Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36250 Brassica napus
A05p39880 Brassica napus
Aa31LG5G18930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3594 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.215 Anthoceros agrestis
Actinidia11569 Actinidia chinensis
Actinidia29088 Actinidia chinensis
Actinidia29495 Actinidia chinensis
Ah.02g115550 Amaranthus hybridus
AL3G19980 Arabidopsis lyrata
Aqoxy7G03079 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R9K5QN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1NNDF Arachis hypogaea
AT3G08960 Arabidopsis thaliana
ATR0681G361 Amborella trichopoda
Atru.chr8.2277 Acer truncatum
AUR62010444 Chenopodium quinoa
AUR62030473 Chenopodium quinoa
BcaC01g04209 Brassica carinata
BcaC05g29630 Brassica carinata
BolC3t16657H Brassica oleracea
BolC5t34545H Brassica oleracea
BraA03t12796Z Brassica rapa
BraSC256t45936Z Brassica rapa
C03p43890 Brassica napus
C05p58920 Brassica napus
CAN.G1246.1 Capsicum annuum
CAN.G5.1 Capsicum annuum
CAN.G5.2 Capsicum annuum
CAN.G610.28 Capsicum annuum
CAN.G740.7 Capsicum annuum
CANSAT56G3938 Cannabis sativa
CARHR083300 Cardamine hirsuta
Carub.0003s0809 Capsella rubella
Ca_07663_v3 Cicer arietinum L.
CBR_g41052 Chara braunii
CBR_g44557 Chara braunii
CBR_g44565 Chara braunii
Cc06_g01090 Coffea canephora
CDE08G1427 Ceratophyllum demersum
Cfa017175 Carpinus fangiana
Ciclev10010971m.g Citrus clementina
CiPaw.09G211600 Carya illinoinensis
ClCG05G011270 Citrullus lanatus
ClCG05G011300 Citrullus lanatus
ClCG05G011310 Citrullus lanatus
COL.COLO4_14503 Corchorus olitorius
COL.COLO4_14504 Corchorus olitorius
Cpa.g.sc120.51 Carica papaya
Cpa.g.sc120.53 Carica papaya
Cre02.g078885 Chlamydomonas reinhardtii
Cre02.g084650 Chlamydomonas reinhardtii
CsaV3_3G021150 Cucumis sativus L.
CSS0006394 Camellia sinensis var. sinensis
CSS0013285 Camellia sinensis var. sinensis
DCAR_015390 Daucus carota
DCAR_018683 Daucus carota
Dinv13139 Davidia involucrata
Dinv16904 Davidia involucrata
Dinv16905 Davidia involucrata
Duzib093G0324 Durio zibethinus
Duzib128G0341 Durio zibethinus
ECA236G1680 Erigeron canadensis
EL10Ac5g12532 Beta vulgaris
Eucgr.A00543 Eucalyptus grandis
FAN12G3124 Fragaria x ananassa
FAN17G0995 Fragaria x ananassa
FAN17G1409 Fragaria x ananassa
FAN22G0460 Fragaria x ananassa
FvH4_4g00010 Fragaria vesca
Glyma.07G152800 Glycine max
Glyma.16G097051 Glycine max
Glyma.16G097102 Glycine max
Glyma.16G097152 Glycine max
Glyma.18G203900 Glycine max
Gohir.A01G226580 Gossypium hirsutum
Gohir.A04G093500 Gossypium hirsutum
Gohir.D01G216126 Gossypium hirsutum
Gohir.D01G216252 Gossypium hirsutum
Gohir.D04G132800 Gossypium hirsutum
Gorai.002G262500 Gossypium raimondii
Gorai.012G116700 Gossypium raimondii
GSVIVG01003936001 Vitis vinifera
GSVIVG01003938001 Vitis vinifera
HanXRQChr12g0383171 Helianthus annuus
Haze_21030 Corylus avellana
HPP92_001053 Vanilla planifolia
HPP92_001054 Vanilla planifolia
HPP92_001120 Vanilla planifolia
Hund10978 Selenicereus undatus
Lalb_Chr19g0124371 Lupinus albus
Lj1g0027952 Lotus japonicus
Lj3A949T17 Lonicera japonica
Lj3A949T18 Lonicera japonica
Lj3C949T2 Lonicera japonica
Lsat_1_v5_gn_5_53800 Lactuca sativa
Lsat_1_v5_gn_5_55000 Lactuca sativa
Lsat_1_v5_gn_5_87500 Lactuca sativa
Lsat_1_v5_gn_8_100840 Lactuca sativa
Manes.09G106500 Manihot esculenta
Mapoly0056s0005 Marchantia polymorpha
MBI01_g36267_MAGBIO Magnolia biondii
MBI01_g40022_MAGBIO Magnolia biondii
MD04G1000200 Malus domestica
MD04G1000400 Malus domestica
Medtr7g069460 Medicago truncatula
MELO3C020253.2 Cucumis melo
Migut.J00134 Erythranthe guttata
MSTRG.10207 Avicennia marina
Nitab4.5_0000195g0230 Nicotiana tabacum
Nitab4.5_0009417g0010 Nicotiana tabacum
Nn2g10907 Nelumbo nucifera
Oeu033576.1 Olea europaea
Oeu063393.2 Olea europaea
Os03g0292900 Oryza sativa ssp. japonica
Os07g0693400 Oryza sativa ssp. japonica
Peaxi162Scf01132g00141 Petunia axillaris
PGR031G3962 Punica granatum
PGSC0003DMG400006259 Solanum tuberosum
Phvul.008G095700 Phaseolus vulgaris
Potri.016G119900 Populus trichocarpa
Pp3c14_210 Physcomitrium patens
Pp3c2_22550 Physcomitrium patens
PRCOL_00000669 Prasinoderma coloniale
Prupe.1G000100 Prunus persica
Prupe.1G000300 Prunus persica
Psat2g043480 Pisum sativum
Psat3g125960 Pisum sativum
Psat3g181680 Pisum sativum
PSO339G1342 Papaver somniferum
PSO801G0820 Papaver somniferum
QL07p034923 Quercus lobata
Rhsim05G0217800 Rhododendron simsii
Sabra16G0115800 Salix brachista
SalBow5G0496 Salvia bowleyana
Sc01g0006870 Simmondsia chinensis
Sed0023855 Sechium edule
SEGI_11102 Sequoiadendron giganteum
SEGI_16247 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26719 Striga asiatica
SMO232G0101 Selaginella moellendorffii
SMO241G0033 Selaginella moellendorffii
Sopen09g001110 Solanum pennellii
Sp3g07380 Schrenkiella parvula
TAR633G1894 Trochodendron aralioides
THA.LOC104823290 Tarenaya hassleriana
Thecc.05G012200 Theobroma cacao
Thhalv10019980m.g Eutrema salsugineum
TPR.G35441 Trifolium pratense
TWI74G1023 Tripterygium wilfordii
TWI77G0319 Tripterygium wilfordii
unitig_26.g9084 Utricularia gibba
vmacro20299 Vaccinium macrocarpon
VMungo1383G1310 Vigna mungo
Zm00001eb111960 Zea mays

User provided reference genes

Program Settings