Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18530 Brassica napus
A05p12730 Brassica napus
Aa31LG5G4570 Aethionema arabicum
Actinidia09755 Actinidia chinensis
Ah.01g001840 Amaranthus hybridus
AL4G28410 Arabidopsis lyrata
Aqoxy2G03788 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L0FFGY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LYY30L Arachis hypogaea
AT2G32900 Arabidopsis thaliana
ATR1128G058 Amborella trichopoda
Atru.chr12.2374 Acer truncatum
Atru.chr6.3273 Acer truncatum
Atru.chr6.3288 Acer truncatum
AUR62015114 Chenopodium quinoa
AUR62017577 Chenopodium quinoa
BcaB01g03944 Brassica carinata
BcaB02g10504 Brassica carinata
BcaC01g05869 Brassica carinata
BolC3t14542H Brassica oleracea
BolC4t23215H Brassica oleracea
BraA03t11112Z Brassica rapa
BraA05t20212Z Brassica rapa
C03p21580 Brassica napus
C04p16650 Brassica napus
CAN.G387.3 Capsicum annuum
CANSAT64G0097 Cannabis sativa
CARHR126840 Cardamine hirsuta
Carub.0004s1431 Capsella rubella
Ca_06064_v3 Cicer arietinum L.
Ca_06065_v3 Cicer arietinum L.
Ca_06067_v3 Cicer arietinum L.
Ca_31316_v3 Cicer arietinum L.
CBR_g30206 Chara braunii
CBR_g3446 Chara braunii
CBR_g3450 Chara braunii
Cc00_g21460 Coffea canephora
CDE07G0136 Ceratophyllum demersum
Cfa014305 Carpinus fangiana
Cfa026774 Carpinus fangiana
Ciclev10014379m.g Citrus clementina
CiPaw.04G108800 Carya illinoinensis
ClCG02G018160 Citrullus lanatus
COL.COLO4_07254 Corchorus olitorius
Cpa.g.sc132.37 Carica papaya
CsaV3_6G015550 Cucumis sativus L.
CSS0018671 Camellia sinensis var. sinensis
DCAR_012916 Daucus carota
Dinv08709 Davidia involucrata
Dinv39761 Davidia involucrata
Duzib138G1622 Durio zibethinus
Duzib211G0196 Durio zibethinus
ECA236G2537 Erigeron canadensis
EL10Ac9g22816 Beta vulgaris
Eucgr.A01088 Eucalyptus grandis
FAN02G4553 Fragaria x ananassa
FAN05G4875 Fragaria x ananassa
FAN09G1456 Fragaria x ananassa
FAN14G4409 Fragaria x ananassa
FvH4_3g20454 Fragaria vesca
FvH4_6g41900 Fragaria vesca
Glyma.02G266800 Glycine max
Glyma.14G050700 Glycine max
Glyma.20G074700 Glycine max
Gohir.A07G168100 Gossypium hirsutum
Gohir.D07G174400 Gossypium hirsutum
Gorai.001G195000 Gossypium raimondii
GSVIVG01030526001 Vitis vinifera
HanXRQChr14g0438421 Helianthus annuus
HanXRQChr16g0508221 Helianthus annuus
Haze_12752 Corylus avellana
Hma1.2p1_0445F.1_g154190 Hydrangea macrophylla
Hma1.2p1_2840F.1_g329320 Hydrangea macrophylla
Hma1.2p1_2840F.1_g329330 Hydrangea macrophylla
HPP92_000155 Vanilla planifolia
HPP92_000196 Vanilla planifolia
HPP92_000240 Vanilla planifolia
HPP92_028623 Vanilla planifolia
HPP92_028624 Vanilla planifolia
HPP92_028625 Vanilla planifolia
HPP92_028626 Vanilla planifolia
Hund08442 Selenicereus undatus
Lalb_Chr10g0105531 Lupinus albus
Lj8A131T30 Lonicera japonica
LjContig00029g0002265 Lotus japonicus
Lsat_1_v5_gn_7_94920 Lactuca sativa
Manes.12G058300 Manihot esculenta
Mapoly0004s0108 Marchantia polymorpha
MBI16_g26176_MAGBIO Magnolia biondii
MCO12G150 Micromonas commoda
MD09G1116200 Malus domestica
MD17G1107900 Malus domestica
Medtr5g084823 Medicago truncatula
Medtr5g084830 Medicago truncatula
MELO3C019721.2 Cucumis melo
Migut.A01159 Erythranthe guttata
Nitab4.5_0000006g0360 Nicotiana tabacum
Nitab4.5_0009060g0010 Nicotiana tabacum
Nn1g07321 Nelumbo nucifera
Nn5g29172 Nelumbo nucifera
Oeu054514.1 Olea europaea
Os11g0545700 Oryza sativa ssp. japonica
Peaxi162Scf00977g00312 Petunia axillaris
Peaxi162Scf00977g00315 Petunia axillaris
PGR042G3679 Punica granatum
PGSC0003DMG400019206 Solanum tuberosum
Phvul.008G215200 Phaseolus vulgaris
Potri.002G223600 Populus trichocarpa
Pp3c3_5560 Physcomitrium patens
PRCOL_00004220 Prasinoderma coloniale
Prupe.3G208500 Prunus persica
Psat0s1468g0040 Pisum sativum
Psat0s1468g0080 Pisum sativum
Psat1g135920 Pisum sativum
Psat2g026760 Pisum sativum
Psat5g176200 Pisum sativum
PSO017G2150 Papaver somniferum
PSO675G0915 Papaver somniferum
QL01p037797 Quercus lobata
RcHm_v2.0_Chr0c20g0500271 Rosa chinensis
RcHm_v2.0_Chr1g0340121 Rosa chinensis
RcHm_v2.0_Chr1g0340131 Rosa chinensis
RcHm_v2.0_Chr1g0340141 Rosa chinensis
RcHm_v2.0_Chr2g0157781 Rosa chinensis
Rhsim06G0169400 Rhododendron simsii
Sabra02G0171200 Salix brachista
SalBow7G0507 Salvia bowleyana
Sc21g0001080 Simmondsia chinensis
Sed0026816 Sechium edule
SEGI_13952 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24401 Striga asiatica
SHI10093 Sapria himalayana
SHI10094 Sapria himalayana
SHI10095 Sapria himalayana
SMO200G0072 Selaginella moellendorffii
SMO200G0254 Selaginella moellendorffii
SMO278G0012 Selaginella moellendorffii
Solyc05g043350.4 Solanum lycopersicum
Sopen05g026560 Solanum pennellii
Sp4g15270 Schrenkiella parvula
TAR629G0221 Trochodendron aralioides
THA.LOC104826129 Tarenaya hassleriana
Thecc.01G184100 Theobroma cacao
Thhalv10016293m.g Eutrema salsugineum
TPR.G146 Trifolium pratense
TPR.G25656 Trifolium pratense
TPR.G3898 Trifolium pratense
TPR.G6822 Trifolium pratense
TWI75G1245 Tripterygium wilfordii
unitig_8.g4607 Utricularia gibba
unitig_8.g4608 Utricularia gibba
vmacro12148 Vaccinium macrocarpon
VMungo0647G1710 Vigna mungo
Zm00001eb113720 Zea mays
Zm00001eb114880 Zea mays

User provided reference genes

Program Settings