Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23600 Brassica napus
A07p26650 Brassica napus
A07p45280 Brassica napus
Aa31LG4G650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis
Actinidia08828 Actinidia chinensis
Ah.01g021090 Amaranthus hybridus
Ah.03g146350 Amaranthus hybridus
Ah.09g223940 Amaranthus hybridus
Ah.15g096420 Amaranthus hybridus
AL2G41120 Arabidopsis lyrata
Aqoxy7G03780 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.529T30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea
AT1G80380 Arabidopsis thaliana
ATR0083G024 Amborella trichopoda
AUR62011604 Chenopodium quinoa
AUR62016418 Chenopodium quinoa
BcaB02g07276 Brassica carinata
BcaB02g08689 Brassica carinata
BcaB05g25272 Brassica carinata
BcaC03g15976 Brassica carinata
BcaC08g45309 Brassica carinata
BcaC08g47585 Brassica carinata
BolC2t09746H Brassica oleracea
BolC6t38077H Brassica oleracea
BolC6t40426H Brassica oleracea
BraA02t07352Z Brassica rapa
BraA07t30308Z Brassica rapa
BraA07t32032Z Brassica rapa
C02p37360 Brassica napus
C06p29130 Brassica napus
C06p54140 Brassica napus
CAN.G438.45 Capsicum annuum
CANSAT56G4214 Cannabis sativa
CARHR074130 Cardamine hirsuta
Carub.0002s2719 Capsella rubella
Ca_01103_v3 Cicer arietinum L.
CBR_g49861 Chara braunii
Cc04_g03640 Coffea canephora
CDE06G1313 Ceratophyllum demersum
Cfa002046 Carpinus fangiana
Ciclev10025569m.g Citrus clementina
CiPaw.02G152800 Carya illinoinensis
ClCG09G002360 Citrullus lanatus
ClCG09G002370 Citrullus lanatus
COL.COLO4_02957 Corchorus olitorius
Cpa.g.sc10.174 Carica papaya
Cre12.g542300 Chlamydomonas reinhardtii
CsaV3_7G032950 Cucumis sativus L.
CSS0005409 Camellia sinensis var. sinensis
CSS0037007 Camellia sinensis var. sinensis
DCAR_026302 Daucus carota
Dinv30535 Davidia involucrata
Dinv38065 Davidia involucrata
Dinv38066 Davidia involucrata
Duzib192G0909 Durio zibethinus
Duzib235G1168 Durio zibethinus
ECA247G3808 Erigeron canadensis
EL10Ac9g21974 Beta vulgaris
Eucgr.F02574 Eucalyptus grandis
FAN02G1331 Fragaria x ananassa
FAN05G5687 Fragaria x ananassa
FAN09G3531 Fragaria x ananassa
FAN14G4632 Fragaria x ananassa
FvH4_6g30840 Fragaria vesca
Glyma.13G361400 Glycine max
Glyma.15G012500 Glycine max
Glyma.15G221066 Glycine max
Gohir.A02G122900 Gossypium hirsutum
Gohir.A05G127000 Gossypium hirsutum
Gohir.D03G073500 Gossypium hirsutum
Gohir.D05G127900 Gossypium hirsutum
Gorai.002G058000 Gossypium raimondii
Gorai.009G132100 Gossypium raimondii
GSVIVG01017163001 Vitis vinifera
HanXRQChr02g0032631 Helianthus annuus
HanXRQChr04g0096441 Helianthus annuus
Haze_16464 Corylus avellana
HPP92_011481 Vanilla planifolia
HPP92_011544 Vanilla planifolia
Hund00584 Selenicereus undatus
Hund06597 Selenicereus undatus
Lalb_Chr14g0373571 Lupinus albus
Lalb_Chr22g0351141 Lupinus albus
Lj3g0001201 Lotus japonicus
Lj3g0008822 Lotus japonicus
Lj9A505T66 Lonicera japonica
Lsat_1_v5_gn_1_34140 Lactuca sativa
Manes.04G120700 Manihot esculenta
Mapoly0010s0209 Marchantia polymorpha
MBI01_g13569_MAGBIO Magnolia biondii
MCO11G539 Micromonas commoda
MD17G1198400 Malus domestica
Medtr2g102510 Medicago truncatula
MELO3C023371.2 Cucumis melo
Migut.I00837 Erythranthe guttata
MSTRG.11096 Avicennia marina
Nitab4.5_0002424g0040 Nicotiana tabacum
Nitab4.5_0005784g0040 Nicotiana tabacum
Nn1g05393 Nelumbo nucifera
Nn2g11397 Nelumbo nucifera
Nn2g11846 Nelumbo nucifera
Nn3g18662 Nelumbo nucifera
Nn4g26563 Nelumbo nucifera
Nn8g39296 Nelumbo nucifera
Oeu022417.1 Olea europaea
Oeu033460.1 Olea europaea
Os01g0682500 Oryza sativa ssp. japonica
Peaxi162Scf00015g00234 Petunia axillaris
PGR102G2550 Punica granatum
PGSC0003DMG400002559 Solanum tuberosum
Phvul.005G173200 Phaseolus vulgaris
Potri.001G177300 Populus trichocarpa
Potri.003G058500 Populus trichocarpa
Pp3c18_16070 Physcomitrium patens
Pp3c21_6430 Physcomitrium patens
PRCOL_00005044 Prasinoderma coloniale
Prupe.3G075100 Prunus persica
Psat5g299520 Pisum sativum
PSO210G3793 Papaver somniferum
PSO210G6241 Papaver somniferum
QL05p025470 Quercus lobata
RcHm_v2.0_Chr2g0137281 Rosa chinensis
Rhsim12G0195800 Rhododendron simsii
Sabra01G0149000 Salix brachista
Sabra03G0032700 Salix brachista
Sc12g0009100 Simmondsia chinensis
Sed0002572 Sechium edule
SEGI_20298 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14802 Striga asiatica
SHI09688 Sapria himalayana
SMO147G0425 Selaginella moellendorffii
Solyc03g120430.3 Solanum lycopersicum
Sopen00g008920 Solanum pennellii
Sopen03g039310 Solanum pennellii
Sp5g35430 Schrenkiella parvula
TAR383G0518 Trochodendron aralioides
TAR636G0147 Trochodendron aralioides
TAR636G3653 Trochodendron aralioides
THA.LOC104808210 Tarenaya hassleriana
THA.LOC104812476 Tarenaya hassleriana
Thecc.06G081700 Theobroma cacao
Thhalv10018540m.g Eutrema salsugineum
TPR.G37250 Trifolium pratense
TWI12G0818 Tripterygium wilfordii
unitig_21.g20511 Utricularia gibba
vmacro16939 Vaccinium macrocarpon
VMungo1080G0347 Vigna mungo
Zm00001eb156570 Zea mays
Zm00001eb267390 Zea mays

User provided reference genes

Program Settings