Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p06630 Brassica napus
A08p34290 Brassica napus
Actinidia10268 Actinidia chinensis
Actinidia19256 Actinidia chinensis
AL1G20520 Arabidopsis lyrata
Aqoxy6G00652 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ZY5S91 Arachis hypogaea
AT1G09920 Arabidopsis thaliana
ATR0800G163 Amborella trichopoda
Atru.chr13.955 Acer truncatum
AUR62014379 Chenopodium quinoa
AUR62019121 Chenopodium quinoa
BcaB03g13545 Brassica carinata
BcaC05g24832 Brassica carinata
BcaC07g38533 Brassica carinata
BcaC07g41856 Brassica carinata
BolC5t29556H Brassica oleracea
BolC8t48959H Brassica oleracea
BraA06t23877Z Brassica rapa
BraA08t35340Z Brassica rapa
C05p08040 Brassica napus
C08p13270 Brassica napus
CAN.G1104.12 Capsicum annuum
CAN.G1104.13 Capsicum annuum
CAN.G723.7 Capsicum annuum
CANSAT25G1480 Cannabis sativa
CARHR009970 Cardamine hirsuta
Carub.0001s0930 Capsella rubella
Ca_05476_v3 Cicer arietinum L.
Ca_30556_v3 Cicer arietinum L.
Cc10_g08310 Coffea canephora
CDE01G0193 Ceratophyllum demersum
CDE02G4408 Ceratophyllum demersum
CDE07G0871 Ceratophyllum demersum
Ciclev10002525m.g Citrus clementina
CiPaw.07G162400 Carya illinoinensis
ClCG11G014720 Citrullus lanatus
COL.COLO4_35296 Corchorus olitorius
Cpa.g.sc177.17 Carica papaya
CsaV3_3G048130 Cucumis sativus L.
CSS0014871 Camellia sinensis var. sinensis
DCAR_020031 Daucus carota
Dinv36973 Davidia involucrata
Dinv42587 Davidia involucrata
Duzib041G0637 Durio zibethinus
Duzib093G0042 Durio zibethinus
Duzib116G0735 Durio zibethinus
ECA246G4228 Erigeron canadensis
ECA247G3351 Erigeron canadensis
EL10Ac1g00475 Beta vulgaris
Eucgr.F00443 Eucalyptus grandis
FAN04G2969 Fragaria x ananassa
FAN08G1925 Fragaria x ananassa
FAN18G1173 Fragaria x ananassa
FvH4_5g34100 Fragaria vesca
Glyma.02G216500 Glycine max
Glyma.04G091000 Glycine max
Glyma.06G092700 Glycine max
Glyma.14G183500 Glycine max
Gohir.A01G125800 Gossypium hirsutum
Gohir.A05G216900 Gossypium hirsutum
Gohir.A06G030500 Gossypium hirsutum
Gohir.D01G113700 Gossypium hirsutum
Gohir.D05G220600 Gossypium hirsutum
Gohir.D06G029800 Gossypium hirsutum
Gorai.002G138100 Gossypium raimondii
Gorai.009G227600 Gossypium raimondii
Gorai.010G032800 Gossypium raimondii
GSVIVG01009216001 Vitis vinifera
GSVIVG01009218001 Vitis vinifera
HanXRQChr02g0046001 Helianthus annuus
HanXRQChr05g0163501 Helianthus annuus
HanXRQChr10g0277731 Helianthus annuus
Haze_22493 Corylus avellana
Hma1.2p1_0010F.1_g006440 Hydrangea macrophylla
Hma1.2p1_0125F.1_g058660 Hydrangea macrophylla
Hund17253 Selenicereus undatus
Lalb_Chr11g0064841 Lupinus albus
Lalb_Chr17g0344651 Lupinus albus
LjContig00408g0019215 Lotus japonicus
Lsat_1_v5_gn_1_840 Lactuca sativa
Lsat_1_v5_gn_6_107340 Lactuca sativa
Manes.12G122400 Manihot esculenta
Manes.18G057500 Manihot esculenta
Mapoly0004s0283 Marchantia polymorpha
MBI05_g43456_MAGBIO Magnolia biondii
MBI10_g33157_MAGBIO Magnolia biondii
MBI10_g33158_MAGBIO Magnolia biondii
MBI16_g12296_MAGBIO Magnolia biondii
MD08G1206200 Malus domestica
MD15G1389500 Malus domestica
Medtr3g099560 Medicago truncatula
Medtr3g111440 Medicago truncatula
Medtr5g066840 Medicago truncatula
MELO3C003503.2 Cucumis melo
Migut.C00072 Erythranthe guttata
MSTRG.24993 Avicennia marina
MSTRG.932 Avicennia marina
Nitab4.5_0000354g0090 Nicotiana tabacum
Nitab4.5_0000885g0090 Nicotiana tabacum
Nitab4.5_0003184g0020 Nicotiana tabacum
Nitab4.5_0018050g0020 Nicotiana tabacum
Nn1g05655 Nelumbo nucifera
Nn5g29801 Nelumbo nucifera
Oeu038164.1 Olea europaea
Os03g0356652 Oryza sativa ssp. japonica
Os07g0657500 Oryza sativa ssp. japonica
Peaxi162Scf00962g00039 Petunia axillaris
PGR042G0432 Punica granatum
PGSC0003DMG402002053 Solanum tuberosum
Phvul.008G183600 Phaseolus vulgaris
Phvul.009G145000 Phaseolus vulgaris
Potri.002G109800 Populus trichocarpa
Prupe.1G538600 Prunus persica
Psat0s3268g0200 Pisum sativum
Psat2g064440 Pisum sativum
PSO532G0015 Papaver somniferum
PSO541G4289 Papaver somniferum
PSO541G5225 Papaver somniferum
QL12p039787 Quercus lobata
RcHm_v2.0_Chr7g0233601 Rosa chinensis
Sabra02G0086400 Salix brachista
Sc26g0003070 Simmondsia chinensis
Sed0023619 Sechium edule
Sed0025083 Sechium edule
SEGI_14572 Sequoiadendron giganteum
SGA_v2.0_scaffold74G24544 Striga asiatica
Solyc04g076670.3 Solanum lycopersicum
Solyc12g088060.2 Solanum lycopersicum
Solyc12g088070.2 Solanum lycopersicum
Sopen04g030390 Solanum pennellii
Sopen12g030090 Solanum pennellii
Sp1g08560 Schrenkiella parvula
TAR381G0646 Trochodendron aralioides
TAR625G1011 Trochodendron aralioides
THA.LOC104816787 Tarenaya hassleriana
THA.LOC104823690 Tarenaya hassleriana
Thecc.08G074700 Theobroma cacao
Thhalv10008829m.g Eutrema salsugineum
TPR.G12363 Trifolium pratense
TPR.G27047 Trifolium pratense
TWI12G1154 Tripterygium wilfordii
TWI36G1537 Tripterygium wilfordii
TWI56G0975 Tripterygium wilfordii
unitig_578.g16108 Utricularia gibba
unitig_8.g4905 Utricularia gibba
vmacro21362 Vaccinium macrocarpon
vmacro22764 Vaccinium macrocarpon
VMungo0647G0779 Vigna mungo
VMungo1309G0719 Vigna mungo
Zm00001eb017320 Zea mays
Zm00001eb110680 Zea mays
Zm00001eb329620 Zea mays
Zm00001eb394470 Zea mays

User provided reference genes

Program Settings