Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05660 Brassica napus
Aa31LG8G10570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4219 Anthoceros agrestis
Actinidia11184 Actinidia chinensis
Ah.15g093660 Amaranthus hybridus
AL1G19180 Arabidopsis lyrata
Aqoxy2G03592 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YXN00 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N732CA Arachis hypogaea
AT1G08750 Arabidopsis thaliana
ATR0665G165 Amborella trichopoda
Atru.chr2.885 Acer truncatum
AUR62024000 Chenopodium quinoa
AUR62031783 Chenopodium quinoa
BcaB03g13316 Brassica carinata
BcaC07g41928 Brassica carinata
BolC5t29441H Brassica oleracea
BolC8t52512H Brassica oleracea
BraA06t23775Z Brassica rapa
C05p06830 Brassica napus
CAN.G449.74 Capsicum annuum
CAN.G577.1 Capsicum annuum
CANSAT54G2478 Cannabis sativa
CARHR008670 Cardamine hirsuta
Carub.0001s0809 Capsella rubella
Ca_02704_v3 Cicer arietinum L.
CBR_g39523 Chara braunii
Cc05_g09050 Coffea canephora
CDE06G0731 Ceratophyllum demersum
CDE07G1473 Ceratophyllum demersum
Cfa006386 Carpinus fangiana
Cfa024521 Carpinus fangiana
Ciclev10020437m.g Citrus clementina
Ciclev10020741m.g Citrus clementina
Ciclev10021087m.g Citrus clementina
Ciclev10021567m.g Citrus clementina
Ciclev10023432m.g Citrus clementina
Ciclev10024315m.g Citrus clementina
CiPaw.07G070600 Carya illinoinensis
ClCG06G009440 Citrullus lanatus
COL.COLO4_15415 Corchorus olitorius
Cpa.g.c41535 Carica papaya
Cpa.g.sc164.15 Carica papaya
Cpa.g.sc172.16 Carica papaya
Cre03.g153800 Chlamydomonas reinhardtii
CsaV3_1G045570 Cucumis sativus L.
CSS0029039 Camellia sinensis var. sinensis
DCAR_010735 Daucus carota
Dinv06277 Davidia involucrata
Duzib128G2034 Durio zibethinus
ECA248G2407 Erigeron canadensis
EL10Ac9g21026 Beta vulgaris
Eucgr.H00259 Eucalyptus grandis
Eucgr.L01375 Eucalyptus grandis
FAN02G1286 Fragaria x ananassa
FAN04G1391 Fragaria x ananassa
FAN05G2727 Fragaria x ananassa
FAN05G3615 Fragaria x ananassa
FAN08G1019 Fragaria x ananassa
FAN09G0888 Fragaria x ananassa
FAN13G2410 Fragaria x ananassa
FAN14G0694 Fragaria x ananassa
FAN14G4094 Fragaria x ananassa
FAN18G1570 Fragaria x ananassa
FvH4_2g07501 Fragaria vesca
FvH4_5g04770 Fragaria vesca
FvH4_6g02380 Fragaria vesca
FvH4_6g02400 Fragaria vesca
FvH4_6g02430 Fragaria vesca
Glyma.04G156000 Glycine max
Glyma.06G217200 Glycine max
Glyma.20G034600 Glycine max
Gohir.A11G250480 Gossypium hirsutum
Gohir.A11G250600 Gossypium hirsutum
Gorai.007G279800 Gossypium raimondii
GSVIVG01036218001 Vitis vinifera
HanXRQChr01g0015131 Helianthus annuus
Haze_04391 Corylus avellana
Haze_27491 Corylus avellana
HPP92_018816 Vanilla planifolia
Hund00823 Selenicereus undatus
Lalb_Chr08g0234301 Lupinus albus
Lj6g0025011 Lotus japonicus
Lj7A536T7 Lonicera japonica
Lj7A537T48 Lonicera japonica
Lsat_1_v5_gn_2_109700 Lactuca sativa
Lsat_1_v5_gn_5_179521 Lactuca sativa
Lsat_1_v5_gn_8_53341 Lactuca sativa
Lsat_1_v5_gn_8_58941 Lactuca sativa
Manes.07G069500 Manihot esculenta
Mapoly0069s0027 Marchantia polymorpha
Mapoly0092s0019 Marchantia polymorpha
Mapoly0092s0030 Marchantia polymorpha
Mapoly0092s0031 Marchantia polymorpha
MCO16G186 Micromonas commoda
MD04G1227700 Malus domestica
Medtr1g085630 Medicago truncatula
Medtr2g058550 Medicago truncatula
Medtr3g449450 Medicago truncatula
MELO3C024666.2 Cucumis melo
Migut.M00214 Erythranthe guttata
MSTRG.15061 Avicennia marina
Nitab4.5_0001402g0150 Nicotiana tabacum
Nitab4.5_0002027g0100 Nicotiana tabacum
Nn2g12710 Nelumbo nucifera
Oeu011324.1 Olea europaea
Oeu032125.1 Olea europaea
Oeu040969.1 Olea europaea
Os02g0219400 Oryza sativa ssp. japonica
Peaxi162Scf00035g03127 Petunia axillaris
PGR142G3409 Punica granatum
PGSC0003DMG400011460 Solanum tuberosum
PGSC0003DMG400011666 Solanum tuberosum
PGSC0003DMG400011672 Solanum tuberosum
PGSC0003DMG400021238 Solanum tuberosum
Phvul.011G079900 Phaseolus vulgaris
Potri.019G014000 Populus trichocarpa
Pp3c15_22470 Physcomitrium patens
Pp3c9_23730 Physcomitrium patens
Prupe.6G347300 Prunus persica
Psat0s4043g0080 Pisum sativum
PSO170G6485 Papaver somniferum
PSO528G0135 Papaver somniferum
QL03p029131 Quercus lobata
RcHm_v2.0_Chr3g0450151 Rosa chinensis
Rhsim06G0122800 Rhododendron simsii
Rhsim09G0040000 Rhododendron simsii
Sabra19G0016400 Salix brachista
Sabra19G0026700 Salix brachista
Sc21g0004350 Simmondsia chinensis
Sed0000709 Sechium edule
Sed0006035 Sechium edule
Sed0007432 Sechium edule
Sed0019802 Sechium edule
Sed0025298 Sechium edule
SEGI_24335 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34202 Striga asiatica
SGA_v2.0_scaffold130G34203 Striga asiatica
SHI26794 Sapria himalayana
SHI31377 Sapria himalayana
SHI31380 Sapria himalayana
SMO356G0549 Selaginella moellendorffii
Solyc10g007850.3 Solanum lycopersicum
Sopen10g003750 Solanum pennellii
Sp1g07390 Schrenkiella parvula
TAR636G3098 Trochodendron aralioides
THA.LOC104808029 Tarenaya hassleriana
Thecc.05G277000 Theobroma cacao
Thhalv10007907m.g Eutrema salsugineum
TPR.G15315 Trifolium pratense
TPR.G3069 Trifolium pratense
TWI56G0480 Tripterygium wilfordii
unitig_62.g23111 Utricularia gibba
vmacro12429 Vaccinium macrocarpon
Zm00001eb205610 Zea mays

User provided reference genes

Program Settings