Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11430 Brassica napus
A09p61430 Brassica napus
Aa31LG7G150 Aethionema arabicum
Actinidia01762 Actinidia chinensis
Actinidia15789 Actinidia chinensis
AL1G27500 Arabidopsis lyrata
Aqoxy7G02118 Aquilegia oxysepala
Aqoxy7G02119 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1TA14L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8B3Q96 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9IE0L2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYL5YU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3QYYY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W67IMC Arachis hypogaea
AT1G15390 Arabidopsis thaliana
ATR1156G012 Amborella trichopoda
Atru.chr1.3054 Acer truncatum
AUR62011549 Chenopodium quinoa
AUR62016368 Chenopodium quinoa
BcaB03g14542 Brassica carinata
BcaC01g05769 Brassica carinata
BcaC05g25480 Brassica carinata
BcaC05g25486 Brassica carinata
BcaC07g41503 Brassica carinata
BolC5t30092H Brassica oleracea
BolC8t52045H Brassica oleracea
BraA06t24321Z Brassica rapa
BraA09t41514Z Brassica rapa
C05p13550 Brassica napus
C08p44990 Brassica napus
CAN.G1158.5 Capsicum annuum
CANSAT56G2452 Cannabis sativa
CARHR015930 Cardamine hirsuta
Carub.0001s1517 Capsella rubella
Ca_01071_v3 Cicer arietinum L.
Ca_20430_v3 Cicer arietinum L.
Ca_29515_v3 Cicer arietinum L.
CBR_g8594 Chara braunii
Cc04_g04150 Coffea canephora
CDE04G3151 Ceratophyllum demersum
Cfa001995 Carpinus fangiana
Ciclev10026288m.g Citrus clementina
CiPaw.01G245300 Carya illinoinensis
ClCG07G012760 Citrullus lanatus
COL.COLO4_12918 Corchorus olitorius
Cpa.g.sc10.231 Carica papaya
Cpa.g.sc10.232 Carica papaya
Cre03.g172100 Chlamydomonas reinhardtii
CsaV3_4G001440 Cucumis sativus L.
CSS0020299 Camellia sinensis var. sinensis
CSS0024051 Camellia sinensis var. sinensis
DCAR_025491 Daucus carota
Dinv30579 Davidia involucrata
Duzib235G0601 Durio zibethinus
ECA232G3489 Erigeron canadensis
ECA233G1751 Erigeron canadensis
ECA234G1027 Erigeron canadensis
ECA234G2450 Erigeron canadensis
ECA238G0294 Erigeron canadensis
ECA238G2546 Erigeron canadensis
ECA238G4104 Erigeron canadensis
ECA240G0712 Erigeron canadensis
ECA246G2906 Erigeron canadensis
ECA248G1182 Erigeron canadensis
EL10Ac9g21930 Beta vulgaris
Eucgr.F02539 Eucalyptus grandis
FAN02G3524 Fragaria x ananassa
FAN09G2173 Fragaria x ananassa
FAN14G5774 Fragaria x ananassa
FvH4_6g30190 Fragaria vesca
Glyma.08G210900 Glycine max
Glyma.15G009700 Glycine max
Gohir.A10G075700 Gossypium hirsutum
Gohir.D10G075900 Gossypium hirsutum
Gorai.011G081700 Gossypium raimondii
GSVIVG01017280001 Vitis vinifera
HanXRQChr05g0131081 Helianthus annuus
HanXRQChr10g0303121 Helianthus annuus
HanXRQChr16g0500481 Helianthus annuus
Haze_16523 Corylus avellana
Hma1.2p1_0394F.1_g143470 Hydrangea macrophylla
HPP92_024132 Vanilla planifolia
Hund06573 Selenicereus undatus
Lalb_Chr01g0012481 Lupinus albus
Lalb_Chr14g0373711 Lupinus albus
Lj3g0003662 Lotus japonicus
Lj3g0018837 Lotus japonicus
Lj9A502G38 Lonicera japonica
Lj9A53G21 Lonicera japonica
Lj9C59T8 Lonicera japonica
Lj9C59T9 Lonicera japonica
Lsat_1_v5_gn_4_105820 Lactuca sativa
Lsat_1_v5_gn_5_132160 Lactuca sativa
Manes.11G053800 Manihot esculenta
Mapoly0061s0037 Marchantia polymorpha
Mapoly0285s0003 Marchantia polymorpha
MBI04_g07638_MAGBIO Magnolia biondii
MCO13G487 Micromonas commoda
MD13G1165900 Malus domestica
MD13G1166000 Malus domestica
MD17G1207300 Malus domestica
MD17G1207400 Malus domestica
Medtr2g103420 Medicago truncatula
Medtr2g103430 Medicago truncatula
Medtr4g011040 Medicago truncatula
MELO3C017896.2 Cucumis melo
Migut.I00794 Erythranthe guttata
MSTRG.22729 Avicennia marina
Nitab4.5_0000413g0130 Nicotiana tabacum
Nitab4.5_0009683g0020 Nicotiana tabacum
Nn8g39406 Nelumbo nucifera
Oeu000434.1 Olea europaea
Os01g0555800 Oryza sativa ssp. japonica
Peaxi162Scf00320g00617 Petunia axillaris
Peaxi162Scf00320g00620 Petunia axillaris
PGR102G0579 Punica granatum
PGSC0003DMG400029962 Solanum tuberosum
Phvul.005G175900 Phaseolus vulgaris
Phvul.010G154200 Phaseolus vulgaris
Potri.001G171800 Populus trichocarpa
Pp3c1_9250 Physcomitrium patens
Pp3c2_27110 Physcomitrium patens
PRCOL_00006240 Prasinoderma coloniale
Prupe.3G081800 Prunus persica
Psat5g301200 Pisum sativum
Psat7g255920 Pisum sativum
PSO170G2068 Papaver somniferum
PSO455G0289 Papaver somniferum
QL05p028225 Quercus lobata
RcHm_v2.0_Chr2g0136431 Rosa chinensis
RcHm_v2.0_Chr2g0163901 Rosa chinensis
Rhsim08G0215400 Rhododendron simsii
Sabra01G0139800 Salix brachista
SalBow2G2198 Salvia bowleyana
Sc06g0004020 Simmondsia chinensis
Sed0026286 Sechium edule
SGA_v2.0_scaffold5G02669 Striga asiatica
SMO229G0001 Selaginella moellendorffii
Solyc07g015860.3 Solanum lycopersicum
Sopen07g005700 Solanum pennellii
Sp1g13740 Schrenkiella parvula
TAR636G0831 Trochodendron aralioides
THA.LOC104808227 Tarenaya hassleriana
Thecc.06G070400 Theobroma cacao
Thhalv10008467m.g Eutrema salsugineum
TPR.G37193 Trifolium pratense
TPR.G38663 Trifolium pratense
TWI12G1169 Tripterygium wilfordii
TWI18G0786 Tripterygium wilfordii
unitig_747.g21294 Utricularia gibba
vmacro18973 Vaccinium macrocarpon
VMungo0331G1340 Vigna mungo
VMungo0464G0441 Vigna mungo
VMungo1080G0321 Vigna mungo
Zm00001eb329240 Zea mays

User provided reference genes

Program Settings