Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p31000 Brassica napus
A05p01790 Brassica napus
Aa31LG10G11180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.256 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.73 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_336.9 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2817 Anthoceros agrestis
Actinidia29749 Actinidia chinensis
Actinidia31615 Actinidia chinensis
Actinidia33880 Actinidia chinensis
Ah.16g104280 Amaranthus hybridus
AL4G38400 Arabidopsis lyrata
Aqoxy4G02363 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4BS23W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHXG56 Arachis hypogaea
AT2G40550 Arabidopsis thaliana
ATR0681G084 Amborella trichopoda
Atru.chr12.159 Acer truncatum
AUR62012360 Chenopodium quinoa
AUR62031489 Chenopodium quinoa
BcaB06g29150 Brassica carinata
BcaC02g07319 Brassica carinata
BcaC02g12598 Brassica carinata
BcaC04g23924 Brassica carinata
BolC1t04291H Brassica oleracea
BolC4t21721H Brassica oleracea
BolC9t58408H Brassica oleracea
BraA05t19176Z Brassica rapa
BraA10t43874Z Brassica rapa
C03p30700 Brassica napus
C04p02090 Brassica napus
C04p68390 Brassica napus
C07p45160 Brassica napus
C09p32190 Brassica napus
C09p55470 Brassica napus
CAN.G169.5 Capsicum annuum
CANSAT56G1075 Cannabis sativa
CARHR135660 Cardamine hirsuta
Carub.0004s2277 Capsella rubella
Ca_16870_v3 Cicer arietinum L.
CBR_g29836 Chara braunii
Cc02_g05520 Coffea canephora
CDE12G0671 Ceratophyllum demersum
Cfa001212 Carpinus fangiana
Ciclev10033572m.g Citrus clementina
CiPaw.01G306100 Carya illinoinensis
ClCG11G005730 Citrullus lanatus
COL.COLO4_19454 Corchorus olitorius
COL.COLO4_19455 Corchorus olitorius
Cpa.g.sc19.83 Carica papaya
Cre01.g030150 Chlamydomonas reinhardtii
CsaV3_6G002240 Cucumis sativus L.
CSS0019433 Camellia sinensis var. sinensis
CSS0047727 Camellia sinensis var. sinensis
DCAR_010519 Daucus carota
Dinv21784 Davidia involucrata
Dinv21831 Davidia involucrata
Dinv26060 Davidia involucrata
Duzib128G1614 Durio zibethinus
ECA233G3027 Erigeron canadensis
EL10Ac2g04254 Beta vulgaris
Eucgr.J00130 Eucalyptus grandis
FAN01G2723 Fragaria x ananassa
FAN03G3241 Fragaria x ananassa
FAN06G4224 Fragaria x ananassa
FAN10G2197 Fragaria x ananassa
FvH4_7g25850 Fragaria vesca
Glyma.04G222000 Glycine max
Glyma.06G143400 Glycine max
Gohir.A13G007600 Gossypium hirsutum
Gohir.D13G007700 Gossypium hirsutum
Gorai.013G008100 Gossypium raimondii
GSVIVG01032703001 Vitis vinifera
HanXRQChr02g0033011 Helianthus annuus
HanXRQChr03g0064211 Helianthus annuus
HanXRQChr08g0222571 Helianthus annuus
HanXRQChr15g0483741 Helianthus annuus
HanXRQChr17g0560771 Helianthus annuus
Haze_17351 Corylus avellana
Hma1.2p1_2838F.1_g329290 Hydrangea macrophylla
Hma1.2p1_2838F.1_g329300 Hydrangea macrophylla
HPP92_018094 Vanilla planifolia
Hund13464 Selenicereus undatus
Lalb_Chr08g0239111 Lupinus albus
Lalb_Chr11g0067831 Lupinus albus
Lj1g0018162 Lotus japonicus
Lj8C56T7 Lonicera japonica
Lsat_1_v5_gn_8_13521 Lactuca sativa
Manes.07G137600 Manihot esculenta
Mapoly0030s0020 Marchantia polymorpha
MBI11_g31297_MAGBIO Magnolia biondii
MBI15_g35105_MAGBIO Magnolia biondii
MCO09G187 Micromonas commoda
MD01G1166000 Malus domestica
MD01G1166300 Malus domestica
MD01G1183300 Malus domestica
MD07G1233000 Malus domestica
Medtr3g094070 Medicago truncatula
MELO3C020001.2 Cucumis melo
Migut.F01258 Erythranthe guttata
MSTRG.178 Avicennia marina
Nitab4.5_0000109g0520 Nicotiana tabacum
Nitab4.5_0003695g0010 Nicotiana tabacum
Nn1g07504 Nelumbo nucifera
Nn2g10346 Nelumbo nucifera
Nn5g26881 Nelumbo nucifera
Oeu054426.2 Olea europaea
Os01g0166800 Oryza sativa ssp. japonica
Peaxi162Scf00041g01211 Petunia axillaris
Peaxi162Scf00739g00014 Petunia axillaris
Peaxi162Scf00739g00019 Petunia axillaris
PGR142G0390 Punica granatum
PGSC0003DMG400024309 Solanum tuberosum
Phvul.009G142700 Phaseolus vulgaris
Potri.019G056200 Populus trichocarpa
Pp3c21_8640 Physcomitrium patens
PRCOL_00003324 Prasinoderma coloniale
Prupe.2G263500 Prunus persica
Psat5g069120 Pisum sativum
PSO339G1431 Papaver somniferum
PSO384G4442 Papaver somniferum
QL08p064773 Quercus lobata
RcHm_v2.0_Chr1g0372121 Rosa chinensis
Rhsim09G0184400 Rhododendron simsii
Sabra19G0071700 Salix brachista
SalBow5G1700 Salvia bowleyana
SalBow5G3937 Salvia bowleyana
Sc10g0002920 Simmondsia chinensis
Sed0017451 Sechium edule
SEGI_19414 Sequoiadendron giganteum
SGA_v2.0_scaffold275G46605 Striga asiatica
SHI28878 Sapria himalayana
SHI28879 Sapria himalayana
SHI28880 Sapria himalayana
SMO347G0133 Selaginella moellendorffii
SMO347G0333 Selaginella moellendorffii
Solyc06g050180.3 Solanum lycopersicum
Solyc06g050200.2 Solanum lycopersicum
Sp4g22880 Schrenkiella parvula
SpUn0061_0030 Schrenkiella parvula
TAR633G2654 Trochodendron aralioides
TAR636G0335 Trochodendron aralioides
TAR636G1150 Trochodendron aralioides
THA.LOC104803295 Tarenaya hassleriana
THA.LOC104812375 Tarenaya hassleriana
Thecc.10G183900 Theobroma cacao
Thhalv10016414m.g Eutrema salsugineum
TPR.G16138 Trifolium pratense
TWI09G0270 Tripterygium wilfordii
unitig_90.g27573 Utricularia gibba
vmacro09973 Vaccinium macrocarpon
VMungo1309G2839 Vigna mungo
Zm00001eb054590 Zea mays
Zm00001eb123270 Zea mays

User provided reference genes

Program Settings