Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p02980 Brassica napus
Aa31LG1G24270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2086 Anthoceros agrestis
Actinidia09562 Actinidia chinensis
Actinidia21194 Actinidia chinensis
Actinidia21195 Actinidia chinensis
Ah.11g049820 Amaranthus hybridus
AL4G40900 Arabidopsis lyrata
Aqoxy2G03613 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.58RJ2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9TYEM Arachis hypogaea
AT2G42450 Arabidopsis thaliana
ATR0680G188 Amborella trichopoda
Atru.chr5.1643 Acer truncatum
AUR62011896 Chenopodium quinoa
AUR62024737 Chenopodium quinoa
BcaB04g17273 Brassica carinata
BcaB07g32727 Brassica carinata
BcaC05g24991 Brassica carinata
BcaNung03240 Brassica carinata
BolC4t21995H Brassica oleracea
BraA05t19288Z Brassica rapa
C04p03600 Brassica napus
CAN.G771.23 Capsicum annuum
CANSAT01G0335 Cannabis sativa
CARHR137490 Cardamine hirsuta
Carub.0004s2484 Capsella rubella
Ca_09693_v3 Cicer arietinum L.
CBR_g36895 Chara braunii
CBR_g40789 Chara braunii
CBR_g51917 Chara braunii
Cc01_g18500 Coffea canephora
CDE05G0417 Ceratophyllum demersum
CDE05G0548 Ceratophyllum demersum
Cfa002398 Carpinus fangiana
Ciclev10019537m.g Citrus clementina
CiPaw.03G261600 Carya illinoinensis
ClCG09G008060 Citrullus lanatus
COL.COLO4_05604 Corchorus olitorius
Cpa.g.sc50.41 Carica papaya
Cre07.g325150 Chlamydomonas reinhardtii
Cre14.g622800 Chlamydomonas reinhardtii
CsaV3_7G027010 Cucumis sativus L.
CSS0022255 Camellia sinensis var. sinensis
DCAR_001216 Daucus carota
DCAR_002681 Daucus carota
DCAR_012532 Daucus carota
Dinv34600 Davidia involucrata
Duzib133G0290 Durio zibethinus
Duzib211G0524 Durio zibethinus
ECA248G1706 Erigeron canadensis
EL10Ac5g10422 Beta vulgaris
Eucgr.B01530 Eucalyptus grandis
FAN15G0403 Fragaria x ananassa
FAN20G0807 Fragaria x ananassa
FAN24G1514 Fragaria x ananassa
FAN27G1042 Fragaria x ananassa
FAN27G2220 Fragaria x ananassa
FvH4_2g21920 Fragaria vesca
Glyma.10G035200 Glycine max
Glyma.13G121500 Glycine max
Gohir.A08G189200 Gossypium hirsutum
Gohir.D08G207700 Gossypium hirsutum
Gohir.D11G135200 Gossypium hirsutum
Gorai.004G220100 Gossypium raimondii
Gorai.007G144700 Gossypium raimondii
GSVIVG01028293001 Vitis vinifera
GSVIVG01035735001 Vitis vinifera
HanXRQChr01g0014351 Helianthus annuus
HanXRQChr09g0249261 Helianthus annuus
Haze_14996 Corylus avellana
Haze_24596 Corylus avellana
Hma1.2p1_0273F.1_g109910 Hydrangea macrophylla
Hma1.2p1_0273F.1_g109920 Hydrangea macrophylla
HPP92_007154 Vanilla planifolia
Hund09589 Selenicereus undatus
Lalb_Chr06g0162481 Lupinus albus
Lj1A64T37 Lonicera japonica
Lj5g0027127 Lotus japonicus
Lsat_1_v5_gn_2_26340 Lactuca sativa
Lsat_1_v5_gn_4_28641 Lactuca sativa
Lsat_1_v5_gn_5_182081 Lactuca sativa
Lsat_1_v5_gn_6_62980 Lactuca sativa
Lsat_1_v5_gn_7_30320 Lactuca sativa
Manes.12G030800 Manihot esculenta
Mapoly0007s0153 Marchantia polymorpha
Mapoly0041s0124 Marchantia polymorpha
MBI18_g37354_MAGBIO Magnolia biondii
MBI18_g37355_MAGBIO Magnolia biondii
MCO14G384 Micromonas commoda
MD05G1200600 Malus domestica
MD10G1187200 Malus domestica
Medtr1g070195 Medicago truncatula
MELO3C012746.2 Cucumis melo
Migut.N02195 Erythranthe guttata
Nitab4.5_0000086g0140 Nicotiana tabacum
Nitab4.5_0004303g0040 Nicotiana tabacum
Nn3g19610 Nelumbo nucifera
Oeu026229.2 Olea europaea
Os09g0571500 Oryza sativa ssp. japonica
Peaxi162Scf00134g00912 Petunia axillaris
Peaxi162Scf01530g00029 Petunia axillaris
PGR031G0841 Punica granatum
PGSC0003DMG400020145 Solanum tuberosum
Phvul.007G194900 Phaseolus vulgaris
Potri.002G041000 Populus trichocarpa
Potri.005G222000 Populus trichocarpa
Pp3c21_10810 Physcomitrium patens
Pp3c22_2890 Physcomitrium patens
Pp3c22_5940 Physcomitrium patens
Pp3c4_30500 Physcomitrium patens
Pp3c4_30510 Physcomitrium patens
Pp3c4_30520 Physcomitrium patens
Pp3c8_13590 Physcomitrium patens
Pp3c8_16570 Physcomitrium patens
Prupe.8G227200 Prunus persica
Psat0s4441g0040 Pisum sativum
Psat0s484g0120 Pisum sativum
PSO017G3851 Papaver somniferum
PSO063G5405 Papaver somniferum
QL10p040829 Quercus lobata
QL10p040832 Quercus lobata
RcHm_v2.0_Chr6g0288821 Rosa chinensis
Rhsim01G0266000 Rhododendron simsii
Sabra02G0032600 Salix brachista
Sabra05G0170600 Salix brachista
SalBow6G6555 Salvia bowleyana
Sc17g0000770 Simmondsia chinensis
Sed0006871 Sechium edule
SEGI_11819 Sequoiadendron giganteum
SEGI_27612 Sequoiadendron giganteum
SEGI_29774 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25776 Striga asiatica
SGA_v2.0_scaffold98G29344 Striga asiatica
SHI03437 Sapria himalayana
SHI04984 Sapria himalayana
SHI11405 Sapria himalayana
SHI22837 Sapria himalayana
SHI27055 Sapria himalayana
SHI30105 Sapria himalayana
SMO147G0111 Selaginella moellendorffii
Solyc06g083920.4 Solanum lycopersicum
Sopen06g035320 Solanum pennellii
Sp4g24590 Schrenkiella parvula
TAR362G0996 Trochodendron aralioides
THA.LOC104802241 Tarenaya hassleriana
Thecc.01G261600 Theobroma cacao
Thhalv10016471m.g Eutrema salsugineum
TPR.G3576 Trifolium pratense
TPR.G3586 Trifolium pratense
TWI18G0451 Tripterygium wilfordii
unitig_37.g12601 Utricularia gibba
vmacro14850 Vaccinium macrocarpon
VMungo0720G0257 Vigna mungo
Zm00001eb095800 Zea mays

User provided reference genes

Program Settings