Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32680 Brassica napus
A05p44800 Brassica napus
Aa31LG5G12460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2820 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis
Actinidia28727 Actinidia chinensis
Actinidia35669 Actinidia chinensis
Ah.01g003790 Amaranthus hybridus
AL3G11100 Arabidopsis lyrata
Aqoxy6G02087 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea
AT3G01160 Arabidopsis thaliana
ATR0665G361 Amborella trichopoda
Atru.chr3.886 Acer truncatum
Atru.chr3.897 Acer truncatum
AUR62003701 Chenopodium quinoa
AUR62018009 Chenopodium quinoa
BcaC01g04463 Brassica carinata
BcaC01g04464 Brassica carinata
BcaC01g04505 Brassica carinata
BcaC01g04506 Brassica carinata
BcaC05g30387 Brassica carinata
BcaC05g30489 Brassica carinata
BolC3t16251H Brassica oleracea
BolC3t16252H Brassica oleracea
BolC3t16253H Brassica oleracea
BolC5t35121H Brassica oleracea
BraA03t12436Z Brassica rapa
BraA05t23177Z Brassica rapa
C03p39780 Brassica napus
C03p39890 Brassica napus
C03p39900 Brassica napus
C09p75390 Brassica napus
CAN.G890.41 Capsicum annuum
CANSAT25G3056 Cannabis sativa
CARHR075890 Cardamine hirsuta
Carub.0003s0100 Capsella rubella
Ca_18264_v3 Cicer arietinum L.
CBR_g41392 Chara braunii
Cc07_g11220 Coffea canephora
CDE05G0343 Ceratophyllum demersum
CDE05G0976 Ceratophyllum demersum
Cfa007019 Carpinus fangiana
Ciclev10025027m.g Citrus clementina
CiPaw.07G062200 Carya illinoinensis
ClCG05G000690 Citrullus lanatus
COL.COLO4_33606 Corchorus olitorius
COL.COLO4_33622 Corchorus olitorius
COL.COLO4_34179 Corchorus olitorius
Cpa.g.sc6.304 Carica papaya
Cre10.g452500 Chlamydomonas reinhardtii
CsaV3_3G007910 Cucumis sativus L.
CSS0012813 Camellia sinensis var. sinensis
CSS0036730 Camellia sinensis var. sinensis
DCAR_024713 Daucus carota
Dinv40130 Davidia involucrata
Dinv40131 Davidia involucrata
Duzib147G1420 Durio zibethinus
ECA232G2222 Erigeron canadensis
EL10Ac6g15170 Beta vulgaris
Eucgr.I02314 Eucalyptus grandis
FAN03G2005 Fragaria x ananassa
FAN19G1371 Fragaria x ananassa
FAN23G0842 Fragaria x ananassa
FAN26G3228 Fragaria x ananassa
FvH4_1g11200 Fragaria vesca
Glyma.02G045200 Glycine max
Glyma.16G122800 Glycine max
Gohir.1Z049326 Gossypium hirsutum
Gohir.1Z049627 Gossypium hirsutum
Gohir.A05G376600 Gossypium hirsutum
Gohir.D04G039432 Gossypium hirsutum
Gorai.012G044400 Gossypium raimondii
GSVIVG01005388001 Vitis vinifera
GSVIVG01005594001 Vitis vinifera
GSVIVG01007226001 Vitis vinifera
HanXRQChr09g0257321 Helianthus annuus
Haze_03712 Corylus avellana
HPP92_019124 Vanilla planifolia
HPP92_019125 Vanilla planifolia
Hund14070 Selenicereus undatus
Lalb_Chr16g0391491 Lupinus albus
Lj4A224T28 Lonicera japonica
Lj4g0028127 Lotus japonicus
Lsat_1_v5_gn_4_144101 Lactuca sativa
Lsat_1_v5_gn_5_164041 Lactuca sativa
Manes.10G142700 Manihot esculenta
Mapoly0061s0018 Marchantia polymorpha
MCO13G085 Micromonas commoda
MD02G1124600 Malus domestica
MD15G1238600 Malus domestica
MD15G1238700 Malus domestica
Medtr3g107330 Medicago truncatula
Medtr3g107350 Medicago truncatula
Medtr4g073330 Medicago truncatula
Medtr4g096820 Medicago truncatula
MELO3C006009.2 Cucumis melo
Migut.F01827 Erythranthe guttata
MSTRG.10980 Avicennia marina
Nitab4.5_0001789g0050 Nicotiana tabacum
Nitab4.5_0006899g0060 Nicotiana tabacum
Nn1g05556 Nelumbo nucifera
Nn5g30820 Nelumbo nucifera
Oeu005338.2 Olea europaea
Oeu046870.1 Olea europaea
Os07g0531700 Oryza sativa ssp. japonica
Peaxi162Scf00198g00136 Petunia axillaris
PGR119G2074 Punica granatum
PGSC0003DMG400003588 Solanum tuberosum
Phvul.003G266400 Phaseolus vulgaris
Potri.005G108800 Populus trichocarpa
Pp3c17_7210 Physcomitrium patens
PRCOL_00004947 Prasinoderma coloniale
Prupe.7G173800 Prunus persica
Psat7g090000 Pisum sativum
PSO541G1155 Papaver somniferum
PSO675G8954 Papaver somniferum
QL06p051414 Quercus lobata
RcHm_v2.0_Chr2g0098611 Rosa chinensis
Rhsim08G0030800 Rhododendron simsii
Rhsim08G0030900 Rhododendron simsii
Sabra05G0089200 Salix brachista
Sc07g0001170 Simmondsia chinensis
Sed0008382 Sechium edule
SEGI_08029 Sequoiadendron giganteum
SEGI_25425 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31425 Striga asiatica
SHI00027 Sapria himalayana
SMO232G0062 Selaginella moellendorffii
SMO239G0207 Selaginella moellendorffii
Solyc02g083470.3 Solanum lycopersicum
Sopen02g028260 Solanum pennellii
Sp3g00960 Schrenkiella parvula
TAR628G0893 Trochodendron aralioides
TAR628G1016 Trochodendron aralioides
TAR628G1348 Trochodendron aralioides
THA.LOC104821168 Tarenaya hassleriana
Thecc.01G154900 Theobroma cacao
Thecc.01G155000 Theobroma cacao
Thecc.08G139800 Theobroma cacao
Thhalv10017085m.g Eutrema salsugineum
Thhalv10020182m.g Eutrema salsugineum
TPR.G21433 Trifolium pratense
TPR.G29970 Trifolium pratense
TPR.G3121 Trifolium pratense
TPR.G330 Trifolium pratense
TPR.G36124 Trifolium pratense
TPR.G4863 Trifolium pratense
TWI09G0244 Tripterygium wilfordii
vmacro18436 Vaccinium macrocarpon
VMungo0251G3240 Vigna mungo
Zm00001eb323180 Zea mays

User provided reference genes

Program Settings