Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16880 Brassica napus
A09p09540 Brassica napus
A09p44560 Brassica napus
Aa31LG1G15590 Aethionema arabicum
Actinidia22642 Actinidia chinensis
Actinidia23291 Actinidia chinensis
Ah.03g145230 Amaranthus hybridus
AL8G44300 Arabidopsis lyrata
Aqoxy5G01213 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HINR4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7PSM7 Arachis hypogaea
AT5G67070 Arabidopsis thaliana
ATR0022G036 Amborella trichopoda
ATR0584G062 Amborella trichopoda
Atru.chr13.715 Acer truncatum
Atru.chr3.312 Acer truncatum
AUR62001922 Chenopodium quinoa
BcaB02g09961 Brassica carinata
BcaB04g20074 Brassica carinata
BcaC03g18389 Brassica carinata
BcaC04g23192 Brassica carinata
BcaC06g34786 Brassica carinata
BolC2t12525H Brassica oleracea
BolC7t42989H Brassica oleracea
BolC9t54016H Brassica oleracea
BraA07t29414Z Brassica rapa
BraA09t36602Z Brassica rapa
BraA09t39916Z Brassica rapa
C02p64650 Brassica napus
C07p24690 Brassica napus
C09p11270 Brassica napus
CAN.G370.56 Capsicum annuum
CANSAT01G1455 Cannabis sativa
CARHR280580 Cardamine hirsuta
Carub.0008s2744 Capsella rubella
Ca_24764_v3 Cicer arietinum L.
Cc07_g06070 Coffea canephora
Cc10_g04550 Coffea canephora
Cfa004029 Carpinus fangiana
Ciclev10003632m.g Citrus clementina
Ciclev10026759m.g Citrus clementina
CiPaw.01G017400 Carya illinoinensis
CiPaw.02G007900 Carya illinoinensis
COL.COLO4_11434 Corchorus olitorius
COL.COLO4_26533 Corchorus olitorius
Cpa.g.sc55.141 Carica papaya
CsaV3_2G017290 Cucumis sativus L.
CSS0043615 Camellia sinensis var. sinensis
DCAR_010886 Daucus carota
DCAR_012782 Daucus carota
Dinv29994 Davidia involucrata
Dinv39838 Davidia involucrata
Duzib116G0051 Durio zibethinus
Duzib147G1343 Durio zibethinus
Duzib187G0281 Durio zibethinus
ECA232G3279 Erigeron canadensis
EL10Ac6g15736 Beta vulgaris
FAN19G0458 Fragaria x ananassa
FAN23G0585 Fragaria x ananassa
FAN26G1593 Fragaria x ananassa
FAN28G0806 Fragaria x ananassa
FvH4_1g16140 Fragaria vesca
Glyma.01G186800 Glycine max
Glyma.11G055200 Glycine max
Gohir.A06G019500 Gossypium hirsutum
Gohir.A10G091700 Gossypium hirsutum
Gohir.A11G192920 Gossypium hirsutum
Gohir.A12G071800 Gossypium hirsutum
Gohir.D06G017900 Gossypium hirsutum
Gohir.D10G096600 Gossypium hirsutum
Gohir.D11G199700 Gossypium hirsutum
Gohir.D12G069800 Gossypium hirsutum
Gorai.007G213800 Gossypium raimondii
Gorai.008G076900 Gossypium raimondii
Gorai.010G020800 Gossypium raimondii
Gorai.011G105900 Gossypium raimondii
GSVIVG01022118001 Vitis vinifera
HanXRQChr12g0381281 Helianthus annuus
HanXRQChr15g0490381 Helianthus annuus
Haze_15389 Corylus avellana
Haze_15390 Corylus avellana
Hma1.2p1_0017F.1_g011460 Hydrangea macrophylla
Hma1.2p1_0360F.1_g135640 Hydrangea macrophylla
HPP92_016141 Vanilla planifolia
Lalb_Chr09g0323221 Lupinus albus
Lj2g0001321 Lotus japonicus
Lsat_1_v5_gn_3_89200 Lactuca sativa
Lsat_1_v5_gn_4_165900 Lactuca sativa
Manes.12G103411 Manihot esculenta
Manes.13G123500 Manihot esculenta
Manes.18G038800 Manihot esculenta
Mapoly0002s0166 Marchantia polymorpha
Mapoly0040s0047 Marchantia polymorpha
Mapoly0076s0067 Marchantia polymorpha
MBI16_g18335_MAGBIO Magnolia biondii
MD02G1173500 Malus domestica
MD15G1285000 Malus domestica
Medtr5g017160 Medicago truncatula
MELO3C020932.2 Cucumis melo
Migut.H00425 Erythranthe guttata
Migut.N02720 Erythranthe guttata
MSTRG.24340 Avicennia marina
MSTRG.2874 Avicennia marina
Nitab4.5_0003298g0030 Nicotiana tabacum
Nitab4.5_0005144g0020 Nicotiana tabacum
Nn1g03799 Nelumbo nucifera
Nn1g04822 Nelumbo nucifera
Nn5g30267 Nelumbo nucifera
Oeu023858.1 Olea europaea
Oeu047214.1 Olea europaea
Oeu062445.1 Olea europaea
Peaxi162Scf00450g00215 Petunia axillaris
Peaxi162Scf01113g00005 Petunia axillaris
PGR102G2467 Punica granatum
PGSC0003DMG400004038 Solanum tuberosum
Phvul.002G018200 Phaseolus vulgaris
Potri.005G139100 Populus trichocarpa
Potri.007G044700 Populus trichocarpa
Potri.014G026900 Populus trichocarpa
Pp3c25_4180 Physcomitrium patens
Pp3c3_15280 Physcomitrium patens
Pp3c6_7200 Physcomitrium patens
Prupe.7G132200 Prunus persica
Psat2g166520 Pisum sativum
PSO210G3073 Papaver somniferum
PSO541G4783 Papaver somniferum
PSO675G8229 Papaver somniferum
QL06p041210 Quercus lobata
RcHm_v2.0_Chr2g0105821 Rosa chinensis
Rhsim06G0051700 Rhododendron simsii
Rhsim08G0100100 Rhododendron simsii
Sabra05G0111700 Salix brachista
Sabra07G0039600 Salix brachista
Sabra14G0018400 Salix brachista
SalBow6G6817 Salvia bowleyana
Sc16g0004670 Simmondsia chinensis
Sed0013836 Sechium edule
SGA_v2.0_scaffold14G06992 Striga asiatica
SMO013G0022 Selaginella moellendorffii
SMO143G0215 Selaginella moellendorffii
Solyc02g090960.1 Solanum lycopersicum
Sopen02g035610 Solanum pennellii
Sp2g29610 Schrenkiella parvula
TAR376G0922 Trochodendron aralioides
TAR628G0259 Trochodendron aralioides
THA.LOC104819237 Tarenaya hassleriana
THA.LOC104827176 Tarenaya hassleriana
Thecc.01G057500 Theobroma cacao
Thecc.08G004700 Theobroma cacao
Thhalv10005130m.g Eutrema salsugineum
TPR.G30700 Trifolium pratense
TWI09G1123 Tripterygium wilfordii
TWI73G0829 Tripterygium wilfordii
unitig_899.g14944 Utricularia gibba

User provided reference genes

Program Settings