Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26650 Brassica napus
A06p21630 Brassica napus
Aa31LG4G14120 Aethionema arabicum
Actinidia07172 Actinidia chinensis
Actinidia13489 Actinidia chinensis
Actinidia14009 Actinidia chinensis
Ah.15g090630 Amaranthus hybridus
AL5G23480 Arabidopsis lyrata
Aqoxy1G01159 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0C37N0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea
AT3G45020 Arabidopsis thaliana
ATR0152G025 Amborella trichopoda
Atru.chr10.811 Acer truncatum
Atru.chr10.822 Acer truncatum
AUR62014927 Chenopodium quinoa
AUR62034436 Chenopodium quinoa
AUR62040351 Chenopodium quinoa
AUR62042505 Chenopodium quinoa
BcaB01g01128 Brassica carinata
BcaB05g23055 Brassica carinata
BcaC01g02002 Brassica carinata
BcaC09g49679 Brassica carinata
BolC1t03372H Brassica oleracea
BolC3t19223H Brassica oleracea
BraA01t02596Z Brassica rapa
BraA06t25253Z Brassica rapa
C01p34030 Brassica napus
C03p69650 Brassica napus
CAN.G546.10 Capsicum annuum
CANSAT80G1575 Cannabis sativa
CARHR150950 Cardamine hirsuta
Carub.0005s1081 Capsella rubella
Ca_06514_v3 Cicer arietinum L.
Ca_08122_v3 Cicer arietinum L.
Ca_11503_v3 Cicer arietinum L.
Cc01_g10530 Coffea canephora
CDE02G4002 Ceratophyllum demersum
CDE09G0496 Ceratophyllum demersum
Cfa010341 Carpinus fangiana
Ciclev10002842m.g Citrus clementina
CiPaw.14G087800 Carya illinoinensis
ClCG02G021440 Citrullus lanatus
COL.COLO4_03696 Corchorus olitorius
Cpa.g.sc94.2 Carica papaya
CsaV3_4G002110 Cucumis sativus L.
CsaV3_6G014220 Cucumis sativus L.
CSS0038756 Camellia sinensis var. sinensis
DCAR_008992 Daucus carota
DCAR_013702 Daucus carota
Dinv29358 Davidia involucrata
Dinv37316 Davidia involucrata
Duzib150G1663 Durio zibethinus
ECA233G3649 Erigeron canadensis
ECA238G2603 Erigeron canadensis
EL10Ac7g16630 Beta vulgaris
EL10Ac9g22581 Beta vulgaris
Eucgr.B02540 Eucalyptus grandis
Eucgr.C00623 Eucalyptus grandis
FAN11G0015 Fragaria x ananassa
FAN16G0053 Fragaria x ananassa
FAN21G0726 Fragaria x ananassa
FAN25G2761 Fragaria x ananassa
FvH4_3g31090 Fragaria vesca
Glyma.03G099400 Glycine max
Glyma.10G055400 Glycine max
Gohir.A03G030600 Gossypium hirsutum
Gohir.D03G137800 Gossypium hirsutum
Gorai.003G144700 Gossypium raimondii
GSVIVG01031504001 Vitis vinifera
HanXRQChr14g0432111 Helianthus annuus
Haze_20543 Corylus avellana
Haze_23747 Corylus avellana
HPP92_025344 Vanilla planifolia
Hund01473 Selenicereus undatus
Hund12449 Selenicereus undatus
Lalb_Chr01g0004501 Lupinus albus
Lalb_Chr02g0155851 Lupinus albus
Lalb_Chr02g0155971 Lupinus albus
Lj3g0014185 Lotus japonicus
Lj5g0000803 Lotus japonicus
Lsat_1_v5_gn_2_99521 Lactuca sativa
Manes.04G015300 Manihot esculenta
Manes.15G173300 Manihot esculenta
MBI18_g16202_MAGBIO Magnolia biondii
MD00G1033500 Malus domestica
Medtr1g063230 Medicago truncatula
Medtr1g080050 Medicago truncatula
Medtr7g083650 Medicago truncatula
MELO3C026909.2 Cucumis melo
MELO3C033128.2 Cucumis melo
Migut.D02262 Erythranthe guttata
MSTRG.22442 Avicennia marina
Nitab4.5_0002033g0060 Nicotiana tabacum
Nitab4.5_0002186g0070 Nicotiana tabacum
Nn7g38187 Nelumbo nucifera
Nn7g38254 Nelumbo nucifera
Oeu013537.1 Olea europaea
Oeu014013.2 Olea europaea
Os09g0549700 Oryza sativa ssp. japonica
Peaxi162Scf00351g00053 Petunia axillaris
PGR083G1146 Punica granatum
PGR102G1962 Punica granatum
PGSC0003DMG400005521 Solanum tuberosum
PGSC0003DMG400008071 Solanum tuberosum
PGSC0003DMG400008072 Solanum tuberosum
PGSC0003DMG400008118 Solanum tuberosum
PGSC0003DMG400035806 Solanum tuberosum
Phvul.007G219200 Phaseolus vulgaris
Potri.004G214400 Populus trichocarpa
Prupe.6G108700 Prunus persica
Psat3g094560 Pisum sativum
Psat6g074200 Pisum sativum
PSO339G3989 Papaver somniferum
PSO801G0746 Papaver somniferum
QL01p015831 Quercus lobata
QL11p023169 Quercus lobata
RcHm_v2.0_Chr4g0444611 Rosa chinensis
RcHm_v2.0_Chr5g0057731 Rosa chinensis
Rhsim01G0212000 Rhododendron simsii
Rhsim13G0099000 Rhododendron simsii
Sabra04G0145500 Salix brachista
SalBow3G2862 Salvia bowleyana
Sc06g0010910 Simmondsia chinensis
Sc06g0010990 Simmondsia chinensis
Sc20g0005490 Simmondsia chinensis
Sed0008060 Sechium edule
SEGI_39147 Sequoiadendron giganteum
SGA_v2.0_scaffold263G45970 Striga asiatica
SHI02979 Sapria himalayana
SHI30132 Sapria himalayana
Solyc11g069080.3 Solanum lycopersicum
Sopen11g027800 Solanum pennellii
Sp5g16240 Schrenkiella parvula
TAR636G2244 Trochodendron aralioides
THA.LOC104810873 Tarenaya hassleriana
Thecc.09G348500 Theobroma cacao
Thhalv10002715m.g Eutrema salsugineum
TPR.G11257 Trifolium pratense
TPR.G21885 Trifolium pratense
TWI31G0427 Tripterygium wilfordii
TWI79G1159 Tripterygium wilfordii
vmacro14407 Vaccinium macrocarpon
VMungo0331G0086 Vigna mungo
VMungo0720G1193 Vigna mungo
Zm00001eb320920 Zea mays

User provided reference genes

Program Settings