Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p37560 Brassica napus
Aa31LG4G9300 Aethionema arabicum
Actinidia24491 Actinidia chinensis
Ah.05g173850 Amaranthus hybridus
Ah.08g220640 Amaranthus hybridus
Ah.16g100720 Amaranthus hybridus
AL2G30824 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.6847YK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6TK8TS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7R7ZTH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EB1NGP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I0AKGU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IFYB19 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U93Q4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z9P42K Arachis hypogaea
AT1G71210 Arabidopsis thaliana
ATR0605G071 Amborella trichopoda
ATR0697G207 Amborella trichopoda
Atru.BG.182.p Acer truncatum
Atru.chr9.109 Acer truncatum
AUR62009429 Chenopodium quinoa
AUR62023108 Chenopodium quinoa
BcaB03g14878 Brassica carinata
BcaB05g24655 Brassica carinata
BolC6t39583H Brassica oleracea
BolC6t39586H Brassica oleracea
BraA07t31317Z Brassica rapa
C06p45300 Brassica napus
CAN.G147.12 Capsicum annuum
CAN.G986.33 Capsicum annuum
CAN.G986.34 Capsicum annuum
CANSAT56G4335 Cannabis sativa
CARHR064510 Cardamine hirsuta
Carub.0002s1809 Capsella rubella
Ca_06171_v3 Cicer arietinum L.
Cc06_g12410 Coffea canephora
CDE01G0049 Ceratophyllum demersum
CDE02G3572 Ceratophyllum demersum
CDE09G0275 Ceratophyllum demersum
CDE12G0310 Ceratophyllum demersum
Cfa010144 Carpinus fangiana
Ciclev10024609m.g Citrus clementina
CiPaw.13G145000 Carya illinoinensis
COL.COLO4_04586 Corchorus olitorius
COL.COLO4_29903 Corchorus olitorius
Cpa.g.c26548.5 Carica papaya
CsaV3_2G007350 Cucumis sativus L.
CSS0029611 Camellia sinensis var. sinensis
CSS0039136 Camellia sinensis var. sinensis
CSS0049259 Camellia sinensis var. sinensis
DCAR_003089 Daucus carota
DCAR_019962 Daucus carota
Dinv06816 Davidia involucrata
ECA232G0714 Erigeron canadensis
ECA234G4279 Erigeron canadensis
EL10Ac2g04386 Beta vulgaris
Eucgr.J00651 Eucalyptus grandis
FAN05G2593 Fragaria x ananassa
FAN05G3696 Fragaria x ananassa
FAN07G0420 Fragaria x ananassa
FAN09G0480 Fragaria x ananassa
FAN09G4036 Fragaria x ananassa
FAN10G2924 Fragaria x ananassa
FAN11G1373 Fragaria x ananassa
FAN11G3663 Fragaria x ananassa
FAN15G2228 Fragaria x ananassa
FAN16G1650 Fragaria x ananassa
FAN16G2696 Fragaria x ananassa
FAN18G1946 Fragaria x ananassa
FAN25G1477 Fragaria x ananassa
FAN26G1702 Fragaria x ananassa
FAN26G3132 Fragaria x ananassa
FAN27G1421 Fragaria x ananassa
FvH4_3g29690 Fragaria vesca
Glyma.02G276200 Glycine max
Glyma.14G039600 Glycine max
Gohir.A02G106600 Gossypium hirsutum
Gohir.A05G337100 Gossypium hirsutum
Gohir.D03G072203 Gossypium hirsutum
Gohir.D04G075700 Gossypium hirsutum
Gorai.003G087500 Gossypium raimondii
Gorai.012G085500 Gossypium raimondii
HanXRQChr15g0495131 Helianthus annuus
Haze_23534 Corylus avellana
Hma1.2p1_0057F.1_g032040 Hydrangea macrophylla
HPP92_028041 Vanilla planifolia
HPP92_028303 Vanilla planifolia
HPP92_028304 Vanilla planifolia
HPP92_028305 Vanilla planifolia
Lalb_Chr04g0249471 Lupinus albus
Lj1P662T20 Lonicera japonica
Lj4g0006774 Lotus japonicus
LjContig00564g0007311 Lotus japonicus
Lsat_1_v5_gn_4_139140 Lactuca sativa
Lsat_1_v5_gn_4_139241 Lactuca sativa
Manes.01G175200 Manihot esculenta
Manes.02G133800 Manihot esculenta
MBI04_g31965_MAGBIO Magnolia biondii
MBI04_g31976_MAGBIO Magnolia biondii
MBI04_g31977_MAGBIO Magnolia biondii
MBI18_g03650_MAGBIO Magnolia biondii
MD05G1041400 Malus domestica
MD10G1047800 Malus domestica
Medtr5g088490 Medicago truncatula
Medtr5g088510 Medicago truncatula
Migut.J00915 Erythranthe guttata
Migut.L01576 Erythranthe guttata
MSTRG.26477 Avicennia marina
Nitab4.5_0003308g0060 Nicotiana tabacum
Nn2g14491 Nelumbo nucifera
Oeu062248.1 Olea europaea
Os02g0127600 Oryza sativa ssp. japonica
Peaxi162Scf00315g00041 Petunia axillaris
PGR119G2361 Punica granatum
PGSC0003DMG400027882 Solanum tuberosum
Phvul.008G205300 Phaseolus vulgaris
Potri.003G000601 Populus trichocarpa
Potri.003G000701 Populus trichocarpa
Potri.004G229100 Populus trichocarpa
Prupe.8G057300 Prunus persica
Psat0ss7919g0040 Pisum sativum
Psat2g021520 Pisum sativum
PSO063G6404 Papaver somniferum
PSO198G0081 Papaver somniferum
QL02p039304 Quercus lobata
QL03p008874 Quercus lobata
RcHm_v2.0_Chr5g0055041 Rosa chinensis
Rhsim01G0260800 Rhododendron simsii
Sabra01G0174200 Salix brachista
SalBow6G2874 Salvia bowleyana
Sc10g0000400 Simmondsia chinensis
Sed0014805 Sechium edule
SEGI_02727 Sequoiadendron giganteum
SEGI_13595 Sequoiadendron giganteum
SEGI_26474 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30882 Striga asiatica
SGA_v2.0_scaffold21G09513 Striga asiatica
SGA_v2.0_scaffold296G47545 Striga asiatica
SGA_v2.0_scaffold9G04849 Striga asiatica
SHI25070 Sapria himalayana
Solyc07g042030.2 Solanum lycopersicum
Sopen07g021630 Solanum pennellii
Sp5g26370 Schrenkiella parvula
TAR622G0302 Trochodendron aralioides
TAR622G0815 Trochodendron aralioides
THA.LOC104800219 Tarenaya hassleriana
Thecc.04G015500 Theobroma cacao
Thhalv10018115m.g Eutrema salsugineum
TPR.G11801 Trifolium pratense
TPR.G14625 Trifolium pratense
TWI75G1155 Tripterygium wilfordii
TWI79G0945 Tripterygium wilfordii
VMungo0647G1136 Vigna mungo
Zm00001eb231010 Zea mays

User provided reference genes

Program Settings