Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08650 Brassica napus
A01p08660 Brassica napus
A06p04880 Brassica napus
A09p40550 Brassica napus
Aa31LG2G21070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4976 Anthoceros agrestis
Actinidia17515 Actinidia chinensis
Actinidia39776 Actinidia chinensis
Ah.09g230480 Amaranthus hybridus
Ah.09g230490 Amaranthus hybridus
AL7G23020 Arabidopsis lyrata
Aqoxy7G03607 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11NKIJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9BR2YY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U02M06 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YRLX64 Arachis hypogaea
AT4G29380 Arabidopsis thaliana
ATR0661G544 Amborella trichopoda
ATR0730G043 Amborella trichopoda
Atru.chr7.1477 Acer truncatum
AUR62010880 Chenopodium quinoa
AUR62021393 Chenopodium quinoa
BcaB08g34921 Brassica carinata
BcaC09g51723 Brassica carinata
BolC1t00970H Brassica oleracea
BraA01t00815Z Brassica rapa
BraA06t23692Z Brassica rapa
BraA09t39552Z Brassica rapa
C01p10120 Brassica napus
C07p57020 Brassica napus
C09p03160 Brassica napus
CAN.G787.12 Capsicum annuum
CANSAT56G3494 Cannabis sativa
CARHR237190 Cardamine hirsuta
Carub.0007s1117 Capsella rubella
Ca_19974_v3 Cicer arietinum L.
Ca_25581_v3 Cicer arietinum L.
Ca_25582_v3 Cicer arietinum L.
Ca_25584_v3 Cicer arietinum L.
CBR_g47981 Chara braunii
Cc06_g10590 Coffea canephora
CDE04G0916 Ceratophyllum demersum
CDE04G1922 Ceratophyllum demersum
CDE06G0341 Ceratophyllum demersum
Cfa003165 Carpinus fangiana
Ciclev10007242m.g Citrus clementina
CiPaw.03G223200 Carya illinoinensis
CiPaw.03G223300 Carya illinoinensis
CiPaw.04G155500 Carya illinoinensis
ClCG03G016070 Citrullus lanatus
COL.COLO4_34727 Corchorus olitorius
COL.COLO4_34728 Corchorus olitorius
Cpa.g.sc78.25 Carica papaya
Cre06.g290500 Chlamydomonas reinhardtii
CsaV3_1G039890 Cucumis sativus L.
CSS0000434 Camellia sinensis var. sinensis
CSS0026223 Camellia sinensis var. sinensis
DCAR_028653 Daucus carota
Dinv36675 Davidia involucrata
Dinv36676 Davidia involucrata
Dinv36677 Davidia involucrata
Dinv42256 Davidia involucrata
Duzib150G1241 Durio zibethinus
ECA240G2374 Erigeron canadensis
EL10Ac8g18369 Beta vulgaris
Eucgr.C03719 Eucalyptus grandis
FAN01G0060 Fragaria x ananassa
FAN03G2869 Fragaria x ananassa
FAN06G4551 Fragaria x ananassa
FvH4_7g05110 Fragaria vesca
Glyma.01G006600 Glycine max
Glyma.07G125200 Glycine max
Gohir.A05G026300 Gossypium hirsutum
Gohir.D05G027800 Gossypium hirsutum
Gorai.009G028000 Gossypium raimondii
GSVIVG01015287001 Vitis vinifera
HanXRQChr03g0061061 Helianthus annuus
Haze_25834 Corylus avellana
Hma1.2p1_0012F.1_g007400 Hydrangea macrophylla
Hma1.2p1_0386F.1_g141720 Hydrangea macrophylla
Hund09091 Selenicereus undatus
Hund26286 Selenicereus undatus
Lalb_Chr14g0371941 Lupinus albus
Lj2g0020264 Lotus japonicus
Lj7C667T4 Lonicera japonica
Lsat_1_v5_gn_0_39700 Lactuca sativa
Lsat_1_v5_gn_7_39580 Lactuca sativa
Manes.16G108000 Manihot esculenta
Mapoly0002s0158 Marchantia polymorpha
MBI15_g07764_MAGBIO Magnolia biondii
MCO11G423 Micromonas commoda
MD02G1262100 Malus domestica
MD07G1058300 Malus domestica
Medtr6g088835 Medicago truncatula
MELO3C015420.2 Cucumis melo
Migut.K00548 Erythranthe guttata
MSTRG.26388 Avicennia marina
Nitab4.5_0001242g0100 Nicotiana tabacum
Nitab4.5_0004673g0040 Nicotiana tabacum
Nitab4.5_0015727g0010 Nicotiana tabacum
Oeu018580.2 Olea europaea
Oeu021455.1 Olea europaea
Os02g0796700 Oryza sativa ssp. japonica
Peaxi162Scf01157g00011 Petunia axillaris
PGR102G2506 Punica granatum
PGSC0003DMG400023589 Solanum tuberosum
Phvul.004G175100 Phaseolus vulgaris
Potri.006G153100 Populus trichocarpa
Pp3c15_10000 Physcomitrium patens
Pp3c9_3860 Physcomitrium patens
PRCOL_00004168 Prasinoderma coloniale
Prupe.2G065200 Prunus persica
Psat1g048040 Pisum sativum
PSO210G2464 Papaver somniferum
PSO210G3406 Papaver somniferum
PSO832G2682 Papaver somniferum
QL02p040907 Quercus lobata
RcHm_v2.0_Chr1g0331571 Rosa chinensis
RcHm_v2.0_Chr1g0332471 Rosa chinensis
RcHm_v2.0_Chr1g0332481 Rosa chinensis
RcHm_v2.0_Chr1g0332491 Rosa chinensis
RcHm_v2.0_Chr1g0332501 Rosa chinensis
Rhsim05G0038900 Rhododendron simsii
Sabra06G0121300 Salix brachista
SalBow1G2004 Salvia bowleyana
Sc08g0008060 Simmondsia chinensis
Sed0000923 Sechium edule
SEGI_14388 Sequoiadendron giganteum
SEGI_30648 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08722 Striga asiatica
SHI02646 Sapria himalayana
SHI02647 Sapria himalayana
SHI02648 Sapria himalayana
SHI02649 Sapria himalayana
SHI02652 Sapria himalayana
SHI02653 Sapria himalayana
SMO347G0104 Selaginella moellendorffii
Solyc04g012170.4 Solanum lycopersicum
Sopen04g006260 Solanum pennellii
Sp7g27250 Schrenkiella parvula
TAR383G0360 Trochodendron aralioides
TAR626G1784 Trochodendron aralioides
TAR639G0003 Trochodendron aralioides
THA.LOC104814595 Tarenaya hassleriana
Thecc.09G099100 Theobroma cacao
Thhalv10024212m.g Eutrema salsugineum
TPR.G31000 Trifolium pratense
TWI32G0016 Tripterygium wilfordii
TWI34G0109 Tripterygium wilfordii
unitig_8.g4485 Utricularia gibba
vmacro10847 Vaccinium macrocarpon
VMungo0464G0426 Vigna mungo
VMungo0647G1969 Vigna mungo
Zm00001eb192340 Zea mays
Zm00001eb257890 Zea mays

User provided reference genes

Program Settings