Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p36610 Brassica napus
Aa31LG10G17080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2288 Anthoceros agrestis
Actinidia00788 Actinidia chinensis
Actinidia09114 Actinidia chinensis
Actinidia21133 Actinidia chinensis
Actinidia21134 Actinidia chinensis
Actinidia24914 Actinidia chinensis
AL2G11930 Arabidopsis lyrata
AL2G11990 Arabidopsis lyrata
Aqoxy2G03435 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RIN6C8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S84LE1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9SXTW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YE39MU Arachis hypogaea
AT1G08120 Arabidopsis thaliana
AT5G26110 Arabidopsis thaliana
ATR0665G226 Amborella trichopoda
Atru.chr5.1488 Acer truncatum
AUR62012543 Chenopodium quinoa
AUR62032312 Chenopodium quinoa
BcaC03g17841 Brassica carinata
BcaNung02803 Brassica carinata
BcaNung03978 Brassica carinata
BolC7t44719H Brassica oleracea
BraA06t26586Z Brassica rapa
C07p41870 Brassica napus
CAN.G1549.14 Capsicum annuum
CAN.G1549.26 Capsicum annuum
CANSAT80G2828 Cannabis sativa
CARHR187390 Cardamine hirsuta
Carub.0005s0602 Capsella rubella
Carub.0006s2388 Capsella rubella
Ca_15021_v3 Cicer arietinum L.
CBR_g40454 Chara braunii
Cc01_g06090 Coffea canephora
CDE04G0604 Ceratophyllum demersum
Cfa006174 Carpinus fangiana
Ciclev10022091m.g Citrus clementina
CiPaw.07G089000 Carya illinoinensis
ClCG03G016560 Citrullus lanatus
Cpa.g.sc41.63 Carica papaya
Cre06.g306800 Chlamydomonas reinhardtii
CsaV3_1G039420 Cucumis sativus L.
CSS0005681 Camellia sinensis var. sinensis
CSS0010466 Camellia sinensis var. sinensis
CSS0032403 Camellia sinensis var. sinensis
DCAR_002713 Daucus carota
DCAR_012498 Daucus carota
Dinv34783 Davidia involucrata
Duzib138G1187 Durio zibethinus
ECA248G2232 Erigeron canadensis
EL10Ac5g10525 Beta vulgaris
Eucgr.G02085 Eucalyptus grandis
FAN20G2343 Fragaria x ananassa
FAN27G1754 Fragaria x ananassa
FvH4_2g23150 Fragaria vesca
Glyma.02G191000 Glycine max
Glyma.17G044400 Glycine max
Glyma.18G056100 Glycine max
Gohir.A12G003600 Gossypium hirsutum
Gohir.D12G003300 Gossypium hirsutum
Gorai.008G003100 Gossypium raimondii
GSVIVG01001190001 Vitis vinifera
GSVIVG01017585001 Vitis vinifera
GSVIVG01020385001 Vitis vinifera
HanXRQChr08g0213371 Helianthus annuus
Haze_04673 Corylus avellana
Hma1.2p1_2357F.1_g320590 Hydrangea macrophylla
HPP92_017651 Vanilla planifolia
Hund02843 Selenicereus undatus
Lalb_Chr18g0051481 Lupinus albus
Lj1A49T61 Lonicera japonica
Lj2g0018175 Lotus japonicus
Lj3A581T22 Lonicera japonica
Lj3g0010058 Lotus japonicus
Lj6g0011383 Lotus japonicus
Lsat_1_v5_gn_3_83521 Lactuca sativa
Lsat_1_v5_gn_5_186200 Lactuca sativa
Manes.01G205200 Manihot esculenta
Manes.05G078700 Manihot esculenta
Mapoly0133s0052 Marchantia polymorpha
MBI02_g08255_MAGBIO Magnolia biondii
MBI15_g39353_MAGBIO Magnolia biondii
MCO10G359 Micromonas commoda
MD11G1280900 Malus domestica
Medtr3g465790 Medicago truncatula
MELO3C015367.2 Cucumis melo
Migut.D00330 Erythranthe guttata
Migut.N02033 Erythranthe guttata
Nitab4.5_0000208g0100 Nicotiana tabacum
Nitab4.5_0000759g0280 Nicotiana tabacum
Nitab4.5_0004355g0020 Nicotiana tabacum
Nitab4.5_0006132g0020 Nicotiana tabacum
Nn1g02388 Nelumbo nucifera
Nn6g34126 Nelumbo nucifera
Oeu025750.1 Olea europaea
Peaxi162Scf00783g00122 Petunia axillaris
PGR031G3940 Punica granatum
PGSC0003DMG400017838 Solanum tuberosum
PGSC0003DMG400020135 Solanum tuberosum
Phvul.006G075100 Phaseolus vulgaris
Phvul.007G249400 Phaseolus vulgaris
Potri.002G049900 Populus trichocarpa
Potri.005G212800 Populus trichocarpa
Pp3c15_20330 Physcomitrium patens
Prupe.8G236800 Prunus persica
Psat2g184920 Pisum sativum
Psat6g025640 Pisum sativum
PSO170G2661 Papaver somniferum
PSO210G1988 Papaver somniferum
PSO832G1010 Papaver somniferum
QL01p010878 Quercus lobata
QL01p011010 Quercus lobata
QL12p020786 Quercus lobata
RcHm_v2.0_Chr3g0476231 Rosa chinensis
RcHm_v2.0_Chr6g0290401 Rosa chinensis
Rhsim13G0027500 Rhododendron simsii
Sabra02G0040800 Salix brachista
Sabra05G0162600 Salix brachista
SalBow4G2779 Salvia bowleyana
SalBow7G1168 Salvia bowleyana
Sc05g0001180 Simmondsia chinensis
Sed0021970 Sechium edule
SEGI_19127 Sequoiadendron giganteum
SEGI_22603 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00513 Striga asiatica
SGA_v2.0_scaffold80G25747 Striga asiatica
SHI22269 Sapria himalayana
SMO358G0317 Selaginella moellendorffii
Solyc06g084160.4 Solanum lycopersicum
Solyc08g005140.3 Solanum lycopersicum
Sopen06g035540 Solanum pennellii
Sopen08g001150 Solanum pennellii
Sopen09g027260 Solanum pennellii
Sp2g21620 Schrenkiella parvula
Sp5g00290 Schrenkiella parvula
TAR362G0723 Trochodendron aralioides
TAR633G0687 Trochodendron aralioides
TAR633G1205 Trochodendron aralioides
TAR636G2941 Trochodendron aralioides
THA.LOC104817561 Tarenaya hassleriana
Thecc.01G273700 Theobroma cacao
Thhalv10004885m.g Eutrema salsugineum
TPR.G25688 Trifolium pratense
TWI39G0629 Tripterygium wilfordii
unitig_0.g135 Utricularia gibba
vmacro02598 Vaccinium macrocarpon
vmacro14906 Vaccinium macrocarpon
VMungo0540G0250 Vigna mungo
VMungo0720G0347 Vigna mungo
Zm00001eb031460 Zea mays
Zm00001eb222890 Zea mays
Zm00001eb432290 Zea mays

User provided reference genes

Program Settings