Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02500 Brassica napus
A03p06620 Brassica napus
Aa31LG11G15220 Aethionema arabicum
Aa31LG9G1060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1010 Anthoceros agrestis
Actinidia18440 Actinidia chinensis
Actinidia33328 Actinidia chinensis
Actinidia35780 Actinidia chinensis
Ah.02g128240 Amaranthus hybridus
AL6G25170 Arabidopsis lyrata
AL7G49230 Arabidopsis lyrata
Aqoxy3G01250 Aquilegia oxysepala
Aqoxy3G01251 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65GF4N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea
AT5G14440 Arabidopsis thaliana
AT5G40570 Arabidopsis thaliana
ATR0122G021 Amborella trichopoda
Atru.chr6.2436 Acer truncatum
AUR62028428 Chenopodium quinoa
BcaB01g06372 Brassica carinata
BcaB02g07942 Brassica carinata
BcaB03g16876 Brassica carinata
BcaC01g01740 Brassica carinata
BcaC01g01812 Brassica carinata
BcaC03g13488 Brassica carinata
BcaC03g13490 Brassica carinata
BcaC04g20684 Brassica carinata
BcaC05g29299 Brassica carinata
BcaC07g37075 Brassica carinata
BcaC08g44464 Brassica carinata
BcaNung03155 Brassica carinata
BcaNung03158 Brassica carinata
BolC2t06621H Brassica oleracea
BolC3t13265H Brassica oleracea
BolC3t19536H Brassica oleracea
BolC5t34251H Brassica oleracea
BolC5t34252H Brassica oleracea
BolC7t41458H Brassica oleracea
BolC8t47241H Brassica oleracea
BolC9t56944H Brassica oleracea
BraA02t05220Z Brassica rapa
BraA03t09994Z Brassica rapa
BraA05t22528Z Brassica rapa
C02p06750 Brassica napus
C03p07650 Brassica napus
C05p55830 Brassica napus
C08p04380 Brassica napus
C09p40620 Brassica napus
CAN.G473.32 Capsicum annuum
CANSAT01G0425 Cannabis sativa
CARHR198870 Cardamine hirsuta
CARHR261410 Cardamine hirsuta
Carub.0006s1262 Capsella rubella
Carub.0007s3495 Capsella rubella
Ca_07059_v3 Cicer arietinum L.
Cc07_g00060 Coffea canephora
CDE02G1226 Ceratophyllum demersum
CDE06G1742 Ceratophyllum demersum
CDE09G1218 Ceratophyllum demersum
Cfa007334 Carpinus fangiana
Ciclev10018402m.g Citrus clementina
CiPaw.03G046200 Carya illinoinensis
CiPaw.04G029900 Carya illinoinensis
ClCG10G013750 Citrullus lanatus
COL.COLO4_29185 Corchorus olitorius
Cpa.g.sc130.76 Carica papaya
CsaV3_3G042920 Cucumis sativus L.
CSS0038869 Camellia sinensis var. sinensis
DCAR_011265 Daucus carota
DCAR_021737 Daucus carota
Dinv25722 Davidia involucrata
Dinv33420 Davidia involucrata
Duzib147G0999 Durio zibethinus
ECA238G0280 Erigeron canadensis
EL10Ac6g14096 Beta vulgaris
Eucgr.I01726 Eucalyptus grandis
FAN02G4014 Fragaria x ananassa
FAN05G5758 Fragaria x ananassa
FAN09G1186 Fragaria x ananassa
FAN14G2962 Fragaria x ananassa
FvH4_6g51920 Fragaria vesca
Glyma.16G018100 Glycine max
Glyma.16G068500 Glycine max
Gohir.A04G046350 Gossypium hirsutum
Gohir.A10G101700 Gossypium hirsutum
Gohir.D10G085900 Gossypium hirsutum
Gorai.011G094100 Gossypium raimondii
GSVIVG01032375001 Vitis vinifera
HanXRQChr14g0451131 Helianthus annuus
Haze_14764 Corylus avellana
Hma1.2p1_0818F.1_g223300 Hydrangea macrophylla
Hma1.2p1_1563F.1_g290780 Hydrangea macrophylla
Hma1.2p1_1747F.1_g300620 Hydrangea macrophylla
HPP92_008082 Vanilla planifolia
Hund13000 Selenicereus undatus
Lalb_Chr14g0362901 Lupinus albus
Lj1g0001798 Lotus japonicus
Lj7A601G104 Lonicera japonica
Lju41A44T82 Lonicera japonica
Lsat_1_v5_gn_2_91141 Lactuca sativa
Manes.15G152300 Manihot esculenta
Mapoly0013s0192 Marchantia polymorpha
MBI06_g10164_MAGBIO Magnolia biondii
MD09G1021700 Malus domestica
MD10G1172000 Malus domestica
MD17G1021600 Malus domestica
Medtr7g033120 Medicago truncatula
MELO3C026593.2 Cucumis melo
Migut.H00022 Erythranthe guttata
MSTRG.3133 Avicennia marina
Nitab4.5_0001562g0090 Nicotiana tabacum
Nitab4.5_0006683g0090 Nicotiana tabacum
Nn3g16678 Nelumbo nucifera
Os04g0480400 Oryza sativa ssp. japonica
Peaxi162Scf00420g00132 Petunia axillaris
PGR083G1527 Punica granatum
PGR142G1749 Punica granatum
PGSC0003DMG400012612 Solanum tuberosum
Phvul.008G228200 Phaseolus vulgaris
Potri.001G342400 Populus trichocarpa
Prupe.3G294600 Prunus persica
Psat5g038480 Pisum sativum
PSO017G6962 Papaver somniferum
PSO339G5508 Papaver somniferum
PSO478G2740 Papaver somniferum
QL02p073881 Quercus lobata
RcHm_v2.0_Chr2g0173401 Rosa chinensis
Rhsim08G0048200 Rhododendron simsii
Sabra15G0083700 Salix brachista
Sabra16G0222000 Salix brachista
SalBow1G0524 Salvia bowleyana
Sc03g0007250 Simmondsia chinensis
Sed0010446 Sechium edule
SEGI_27694 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34920 Striga asiatica
SMO119G0179 Selaginella moellendorffii
Solyc02g093510.3 Solanum lycopersicum
Sopen02g038150 Solanum pennellii
Sp6g29580 Schrenkiella parvula
Sp7g01290 Schrenkiella parvula
TAR374G0154 Trochodendron aralioides
THA.LOC104802393 Tarenaya hassleriana
THA.LOC104805360 Tarenaya hassleriana
Thecc.04G020400 Theobroma cacao
Thhalv10014310m.g Eutrema salsugineum
Thhalv10027935m.g Eutrema salsugineum
TPR.G1089 Trifolium pratense
TWI36G0764 Tripterygium wilfordii
unitig_62.g23373 Utricularia gibba
vmacro18299 Vaccinium macrocarpon
VMungo0647G2046 Vigna mungo
Zm00001eb079500 Zea mays
Zm00001eb424970 Zea mays

User provided reference genes

Program Settings