Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p02940 Brassica napus
Aa31LG9G9140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis
Actinidia13483 Actinidia chinensis
Ah.02g113940 Amaranthus hybridus
AL6G49030 Arabidopsis lyrata
AL6G49110 Arabidopsis lyrata
Aqoxy7G03057 Aquilegia oxysepala
AT4G05440 Arabidopsis thaliana
ATR0584G072 Amborella trichopoda
Atru.chr10.946 Acer truncatum
Atru.chr10.952 Acer truncatum
Atru.chr10.956 Acer truncatum
AUR62001036 Chenopodium quinoa
AUR62004920 Chenopodium quinoa
AUR62008508 Chenopodium quinoa
AUR62021582 Chenopodium quinoa
BcaB01g01919 Brassica carinata
BcaC04g23945 Brassica carinata
BolC9t53233H Brassica oleracea
BraA09t35937Z Brassica rapa
C09p03030 Brassica napus
CAN.G1231.9 Capsicum annuum
CAN.G3385.2 Capsicum annuum
CANSAT64G0220 Cannabis sativa
CARHR252140 Cardamine hirsuta
Carub.0006s3335 Capsella rubella
Ca_02551_v3 Cicer arietinum L.
Ca_14146_v3 Cicer arietinum L.
CBR_g50844 Chara braunii
Cc02_g19240 Coffea canephora
CDE02G1350 Ceratophyllum demersum
Cfa020535 Carpinus fangiana
Ciclev10015850m.g Citrus clementina
CiPaw.12G121800 Carya illinoinensis
ClCG03G006380 Citrullus lanatus
COL.COLO4_17670 Corchorus olitorius
Cpa.g.sc17.70 Carica papaya
Cre07.g312100 Chlamydomonas reinhardtii
CsaV3_1G039230 Cucumis sativus L.
CSS0007960 Camellia sinensis var. sinensis
CSS0038452 Camellia sinensis var. sinensis
DCAR_005794 Daucus carota
Dinv15895 Davidia involucrata
Dinv32196 Davidia involucrata
Duzib248G0043 Durio zibethinus
ECA234G3378 Erigeron canadensis
ECA240G2987 Erigeron canadensis
EL10Ac5g11113 Beta vulgaris
Eucgr.E02475 Eucalyptus grandis
Eucgr.K03201 Eucalyptus grandis
FAN15G1860 Fragaria x ananassa
FAN24G0458 Fragaria x ananassa
FvH4_2g14961 Fragaria vesca
Glyma.02G261200 Glycine max
Glyma.02G261300 Glycine max
Glyma.14G055800 Glycine max
Gohir.A08G179300 Gossypium hirsutum
Gohir.D08G197900 Gossypium hirsutum
Gohir.D13G114400 Gossypium hirsutum
Gorai.004G208700 Gossypium raimondii
Gorai.013G128400 Gossypium raimondii
GSVIVG01021588001 Vitis vinifera
GSVIVG01027347001 Vitis vinifera
HanXRQChr03g0076141 Helianthus annuus
HanXRQChr04g0094771 Helianthus annuus
HanXRQChr11g0343411 Helianthus annuus
HanXRQChr11g0343421 Helianthus annuus
HanXRQChr12g0360561 Helianthus annuus
Haze_09496 Corylus avellana
Haze_09498 Corylus avellana
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla
HPP92_027351 Vanilla planifolia
HPP92_027352 Vanilla planifolia
Hund19582 Selenicereus undatus
Lalb_Chr12g0204271 Lupinus albus
Lalb_Chr12g0204311 Lupinus albus
Lj1P1166T28 Lonicera japonica
Lj2g0020778 Lotus japonicus
Lj6C128T1 Lonicera japonica
Lju897C0T7 Lonicera japonica
Lju897C2T5 Lonicera japonica
Lsat_1_v5_gn_9_95201 Lactuca sativa
Lsat_1_v5_gn_9_95240 Lactuca sativa
Manes.07G037300 Manihot esculenta
Manes.10G102700 Manihot esculenta
Mapoly0049s0079 Marchantia polymorpha
MBI09_g11913_MAGBIO Magnolia biondii
MBI10_g08558_MAGBIO Magnolia biondii
MCO03G595 Micromonas commoda
MD09G1087500 Malus domestica
MD17G1076300 Malus domestica
Medtr0393s0030 Medicago truncatula
Medtr2g048690 Medicago truncatula
Medtr3g010310 Medicago truncatula
Medtr8g072370 Medicago truncatula
MELO3C015347.2 Cucumis melo
Migut.B00386 Erythranthe guttata
Migut.N02733 Erythranthe guttata
MSTRG.16715 Avicennia marina
Nitab4.5_0002815g0050 Nicotiana tabacum
Nitab4.5_0005392g0050 Nicotiana tabacum
Oeu010398.1 Olea europaea
Oeu018596.1 Olea europaea
PGR031G3887 Punica granatum
PGSC0003DMG400025770 Solanum tuberosum
Phvul.009G217100 Phaseolus vulgaris
Potri.006G050600 Populus trichocarpa
Potri.007G112300 Populus trichocarpa
Potri.017G048600 Populus trichocarpa
Potri.017G049500 Populus trichocarpa
Pp3c20_22950 Physcomitrium patens
PRCOL_00002688 Prasinoderma coloniale
Prupe.1G099600 Prunus persica
Prupe.3G237900 Prunus persica
Psat0s5166g0080 Pisum sativum
Psat5g233520 Pisum sativum
Psat5g233560 Pisum sativum
PSO210G1456 Papaver somniferum
PSO210G6921 Papaver somniferum
PSO675G6933 Papaver somniferum
QL05p054004 Quercus lobata
QL05p054023 Quercus lobata
QL08p010099 Quercus lobata
RcHm_v2.0_Chr5g0015381 Rosa chinensis
RcHm_v2.0_Chr5g0052651 Rosa chinensis
RcHm_v2.0_Chr5g0052721 Rosa chinensis
Rhsim01G0266600 Rhododendron simsii
Rhsim13G0119600 Rhododendron simsii
Sabra07G0091800 Salix brachista
SalBow6G1352 Salvia bowleyana
Sc10g0000250 Simmondsia chinensis
Sc12g0003000 Simmondsia chinensis
Sc12g0003070 Simmondsia chinensis
Sed0000755 Sechium edule
SEGI_36860 Sequoiadendron giganteum
SGA_v2.0_scaffold172G38987 Striga asiatica
SMO144G0026 Selaginella moellendorffii
Sopen01g049820 Solanum pennellii
Sp6g03640 Schrenkiella parvula
TAR624G1057 Trochodendron aralioides
TAR626G0708 Trochodendron aralioides
THA.LOC104812357 Tarenaya hassleriana
Thecc.02G011000 Theobroma cacao
Thhalv10028820m.g Eutrema salsugineum
TPR.G33233 Trifolium pratense
TPR.G5080 Trifolium pratense
TWI53G1117 Tripterygium wilfordii
unitig_21.g20734 Utricularia gibba
vmacro03406 Vaccinium macrocarpon
vmacro08577 Vaccinium macrocarpon
VMungo1309G0019 Vigna mungo
VMungo1309G1961 Vigna mungo
Zm00001eb126310 Zea mays

User provided reference genes

Program Settings