Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p52820 Brassica napus
A08p15060 Brassica napus
A09p16820 Brassica napus
Aa31LG2G9370 Aethionema arabicum
Aa31LG6G3620 Aethionema arabicum
Actinidia05593 Actinidia chinensis
Ah.09g235930 Amaranthus hybridus
Ah.14g089060 Amaranthus hybridus
AL2G15070 Arabidopsis lyrata
AL7G32380 Arabidopsis lyrata
Aqoxy1G02657 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1RAI3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NPL2R3 Arachis hypogaea
AT1G61255 Arabidopsis thaliana
AT4G21620 Arabidopsis thaliana
ATR0693G452 Amborella trichopoda
Atru.chr10.1978 Acer truncatum
BcaB03g11686 Brassica carinata
BcaB07g31269 Brassica carinata
BcaC01g00688 Brassica carinata
BcaC04g22318 Brassica carinata
BcaC06g30668 Brassica carinata
BcaNung00848 Brassica carinata
BcaNung00850 Brassica carinata
BolC3t20598H Brassica oleracea
BolC7t45626H Brassica oleracea
BolC9t54970H Brassica oleracea
BraA03t14358Z Brassica rapa
BraA08t33487Z Brassica rapa
BraA09t37319Z Brassica rapa
C03p83150 Brassica napus
C07p51260 Brassica napus
C09p20730 Brassica napus
CAN.G132.12 Capsicum annuum
CAN.G1705.1 Capsicum annuum
CANSAT56G3746 Cannabis sativa
CARHR051350 Cardamine hirsuta
CARHR051360 Cardamine hirsuta
CARHR228340 Cardamine hirsuta
Carub.0002s0390 Capsella rubella
Carub.0007s1976 Capsella rubella
Ca_00276_v3 Cicer arietinum L.
Cc02_g12670 Coffea canephora
CDE05G1692 Ceratophyllum demersum
CDE05G2245 Ceratophyllum demersum
CDE11G0417 Ceratophyllum demersum
Cfa000375 Carpinus fangiana
Ciclev10017067m.g Citrus clementina
CiPaw.09G160100 Carya illinoinensis
CiPaw.10G120700 Carya illinoinensis
ClCG01G022580 Citrullus lanatus
COL.COLO4_31550 Corchorus olitorius
Cpa.g.sc27.101 Carica papaya
CsaV3_6G049770 Cucumis sativus L.
DCAR_008063 Daucus carota
Dinv39793 Davidia involucrata
Dinv40512 Davidia involucrata
Duzib235G1303 Durio zibethinus
ECA236G3117 Erigeron canadensis
EL10Ac8g20634 Beta vulgaris
FAN11G1697 Fragaria x ananassa
FAN16G0443 Fragaria x ananassa
FAN21G2112 Fragaria x ananassa
FAN25G3432 Fragaria x ananassa
FvH4_3g04450 Fragaria vesca
Glyma.13G244800 Glycine max
Glyma.15G068900 Glycine max
Gohir.A05G163900 Gossypium hirsutum
Gohir.A06G123900 Gossypium hirsutum
Gohir.D05G166800 Gossypium hirsutum
Gohir.D06G128800 Gossypium hirsutum
Gorai.009G171900 Gossypium raimondii
Gorai.010G150300 Gossypium raimondii
GSVIVG01034659001 Vitis vinifera
HanXRQChr04g0125741 Helianthus annuus
Haze_06550 Corylus avellana
Hma1.2p1_0144F.1_g065030 Hydrangea macrophylla
Hma1.2p1_1363F.1_g278365 Hydrangea macrophylla
HPP92_018770 Vanilla planifolia
Lalb_Chr18g0059871 Lupinus albus
Lj1P1211T35 Lonicera japonica
Lj6g0023604 Lotus japonicus
Lsat_1_v5_gn_7_19840 Lactuca sativa
Manes.16G022700 Manihot esculenta
MBI02_g23716_MAGBIO Magnolia biondii
MBI02_g29949_MAGBIO Magnolia biondii
MD05G1323200 Malus domestica
MD10G1301000 Malus domestica
Medtr2g012520 Medicago truncatula
Medtr4g090520 Medicago truncatula
MELO3C007319.2 Cucumis melo
Migut.M01156 Erythranthe guttata
Nitab4.5_0003114g0080 Nicotiana tabacum
Nitab4.5_0003223g0020 Nicotiana tabacum
Nitab4.5_0006260g0010 Nicotiana tabacum
Nitab4.5_0006694g0040 Nicotiana tabacum
Nn025s41563 Nelumbo nucifera
Nn1g03946 Nelumbo nucifera
Nn1g06696 Nelumbo nucifera
Oeu005073.1 Olea europaea
Oeu026010.1 Olea europaea
Oeu026227.1 Olea europaea
Os03g0676300 Oryza sativa ssp. japonica
Os07g0123900 Oryza sativa ssp. japonica
Os12g0634700 Oryza sativa ssp. japonica
Peaxi162Scf00031g00071 Petunia axillaris
PGR042G0729 Punica granatum
PGSC0003DMG400010821 Solanum tuberosum
PGSC0003DMG400022371 Solanum tuberosum
Phvul.006G190300 Phaseolus vulgaris
Potri.004G036500 Populus trichocarpa
Potri.011G045000 Populus trichocarpa
Prupe.4G039400 Prunus persica
Psat1g207640 Pisum sativum
PSO541G1127 Papaver somniferum
PSO675G5172 Papaver somniferum
QL05p038407 Quercus lobata
RcHm_v2.0_Chr5g0006831 Rosa chinensis
Rhsim13G0175100 Rhododendron simsii
Sabra04G0022200 Salix brachista
Sabra11G0031300 Salix brachista
SalBow8G4104 Salvia bowleyana
Sc05g0007980 Simmondsia chinensis
Sed0018891 Sechium edule
Sed0027560 Sechium edule
SEGI_10462 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29666 Striga asiatica
Solyc02g078850.1 Solanum lycopersicum
Solyc10g009190.1 Solanum lycopersicum
Sopen02g023670 Solanum pennellii
Sopen10g004980 Solanum pennellii
Sp2g03210 Schrenkiella parvula
TAR624G0278 Trochodendron aralioides
TAR626G0583 Trochodendron aralioides
TAR627G0338 Trochodendron aralioides
THA.LOC104812802 Tarenaya hassleriana
THA.LOC104819068 Tarenaya hassleriana
Thecc.06G195800 Theobroma cacao
Thhalv10024143m.g Eutrema salsugineum
Thhalv10026556m.g Eutrema salsugineum
TPR.G32413 Trifolium pratense
TPR.G36753 Trifolium pratense
TWI38G1637 Tripterygium wilfordii
TWI38G1643 Tripterygium wilfordii
TWI63G0005 Tripterygium wilfordii
unitig_26.g9745 Utricularia gibba
unitig_26.g9746 Utricularia gibba
vmacro22273 Vaccinium macrocarpon
VMungo0540G0301 Vigna mungo
Zm00001eb032860 Zea mays
Zm00001eb090050 Zea mays
Zm00001eb092170 Zea mays
Zm00001eb217390 Zea mays
Zm00001eb299240 Zea mays

User provided reference genes

Program Settings