Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p21930 Brassica napus
A07p19340 Brassica napus
Aa31LG5G7350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_26.2 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_295.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_323.2 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.18 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.19 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2427 Anthoceros agrestis
Actinidia16628 Actinidia chinensis
Ah.12g052940 Amaranthus hybridus
AL4G23410 Arabidopsis lyrata
Aqoxy7G02809 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6SV6NI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CYD8BJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4RTFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3N3P9 Arachis hypogaea
AT2G28880 Arabidopsis thaliana
ATR0626G067 Amborella trichopoda
Atru.chr12.738 Acer truncatum
Atru.chr12.739 Acer truncatum
AUR62007018 Chenopodium quinoa
AUR62019882 Chenopodium quinoa
BcaB02g10208 Brassica carinata
BcaB06g28261 Brassica carinata
BcaC02g08128 Brassica carinata
BcaC02g11019 Brassica carinata
BcaC09g50322 Brassica carinata
BolC4t23734H Brassica oleracea
BolC4t27333H Brassica oleracea
BolC7t41359H Brassica oleracea
BolC8t47937H Brassica oleracea
BolC8t47938H Brassica oleracea
BolC9t58010H Brassica oleracea
BraA04t17760Z Brassica rapa
C01p26660 Brassica napus
C04p22120 Brassica napus
C04p58070 Brassica napus
C05p55670 Brassica napus
C07p09360 Brassica napus
C09p51520 Brassica napus
CAN.G4.2 Capsicum annuum
CANSAT25G2619 Cannabis sativa
CARHR122030 Cardamine hirsuta
Carub.0004s0987 Capsella rubella
Ca_10574_v3 Cicer arietinum L.
Ca_29597_v3 Cicer arietinum L.
CBR_g2786 Chara braunii
Cc09_g02020 Coffea canephora
CDE05G0793 Ceratophyllum demersum
CDE05G0857 Ceratophyllum demersum
Cfa023418 Carpinus fangiana
Ciclev10030655m.g Citrus clementina
CiPaw.02G174400 Carya illinoinensis
ClCG05G020950 Citrullus lanatus
COL.COLO4_23692 Corchorus olitorius
Cpa.g.sc53.70 Carica papaya
Cre03.g181400 Chlamydomonas reinhardtii
CsaV3_5G036360 Cucumis sativus L.
CSS0002233 Camellia sinensis var. sinensis
CSS0028648 Camellia sinensis var. sinensis
DCAR_015314 Daucus carota
Dinv11781 Davidia involucrata
Dinv11782 Davidia involucrata
Duzib128G1556 Durio zibethinus
ECA232G0614 Erigeron canadensis
EL10Ac5g11928 Beta vulgaris
EL10Ac5g12961 Beta vulgaris
Eucgr.G02823 Eucalyptus grandis
FAN01G2387 Fragaria x ananassa
FAN03G1313 Fragaria x ananassa
FAN06G3031 Fragaria x ananassa
FAN10G0780 Fragaria x ananassa
FAN10G0980 Fragaria x ananassa
FvH4_7g19560 Fragaria vesca
FvH4_7g19690 Fragaria vesca
Glyma.10G211600 Glycine max
Glyma.20G179400 Glycine max
Gohir.A10G206600 Gossypium hirsutum
Gohir.D10G214700 Gossypium hirsutum
Gorai.011G240300 Gossypium raimondii
GSVIVG01016290001 Vitis vinifera
GSVIVG01016291001 Vitis vinifera
HanXRQChr08g0208591 Helianthus annuus
Haze_05226 Corylus avellana
Haze_16900 Corylus avellana
Hma1.2p1_0030F.1_g018320 Hydrangea macrophylla
Hma1.2p1_0030F.1_g018330 Hydrangea macrophylla
HPP92_010286 Vanilla planifolia
HPP92_010397 Vanilla planifolia
HPP92_010398 Vanilla planifolia
Hund11372 Selenicereus undatus
Lalb_Chr02g0142131 Lupinus albus
Lj1C915G0 Lonicera japonica
Lj5g0009066 Lotus japonicus
Lsat_1_v5_gn_4_181581 Lactuca sativa
Manes.07G101300 Manihot esculenta
Mapoly0009s0140 Marchantia polymorpha
MBI13_g34045_MAGBIO Magnolia biondii
MCO09G690 Micromonas commoda
MD01G1109300 Malus domestica
MD07G1175300 Malus domestica
Medtr0735s0010 Medicago truncatula
Medtr1g095360 Medicago truncatula
MELO3C012434.2 Cucumis melo
MELO3C030758.2 Cucumis melo
MELO3C030809.2 Cucumis melo
MELO3C033500.2 Cucumis melo
Migut.F01772 Erythranthe guttata
Nitab4.5_0004657g0010 Nicotiana tabacum
Nitab4.5_0013243g0010 Nicotiana tabacum
Nn8g40780 Nelumbo nucifera
Oeu043946.1 Olea europaea
Oeu043947.4 Olea europaea
Os06g0699700 Oryza sativa ssp. japonica
Peaxi162Scf00747g00211 Petunia axillaris
PGR142G2437 Punica granatum
PGSC0003DMG400009777 Solanum tuberosum
Phvul.007G094100 Phaseolus vulgaris
Potri.010G221500 Populus trichocarpa
Pp3c26_2070 Physcomitrium patens
PRCOL_00000505 Prasinoderma coloniale
Prupe.2G214500 Prunus persica
Psat6g184480 Pisum sativum
PSO063G3786 Papaver somniferum
PSO170G4427 Papaver somniferum
QL08p056120 Quercus lobata
RcHm_v2.0_Chr1g0363521 Rosa chinensis
Rhsim09G0110900 Rhododendron simsii
Sabra10G0171400 Salix brachista
SalBow5G2521 Salvia bowleyana
Sc20g0001900 Simmondsia chinensis
Sc20g0001910 Simmondsia chinensis
Sed0008505 Sechium edule
SEGI_34163 Sequoiadendron giganteum
SGA_v2.0_scaffold341G49365 Striga asiatica
SHI08829 Sapria himalayana
SHI08834 Sapria himalayana
SHI08835 Sapria himalayana
SHI08836 Sapria himalayana
SMO356G0457 Selaginella moellendorffii
Solyc04g049360.3 Solanum lycopersicum
Sopen04g019320 Solanum pennellii
Sp4g11690 Schrenkiella parvula
TAR383G0975 Trochodendron aralioides
TAR626G1809 Trochodendron aralioides
Thecc.10G072500 Theobroma cacao
Thhalv10016200m.g Eutrema salsugineum
TPR.G1941 Trifolium pratense
TWI15G0420 Tripterygium wilfordii
TWI38G1549 Tripterygium wilfordii
unitig_60.g25702 Utricularia gibba
VMungo0720G1279 Vigna mungo
Zm00001eb272970 Zea mays

User provided reference genes

Program Settings