Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p29530 Brassica napus
A05p29540 Brassica napus
A05p29560 Brassica napus
A05p29760 Brassica napus
A05p29770 Brassica napus
A08p22270 Brassica napus
Aa31LG3G3760 Aethionema arabicum
Aa31LG3G3770 Aethionema arabicum
Aa31LG3G3780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.917 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.918 Anthoceros agrestis
Actinidia12125 Actinidia chinensis
Actinidia36563 Actinidia chinensis
Ah.03g140900 Amaranthus hybridus
AL2G11330 Arabidopsis lyrata
Aqoxy6G01122 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1JA7FP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6U5FTL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3TR42 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VB3WEH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VLQ9MW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZ5KK1 Arachis hypogaea
AT1G63810 Arabidopsis thaliana
ATR0665G204 Amborella trichopoda
Atru.chr3.583 Acer truncatum
AUR62004057 Chenopodium quinoa
AUR62007571 Chenopodium quinoa
BcaC01g00457 Brassica carinata
BcaNung05455 Brassica carinata
BolC3t20259H Brassica oleracea
BraA08t34186Z Brassica rapa
C03p80050 Brassica napus
C05p48270 Brassica napus
C07p61790 Brassica napus
C07p61800 Brassica napus
CAN.G3433.1 Capsicum annuum
CAN.G358.87 Capsicum annuum
CAN.G358.90 Capsicum annuum
CAN.G358.91 Capsicum annuum
CANSAT78G0304 Cannabis sativa
CARHR047390 Cardamine hirsuta
Carub.0002s0104 Capsella rubella
Ca_24844_v3 Cicer arietinum L.
Ca_24849_v3 Cicer arietinum L.
CBR_g37736 Chara braunii
Cc03_g11510 Coffea canephora
Cc03_g11520 Coffea canephora
CDE02G4373 Ceratophyllum demersum
Cfa004311 Carpinus fangiana
Cfa025732 Carpinus fangiana
Ciclev10024776m.g Citrus clementina
CiPaw.02G018200 Carya illinoinensis
ClCG06G002580 Citrullus lanatus
COL.COLO4_08906 Corchorus olitorius
Cpa.g.sc6.117 Carica papaya
Cre07.g332800 Chlamydomonas reinhardtii
CsaV3_5G036970 Cucumis sativus L.
CsaV3_6G008550 Cucumis sativus L.
CSS0026274 Camellia sinensis var. sinensis
DCAR_017293 Daucus carota
Dinv39990 Davidia involucrata
Duzib187G1802 Durio zibethinus
ECA232G2226 Erigeron canadensis
EL10Ac6g15557 Beta vulgaris
Eucgr.I02440 Eucalyptus grandis
FAN19G0915 Fragaria x ananassa
FAN23G1660 Fragaria x ananassa
FAN28G2014 Fragaria x ananassa
FvH4_1g13250 Fragaria vesca
Glyma.01G176400 Glycine max
Glyma.11G068600 Glycine max
Gohir.A11G184100 Gossypium hirsutum
Gohir.D11G190600 Gossypium hirsutum
Gorai.007G203100 Gossypium raimondii
GSVIVG01018952001 Vitis vinifera
GSVIVG01024291001 Vitis vinifera
HanXRQChr09g0261511 Helianthus annuus
Haze_15083 Corylus avellana
Haze_15084 Corylus avellana
Hma1.2p1_0400F.1_g144360 Hydrangea macrophylla
Hma1.2p1_0789F.1_g218380 Hydrangea macrophylla
Hma1.2p1_0789F.1_g218390 Hydrangea macrophylla
HPP92_009474 Vanilla planifolia
HPP92_009475 Vanilla planifolia
Hund16432 Selenicereus undatus
Lalb_Chr16g0377811 Lupinus albus
Lj1g0005862 Lotus japonicus
Lj1g0009863 Lotus japonicus
Lj4A201T52 Lonicera japonica
Lsat_1_v5_gn_4_152020 Lactuca sativa
Manes.02G094400 Manihot esculenta
Mapoly0060s0020 Marchantia polymorpha
MBI14_g08060_MAGBIO Magnolia biondii
MCO15G114 Micromonas commoda
MD02G1146900 Malus domestica
MD15G1261100 Malus domestica
Medtr1g110810 Medicago truncatula
Medtr5g020190 Medicago truncatula
MELO3C022270.2 Cucumis melo
Migut.H00986 Erythranthe guttata
MSTRG.23523 Avicennia marina
Nitab4.5_0000178g0060 Nicotiana tabacum
Nitab4.5_0001385g0060 Nicotiana tabacum
Nn5g29624 Nelumbo nucifera
Oeu017201.1 Olea europaea
Os12g0166500 Oryza sativa ssp. japonica
Peaxi162Scf00366g00125 Petunia axillaris
PGR119G1063 Punica granatum
Phvul.002G030700 Phaseolus vulgaris
Phvul.011G118815 Phaseolus vulgaris
Phvul.011G118830 Phaseolus vulgaris
Potri.007G024600 Populus trichocarpa
Pp3c6_25920 Physcomitrium patens
PRCOL_00003562 Prasinoderma coloniale
Prupe.7G155300 Prunus persica
Psat2g159520 Pisum sativum
Psat4g132320 Pisum sativum
PSO541G3573 Papaver somniferum
PSO675G5282 Papaver somniferum
QL02p065465 Quercus lobata
QL02p065474 Quercus lobata
QL04p047829 Quercus lobata
QL06p046224 Quercus lobata
QL06p046231 Quercus lobata
QL06p046242 Quercus lobata
RcHm_v2.0_Chr2g0101431 Rosa chinensis
RcHm_v2.0_Chr2g0101471 Rosa chinensis
RcHm_v2.0_Chr5g0064711 Rosa chinensis
Rhsim02G0060300 Rhododendron simsii
Sabra07G0021700 Salix brachista
SalBow2G0826 Salvia bowleyana
Sc03g0003000 Simmondsia chinensis
Sed0013525 Sechium edule
SEGI_33720 Sequoiadendron giganteum
SEGI_35015 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19532 Striga asiatica
SHI09115 Sapria himalayana
SMO347G0575 Selaginella moellendorffii
Solyc02g085230.3 Solanum lycopersicum
Sopen02g029930 Solanum pennellii
Sp7g34280 Schrenkiella parvula
TAR625G0290 Trochodendron aralioides
THA.LOC104809497 Tarenaya hassleriana
Thecc.01G034700 Theobroma cacao
Thhalv10021392m.g Eutrema salsugineum
Thhalv10024292m.g Eutrema salsugineum
TPR.G22288 Trifolium pratense
TPR.G23227 Trifolium pratense
TPR.G36480 Trifolium pratense
TPR.G8389 Trifolium pratense
TWI77G0475 Tripterygium wilfordii
unitig_21.g20953 Utricularia gibba
vmacro15553 Vaccinium macrocarpon
VMungo1215G0507 Vigna mungo
Zm00001eb139270 Zea mays

User provided reference genes

Program Settings