Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06240 Brassica napus
A06p40720 Brassica napus
Aa31LG2G18030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.465 Anthoceros agrestis
Actinidia13212 Actinidia chinensis
Actinidia13213 Actinidia chinensis
Ah.14g079380 Amaranthus hybridus
Ah.14g079390 Amaranthus hybridus
AL7G19840 Arabidopsis lyrata
Aqoxy7G03541 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8I84Z2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGG0U4 Arachis hypogaea
AT4G32050 Arabidopsis thaliana
ATR0767G197 Amborella trichopoda
Atru.chr7.2497 Acer truncatum
AUR62012029 Chenopodium quinoa
AUR62015365 Chenopodium quinoa
BcaC06g30944 Brassica carinata
BcaC06g30946 Brassica carinata
BcaC06g33762 Brassica carinata
BcaC07g41939 Brassica carinata
BcaC09g51994 Brassica carinata
BcaNung03134 Brassica carinata
BolC1t00685H Brassica oleracea
BolC7t44231H Brassica oleracea
BolC8t47068H Brassica oleracea
BraA01t00591Z Brassica rapa
BraA06t26993Z Brassica rapa
C01p06880 Brassica napus
C07p37210 Brassica napus
C08p02720 Brassica napus
C08p49950 Brassica napus
CAN.G326.4 Capsicum annuum
CAN.G435.2 Capsicum annuum
CANSAT01G0649 Cannabis sativa
CARHR239950 Cardamine hirsuta
Carub.0007s0850 Capsella rubella
Ca_15759_v3 Cicer arietinum L.
CBR_g34813 Chara braunii
Cc08_g00230 Coffea canephora
CDE05G1537 Ceratophyllum demersum
Cfa013106 Carpinus fangiana
Ciclev10007726m.g Citrus clementina
CiPaw.08G008500 Carya illinoinensis
ClCG05G016620 Citrullus lanatus
COL.COLO4_18909 Corchorus olitorius
COL.COLO4_18910 Corchorus olitorius
Cpa.g.sc187.23 Carica papaya
Cpa.g.sc187.24 Carica papaya
Cre07.g323650 Chlamydomonas reinhardtii
CsaV3_4G016180 Cucumis sativus L.
CsaV3_4G036900 Cucumis sativus L.
CsaV3_5G015120 Cucumis sativus L.
CSS0007985 Camellia sinensis var. sinensis
DCAR_000575 Daucus carota
DCAR_000578 Daucus carota
DCAR_000580 Daucus carota
DCAR_000582 Daucus carota
Dinv18155 Davidia involucrata
Dinv18156 Davidia involucrata
ECA248G1191 Erigeron canadensis
EL10Ac3g06914 Beta vulgaris
Eucgr.C01625 Eucalyptus grandis
Eucgr.C01702 Eucalyptus grandis
Eucgr.L02780 Eucalyptus grandis
FAN09G4690 Fragaria x ananassa
FAN14G1088 Fragaria x ananassa
FAN15G0776 Fragaria x ananassa
FAN20G1207 Fragaria x ananassa
FAN24G2392 Fragaria x ananassa
FAN27G1080 Fragaria x ananassa
FvH4_2g28330 Fragaria vesca
FvH4_6g32120 Fragaria vesca
Glyma.02G001200 Glycine max
Glyma.02G173300 Glycine max
Gohir.A06G099700 Gossypium hirsutum
Gohir.D06G101900 Gossypium hirsutum
Gorai.010G116900 Gossypium raimondii
GSVIVG01011258001 Vitis vinifera
GSVIVG01035922001 Vitis vinifera
HanXRQChr01g0030631 Helianthus annuus
Haze_21464 Corylus avellana
HPP92_003269 Vanilla planifolia
Hund06750 Selenicereus undatus
Lalb_Chr08g0244261 Lupinus albus
Lj1g0018058 Lotus japonicus
Lj1g0024423 Lotus japonicus
Lj8C731T12 Lonicera japonica
Lsat_1_v5_gn_1_43821 Lactuca sativa
Lsat_1_v5_gn_2_25721 Lactuca sativa
Manes.03G012200 Manihot esculenta
Mapoly0033s0067 Marchantia polymorpha
MCO12G231 Micromonas commoda
MD15G1130500 Malus domestica
Medtr3g106410 Medicago truncatula
MELO3C016990.2 Cucumis melo
MELO3C031894.2 Cucumis melo
MELO3C032098.2 Cucumis melo
Migut.A00009 Erythranthe guttata
MSTRG.11596 Avicennia marina
Nitab4.5_0002992g0040 Nicotiana tabacum
Nitab4.5_0005958g0020 Nicotiana tabacum
Nn8g39704 Nelumbo nucifera
Oeu033353.1 Olea europaea
Os02g0798700 Oryza sativa ssp. japonica
Peaxi162Scf00116g00091 Petunia axillaris
Peaxi162Scf00116g00915 Petunia axillaris
PGR142G3966 Punica granatum
PGSC0003DMG400015627 Solanum tuberosum
Phvul.007G279700 Phaseolus vulgaris
Potri.018G022800 Populus trichocarpa
Pp3c12_9830 Physcomitrium patens
Pp3c4_13414 Physcomitrium patens
Pp3c4_13420 Physcomitrium patens
Prupe.1G485900 Prunus persica
Psat5g030800 Pisum sativum
PSO063G6514 Papaver somniferum
QL02p020429 Quercus lobata
RcHm_v2.0_Chr2g0139901 Rosa chinensis
RcHm_v2.0_Chr6g0297241 Rosa chinensis
Rhsim01G0220500 Rhododendron simsii
Rhsim02G0205700 Rhododendron simsii
Sabra18G0025200 Salix brachista
Sc20g0001320 Simmondsia chinensis
Sed0024238 Sechium edule
SEGI_00815 Sequoiadendron giganteum
SEGI_08303 Sequoiadendron giganteum
SEGI_21256 Sequoiadendron giganteum
SEGI_39231 Sequoiadendron giganteum
SEGI_40333 Sequoiadendron giganteum
SGA_v2.0_scaffold64G21986 Striga asiatica
SHI18506 Sapria himalayana
SHI18507 Sapria himalayana
SMO134G0198 Selaginella moellendorffii
Solyc08g041780.3 Solanum lycopersicum
Sopen08g011940 Solanum pennellii
Sp7g29850 Schrenkiella parvula
TAR625G1411 Trochodendron aralioides
THA.LOC104805576 Tarenaya hassleriana
Thecc.09G019800 Theobroma cacao
Thhalv10024640m.g Eutrema salsugineum
TPR.G18367 Trifolium pratense
TPR.G21273 Trifolium pratense
TPR.G21279 Trifolium pratense
TPR.G3127 Trifolium pratense
TWI32G0623 Tripterygium wilfordii
TWI34G1186 Tripterygium wilfordii
TWI63G1552 Tripterygium wilfordii
unitig_0.g2772 Utricularia gibba
unitig_60.g25872 Utricularia gibba
unitig_748.g7861 Utricularia gibba
vmacro11210 Vaccinium macrocarpon
vmacro11211 Vaccinium macrocarpon
VMungo0720G0351 Vigna mungo
Zm00001eb257970 Zea mays

User provided reference genes

Program Settings