Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p12930 Brassica napus
A09p39880 Brassica napus
Aa31LG7G8630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2858 Anthoceros agrestis
Actinidia28645 Actinidia chinensis
Actinidia32300 Actinidia chinensis
Actinidia32301 Actinidia chinensis
Actinidia32302 Actinidia chinensis
Ah.02g126900 Amaranthus hybridus
Ah.02g126910 Amaranthus hybridus
AL1G39280 Arabidopsis lyrata
Aqoxy3G03611 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06XI8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CTA0UQ Arachis hypogaea
AT1G26460 Arabidopsis thaliana
ATR0064G103 Amborella trichopoda
Atru.chr11.1649 Acer truncatum
AUR62003111 Chenopodium quinoa
AUR62007926 Chenopodium quinoa
BcaC06g35143 Brassica carinata
BolC5t31188H Brassica oleracea
BolC7t42456H Brassica oleracea
BraA07t29066Z Brassica rapa
BraA09t39487Z Brassica rapa
C05p24540 Brassica napus
C07p19370 Brassica napus
CAN.G616.33 Capsicum annuum
CANSAT64G0483 Cannabis sativa
CARHR025500 Cardamine hirsuta
Carub.0001s2456 Capsella rubella
Ca_04959_v3 Cicer arietinum L.
CBR_g55790 Chara braunii
Cc11_g12080 Coffea canephora
CDE04G2698 Ceratophyllum demersum
CDE07G0543 Ceratophyllum demersum
CDE07G1937 Ceratophyllum demersum
Cfa008886 Carpinus fangiana
Cfa027095 Carpinus fangiana
Ciclev10031249m.g Citrus clementina
CiPaw.05G125900 Carya illinoinensis
CiPaw.06G092100 Carya illinoinensis
ClCG08G010390 Citrullus lanatus
COL.COLO4_27896 Corchorus olitorius
Cpa.g.sc1.117 Carica papaya
CsaV3_6G033660 Cucumis sativus L.
CSS0003173 Camellia sinensis var. sinensis
CSS0008548 Camellia sinensis var. sinensis
CSS0020440 Camellia sinensis var. sinensis
CSS0025326 Camellia sinensis var. sinensis
CSS0030883 Camellia sinensis var. sinensis
CSS0031560 Camellia sinensis var. sinensis
CSS0034194 Camellia sinensis var. sinensis
CSS0037716 Camellia sinensis var. sinensis
CSS0040633 Camellia sinensis var. sinensis
CSS0043256 Camellia sinensis var. sinensis
DCAR_027465 Daucus carota
DCAR_027469 Daucus carota
DCAR_027471 Daucus carota
Dinv15029 Davidia involucrata
Dinv34076 Davidia involucrata
ECA233G5398 Erigeron canadensis
EL10Ac5g12464 Beta vulgaris
EL10Ac6g14982 Beta vulgaris
Eucgr.B03160 Eucalyptus grandis
FAN07G2095 Fragaria x ananassa
FAN12G2645 Fragaria x ananassa
FAN17G2607 Fragaria x ananassa
FAN22G1297 Fragaria x ananassa
FvH4_4g30160 Fragaria vesca
Glyma.01G058200 Glycine max
Glyma.02G116000 Glycine max
Gohir.A03G104200 Gossypium hirsutum
Gohir.D02G129300 Gossypium hirsutum
Gohir.D12G165033 Gossypium hirsutum
Gohir.D12G165066 Gossypium hirsutum
Gorai.005G145100 Gossypium raimondii
GSVIVG01009940001 Vitis vinifera
GSVIVG01012211001 Vitis vinifera
GSVIVG01021735001 Vitis vinifera
GSVIVG01028487001 Vitis vinifera
HanXRQChr08g0211831 Helianthus annuus
Haze_11916 Corylus avellana
Hma1.2p1_0354F.1_g133420 Hydrangea macrophylla
Hma1.2p1_0477F.1_g160970 Hydrangea macrophylla
Hma1.2p1_0820F.1_g223970 Hydrangea macrophylla
Hma1.2p1_1953F.1_g308830 Hydrangea macrophylla
HPP92_009526 Vanilla planifolia
HPP92_009555 Vanilla planifolia
Hund25184 Selenicereus undatus
Lalb_Chr10g0098781 Lupinus albus
Lj2g0005374 Lotus japonicus
Lj6A780T47 Lonicera japonica
Lsat_1_v5_gn_8_47681 Lactuca sativa
Manes.01G028400 Manihot esculenta
Mapoly0002s0313 Marchantia polymorpha
MBI16_g13587_MAGBIO Magnolia biondii
MD13G1063400 Malus domestica
MD16G1061800 Malus domestica
Medtr1g009040 Medicago truncatula
Medtr5g044270 Medicago truncatula
Medtr6g024415 Medicago truncatula
MELO3C011422.2 Cucumis melo
Migut.E00049 Erythranthe guttata
Migut.L01196 Erythranthe guttata
MSTRG.13448 Avicennia marina
Nitab4.5_0000231g0420 Nicotiana tabacum
Nitab4.5_0004171g0040 Nicotiana tabacum
Nitab4.5_0011966g0020 Nicotiana tabacum
Nn3g17424 Nelumbo nucifera
Nn4g23396 Nelumbo nucifera
Oeu048146.1 Olea europaea
Os07g0599000 Oryza sativa ssp. japonica
Peaxi162Scf00175g00020 Petunia axillaris
PGR102G0250 Punica granatum
PGSC0003DMG400028320 Solanum tuberosum
Phvul.003G043100 Phaseolus vulgaris
Potri.010G159100 Populus trichocarpa
Pp3c14_20030 Physcomitrium patens
Pp3c1_28760 Physcomitrium patens
Prupe.1G286100 Prunus persica
Psat2g129640 Pisum sativum
PSO017G2003 Papaver somniferum
PSO478G4140 Papaver somniferum
QL03p072083 Quercus lobata
QL03p072107 Quercus lobata
QL03p072513 Quercus lobata
RcHm_v2.0_Chr4g0438491 Rosa chinensis
Rhsim12G0135900 Rhododendron simsii
Sabra10G0120800 Salix brachista
SalBow2G3108 Salvia bowleyana
SalBow8G1172 Salvia bowleyana
Sc04g0007630 Simmondsia chinensis
Sed0014019 Sechium edule
SEGI_02789 Sequoiadendron giganteum
SEGI_03319 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07777 Striga asiatica
SGA_v2.0_scaffold287G47167 Striga asiatica
SHI32782 Sapria himalayana
SHI32882 Sapria himalayana
SHI32884 Sapria himalayana
Solyc05g012390.4 Solanum lycopersicum
Sopen05g007210 Solanum pennellii
TAR374G1337 Trochodendron aralioides
TAR622G0524 Trochodendron aralioides
THA.LOC104805036 Tarenaya hassleriana
THA.LOC104822013 Tarenaya hassleriana
Thecc.02G332500 Theobroma cacao
Thhalv10007071m.g Eutrema salsugineum
TPR.G24471 Trifolium pratense
TWI31G1115 Tripterygium wilfordii
TWI79G1393 Tripterygium wilfordii
vmacro16381 Vaccinium macrocarpon
VMungo1215G0095 Vigna mungo
Zm00001eb108470 Zea mays
Zm00001eb326730 Zea mays

User provided reference genes

Program Settings