Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16880 Brassica napus
A04p22970 Brassica napus
A05p15240 Brassica napus
Aa31LG5G6500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis
Actinidia02620 Actinidia chinensis
Actinidia23202 Actinidia chinensis
Actinidia32613 Actinidia chinensis
Ah.15g096090 Amaranthus hybridus
AL4G25030 Arabidopsis lyrata
Aqoxy2G00789 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea
AT2G30200 Arabidopsis thaliana
ATR0037G072 Amborella trichopoda
ATR0594G208 Amborella trichopoda
Atru.chr3.4126 Acer truncatum
AUR62001878 Chenopodium quinoa
AUR62009675 Chenopodium quinoa
BcaB01g04122 Brassica carinata
BcaB02g10307 Brassica carinata
BcaB06g28350 Brassica carinata
BcaC01g06023 Brassica carinata
BcaC02g08041 Brassica carinata
BcaC02g11103 Brassica carinata
BolC3t14364H Brassica oleracea
BolC4t23568H Brassica oleracea
BolC4t27422H Brassica oleracea
BraA03t10976Z Brassica rapa
BraA04t17832Z Brassica rapa
BraA05t20443Z Brassica rapa
C03p19860 Brassica napus
C04p20390 Brassica napus
C04p59110 Brassica napus
CAN.G911.42 Capsicum annuum
CANSAT54G2578 Cannabis sativa
CARHR123500 Cardamine hirsuta
Carub.0004s1135 Capsella rubella
Carub.0004s1136 Capsella rubella
Ca_15002_v3 Cicer arietinum L.
CBR_g33923 Chara braunii
Cc01_g14810 Coffea canephora
CDE06G2756 Ceratophyllum demersum
Cfa011772 Carpinus fangiana
Ciclev10028558m.g Citrus clementina
CiPaw.13G069800 Carya illinoinensis
CiPaw.14G054500 Carya illinoinensis
ClCG03G000380 Citrullus lanatus
COL.COLO4_11143 Corchorus olitorius
COL.COLO4_24546 Corchorus olitorius
COL.COLO4_37924 Corchorus olitorius
Cpa.g.sc2.364 Carica papaya
Cre02.g088250 Chlamydomonas reinhardtii
Cre14.g621650 Chlamydomonas reinhardtii
CsaV3_1G036540 Cucumis sativus L.
CSS0045632 Camellia sinensis var. sinensis
DCAR_018228 Daucus carota
Dinv28694 Davidia involucrata
Duzib168G1324 Durio zibethinus
ECA248G3413 Erigeron canadensis
EL10Ac7g15913 Beta vulgaris
Eucgr.J01859 Eucalyptus grandis
FAN11G1726 Fragaria x ananassa
FAN16G0900 Fragaria x ananassa
FAN21G3316 Fragaria x ananassa
FAN21G3649 Fragaria x ananassa
FAN25G0671 Fragaria x ananassa
FvH4_3g39690 Fragaria vesca
Glyma.11G164500 Glycine max
Glyma.18G057700 Glycine max
Gohir.A03G025700 Gossypium hirsutum
Gohir.D03G142800 Gossypium hirsutum
Gorai.003G150000 Gossypium raimondii
GSVIVG01024638001 Vitis vinifera
GSVIVG01024639001 Vitis vinifera
HanXRQChr01g0012131 Helianthus annuus
HanXRQChr01g0012161 Helianthus annuus
Haze_24407 Corylus avellana
HPP92_012003 Vanilla planifolia
HPP92_013770 Vanilla planifolia
HPP92_013838 Vanilla planifolia
Hund29009 Selenicereus undatus
Hund29013 Selenicereus undatus
Lalb_Chr15g0083211 Lupinus albus
Lalb_Chr18g0051371 Lupinus albus
Lj2A1092T52 Lonicera japonica
Lj6g0008641 Lotus japonicus
Lsat_1_v5_gn_5_174621 Lactuca sativa
Manes.18G127700 Manihot esculenta
Mapoly0009s0078 Marchantia polymorpha
MBI05_g35601_MAGBIO Magnolia biondii
MBI10_g37352_MAGBIO Magnolia biondii
MCO01G413 Micromonas commoda
MCO04G051 Micromonas commoda
MD03G1055800 Malus domestica
MD11G1056800 Malus domestica
Medtr3g031380 Medicago truncatula
MELO3C020514.2 Cucumis melo
Migut.N00764 Erythranthe guttata
MSTRG.17889 Avicennia marina
Nitab4.5_0000644g0100 Nicotiana tabacum
Nitab4.5_0000644g0120 Nicotiana tabacum
Nitab4.5_0001121g0110 Nicotiana tabacum
Nitab4.5_0002737g0070 Nicotiana tabacum
Nitab4.5_0006126g0030 Nicotiana tabacum
Nitab4.5_0006359g0020 Nicotiana tabacum
Nn2g10995 Nelumbo nucifera
Nn2g13251 Nelumbo nucifera
Nn2g15913 Nelumbo nucifera
Oeu025052.1 Olea europaea
Os03g0297400 Oryza sativa ssp. japonica
Peaxi162Scf00055g00057 Petunia axillaris
PGR102G2346 Punica granatum
PGSC0003DMG400021362 Solanum tuberosum
Phvul.006G073300 Phaseolus vulgaris
Potri.001G282600 Populus trichocarpa
Potri.009G077800 Populus trichocarpa
Pp3c20_19160 Physcomitrium patens
PRCOL_00000466 Prasinoderma coloniale
PRCOL_00005899 Prasinoderma coloniale
Prupe.6G048900 Prunus persica
Psat5g153440 Pisum sativum
PSO339G6109 Papaver somniferum
PSO801G0690 Papaver somniferum
QL01p026440 Quercus lobata
RcHm_v2.0_Chr5g0071571 Rosa chinensis
Rhsim13G0064700 Rhododendron simsii
Sabra09G0059400 Salix brachista
SalBow2G1640 Salvia bowleyana
Sc12g0002010 Simmondsia chinensis
Sed0001589 Sechium edule
Sed0003355 Sechium edule
SEGI_23058 Sequoiadendron giganteum
SGA_v2.0_scaffold146G36123 Striga asiatica
SHI19203 Sapria himalayana
SMO200G0259 Selaginella moellendorffii
Solyc01g006980.4 Solanum lycopersicum
Sopen01g002970 Solanum pennellii
Sp4g12790 Schrenkiella parvula
TAR623G0659 Trochodendron aralioides
TAR633G1387 Trochodendron aralioides
THA.LOC104800771 Tarenaya hassleriana
THA.LOC104826277 Tarenaya hassleriana
Thecc.09G357100 Theobroma cacao
Thhalv10016751m.g Eutrema salsugineum
TPR.G35611 Trifolium pratense
TWI75G0989 Tripterygium wilfordii
unitig_60.g25555 Utricularia gibba
vmacro02923 Vaccinium macrocarpon
VMungo0540G0639 Vigna mungo
Zm00001eb013760 Zea mays
Zm00001eb396720 Zea mays

User provided reference genes

Program Settings