Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13130 Brassica napus
A08p15460 Brassica napus
Aa31LG6G3810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1659 Anthoceros agrestis
Actinidia13350 Actinidia chinensis
Actinidia14251 Actinidia chinensis
Actinidia14252 Actinidia chinensis
Ah.13g071260 Amaranthus hybridus
AL7G32130 Arabidopsis lyrata
Aqoxy1G00958 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08UNPH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3R6CDR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI16ME Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YK8CX2 Arachis hypogaea
AT4G21800 Arabidopsis thaliana
ATR0693G032 Amborella trichopoda
Atru.chr4.3050 Acer truncatum
AUR62005917 Chenopodium quinoa
AUR62028146 Chenopodium quinoa
AUR62041770 Chenopodium quinoa
BcaC01g00741 Brassica carinata
BcaC09g51199 Brassica carinata
BcaNung02248 Brassica carinata
BolC1t01536H Brassica oleracea
BolC3t20652H Brassica oleracea
BraA01t01257Z Brassica rapa
BraA08t33522Z Brassica rapa
C01p15820 Brassica napus
C03p83720 Brassica napus
C07p51410 Brassica napus
CAN.G532.7 Capsicum annuum
CANSAT11G0071 Cannabis sativa
CARHR228550 Cardamine hirsuta
CARHR228600 Cardamine hirsuta
Carub.0007s1960 Capsella rubella
Ca_10737_v3 Cicer arietinum L.
CBR_g44475 Chara braunii
Cc02_g31810 Coffea canephora
CDE02G1224 Ceratophyllum demersum
CDE08G0400 Ceratophyllum demersum
CDE08G0804 Ceratophyllum demersum
Cfa014134 Carpinus fangiana
Cfa026321 Carpinus fangiana
Ciclev10005025m.g Citrus clementina
CiPaw.01G136300 Carya illinoinensis
CiPaw.02G073100 Carya illinoinensis
ClCG11G010380 Citrullus lanatus
COL.COLO4_15791 Corchorus olitorius
Cpa.g.sc106.97 Carica papaya
Cre06.g267150 Chlamydomonas reinhardtii
CsaV3_2G009980 Cucumis sativus L.
CSS0022958 Camellia sinensis var. sinensis
CSS0038246 Camellia sinensis var. sinensis
CSS0044945 Camellia sinensis var. sinensis
DCAR_026992 Daucus carota
DCAR_030456 Daucus carota
Dinv15143 Davidia involucrata
Duzib052G0525 Durio zibethinus
Duzib151G0494 Durio zibethinus
ECA246G2874 Erigeron canadensis
EL10Ac7g16373 Beta vulgaris
Eucgr.K01628 Eucalyptus grandis
FAN07G1280 Fragaria x ananassa
FAN12G1239 Fragaria x ananassa
FAN17G3131 Fragaria x ananassa
FAN22G0862 Fragaria x ananassa
FvH4_4g12660 Fragaria vesca
Glyma.07G237800 Glycine max
Glyma.17G035700 Glycine max
Gohir.A09G223200 Gossypium hirsutum
Gohir.D09G225200 Gossypium hirsutum
Gorai.006G246700 Gossypium raimondii
GSVIVG01034965001 Vitis vinifera
HanXRQChr08g0212681 Helianthus annuus
HanXRQChr10g0314441 Helianthus annuus
HanXRQChr17g0569351 Helianthus annuus
Haze_01330 Corylus avellana
Haze_22859 Corylus avellana
Haze_27364 Corylus avellana
Hma1.2p1_0013F.1_g008320 Hydrangea macrophylla
Hma1.2p1_0078F.1_g039880 Hydrangea macrophylla
Hma1.2p1_1168F.1_g263150 Hydrangea macrophylla
Hma1.2p1_1400F.1_g280890 Hydrangea macrophylla
Hma1.2p1_4126F.1_g338340 Hydrangea macrophylla
HPP92_008928 Vanilla planifolia
HPP92_008940 Vanilla planifolia
Hund18596 Selenicereus undatus
Lalb_Chr07g0181981 Lupinus albus
Lj4g0011402 Lotus japonicus
Lj6A693T62 Lonicera japonica
Lj6C561G5 Lonicera japonica
Lju912A2T64 Lonicera japonica
Lsat_1_v5_gn_9_58140 Lactuca sativa
Manes.08G074300 Manihot esculenta
Manes.09G084300 Manihot esculenta
Mapoly0080s0030 Marchantia polymorpha
MBI19_g03265_MAGBIO Magnolia biondii
MCO13G184 Micromonas commoda
MD12G1007400 Malus domestica
MD13G1150100 Malus domestica
MD14G1004700 Malus domestica
MD16G1150500 Malus domestica
Medtr1g100240 Medicago truncatula
MELO3C008635.2 Cucumis melo
MELO3C012760.2 Cucumis melo
Migut.A01124 Erythranthe guttata
MSTRG.12116 Avicennia marina
Nitab4.5_0001220g0090 Nicotiana tabacum
Nitab4.5_0006920g0020 Nicotiana tabacum
Nn3g21759 Nelumbo nucifera
Nn4g25537 Nelumbo nucifera
Oeu061088.1 Olea europaea
Peaxi162Scf00074g02033 Petunia axillaris
PGR031G3778 Punica granatum
PGSC0003DMG400012333 Solanum tuberosum
Phvul.003G116600 Phaseolus vulgaris
Potri.008G103000 Populus trichocarpa
Potri.010G148000 Populus trichocarpa
Pp3c8_16870 Physcomitrium patens
PRCOL_00000431 Prasinoderma coloniale
Prupe.1G114400 Prunus persica
Psat6g193640 Pisum sativum
PSO063G4024 Papaver somniferum
PSO210G5482 Papaver somniferum
PSO210G7457 Papaver somniferum
QL04p048178 Quercus lobata
QL06p012791 Quercus lobata
RcHm_v2.0_Chr4g0411531 Rosa chinensis
Rhsim10G0104300 Rhododendron simsii
Sabra08G0077900 Salix brachista
Sabra10G0114100 Salix brachista
SalBow1G5780 Salvia bowleyana
SalBow7G1269 Salvia bowleyana
Sc17g0002650 Simmondsia chinensis
Sed0005907 Sechium edule
Sed0018873 Sechium edule
SEGI_28650 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11759 Striga asiatica
SMO271G0158 Selaginella moellendorffii
Solyc08g081330.4 Solanum lycopersicum
Sopen08g029650 Solanum pennellii
Sp7g19970 Schrenkiella parvula
TAR362G1144 Trochodendron aralioides
TAR633G2406 Trochodendron aralioides
THA.LOC104827101 Tarenaya hassleriana
Thecc.04G246100 Theobroma cacao
Thhalv10025484m.g Eutrema salsugineum
TPR.G27004 Trifolium pratense
TWI73G0343 Tripterygium wilfordii
unitig_578.g15956 Utricularia gibba
unitig_578.g15957 Utricularia gibba
vmacro12071 Vaccinium macrocarpon
vmacro15173 Vaccinium macrocarpon
VMungo0720G2504 Vigna mungo
Zm00001eb395880 Zea mays

User provided reference genes

Program Settings