota
DCAR_030186 Daucus carota
Dinv04904 Davidia involucrata
Dinv16165 Davidia involucrata
Duzib251G0273 Durio zibethinus
Duzib268G0539 Durio zibethinus
ECA234G2688 Erigeron canadensis
ECA246G3704 Erigeron canadensis
EL10Ac4g08742 Beta vulgaris
EL10Ac6g14275 Beta vulgaris
Eucgr.B02866 Eucalyptus grandis
FAN07G1519 Fragaria x ananassa
FAN12G0017 Fragaria x ananassa
FAN12G0914 Fragaria x ananassa
FAN17G0450 Fragaria x ananassa
FAN22G0499 Fragaria x ananassa
FvH4_4g26390 Fragaria vesca
Glyma.10G268000 Glycine max
Glyma.20G123100 Glycine max
Gohir.A12G142300 Gossypium hirsutum
Gohir.D12G147200 Gossypium hirsutum
Gorai.008G158400 Gossypium raimondii
GSVIVG01011805001 Vitis vinifera
HanXRQChr01g0013251 Helianthus annuus
HanXRQChr15g0477711 Helianthus annuus
HanXRQChr17g0567091 Helianthus annuus
Haze_00684 Corylus avellana
Hma1.2p1_0114F.1_g055470 Hydrangea macrophylla
HPP92_020138 Vanilla planifolia
HPP92_021566 Vanilla planifolia
HPP92_027135 Vanilla planifolia
Hund25018 Selenicereus undatus
Lalb_Chr02g0145631 Lupinus albus
Lalb_Chr06g0165741 Lupinus albus
Lj3A877T98 Lonicera japonica
Lj5g0022431 Lotus japonicus
Lj6A750T92 Lonicera japonica
Lsat_1_v5_gn_3_54000 Lactuca sativa
Lsat_1_v5_gn_4_15760 Lactuca sativa
Manes.06G063100 Manihot esculenta
Manes.14G109500 Manihot esculenta
Mapoly0010s0061 Marchantia polymorpha
MBI16_g29821_MAGBIO Magnolia biondii
MCO02G003 Micromonas commoda
MD13G1032500 Malus domestica
MD16G1034600 Malus domestica
Medtr1g109080 Medicago truncatula
MELO3C012288.2 Cucumis melo
Migut.E00392 Erythranthe guttata
Migut.L01019 Erythranthe guttata
MSTRG.13564 Avicennia marina
Nitab4.5_0000350g0140 Nicotiana tabacum
Nitab4.5_0013146g0030 Nicotiana tabacum
Nn4g24023 Nelumbo nucifera
Oeu022847.1 Olea europaea
Oeu029170.1 Olea europaea
Oeu048392.1 Olea europaea
Os01g0501700 Oryza sativa ssp. japonica
Peaxi162Scf00205g01022 Petunia axillaris
PGR102G0643 Punica granatum
PGSC0003DMG400030563 Solanum tuberosum
Phvul.007G034300 Phaseolus vulgaris
Potri.010G117200 Populus trichocarpa
Pp3c3_36440 Physcomitrium patens
Pp3c8_3800 Physcomitrium patens
PRCOL_00000588 Prasinoderma coloniale
Prupe.1G320000 Prunus persica
Psat6g222720 Pisum sativum
PSO170G3473 Papaver somniferum
PSO445G0020 Papaver somniferum
QL01p003046 Quercus lobata
RcHm_v2.0_Chr4g0434021 Rosa chinensis
Rhsim12G0088300 Rhododendron simsii
Sabra10G0086800 Salix brachista
Sabra10G0088400 Salix brachista
SalBow8G4147 Salvia bowleyana
SalBow8G5373 Salvia bowleyana
Sc04g0005890 Simmondsia chinensis
Sed0004857 Sechium edule
SEGI_17562 Sequoiadendron giganteum
SEGI_19547 Sequoiadendron giganteum
SEGI_30482 Sequoiadendron giganteum
SEGI_31512 Sequoiadendron giganteum
SGA_v2.0_scaffold376G50295 Striga asiatica
SMO119G0095 Selaginella moellendorffii
Solyc05g008530.3 Solanum lycopersicum
Sopen05g004370 Solanum pennellii
Sp2g12580 Schrenkiella parvula
TAR374G0638 Trochodendron aralioides
TAR622G1294 Trochodendron aralioides
THA.LOC104805049 Tarenaya hassleriana
Thecc.02G215600 Theobroma cacao
Thhalv10000946m.g Eutrema salsugineum
TPR.G4856 Trifolium pratense
TWI75G0950 Tripterygium wilfordii
TWI79G0577 Tripterygium wilfordii
unitig_8.g3988 Utricularia gibba
vmacro01423 Vaccinium macrocarpon
VMungo0720G1627 Vigna mungo
Zm00001eb009240 Zea mays
Zm00001eb399680 Zea mays

User provided reference genes

Program Settings