Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p13590 Brassica napus
A10p04290 Brassica napus
Aa31LG1G19080 Aethionema arabicum
Actinidia05843 Actinidia chinensis
Ah.06g190970 Amaranthus hybridus
AL1G15450 Arabidopsis lyrata
AL4G27260 Arabidopsis lyrata
AL80U10030 Arabidopsis lyrata
Aqoxy2G00098 Aquilegia oxysepala
Aqoxy3G01856 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3B9L35 Arachis hypogaea
AT1G05575 Arabidopsis thaliana
AT2G31945 Arabidopsis thaliana
ATR0598G063 Amborella trichopoda
Atru.chr11.2706 Acer truncatum
Atru.chr3.2176 Acer truncatum
Atru.chr3.2177 Acer truncatum
BcaB02g06840 Brassica carinata
BcaC02g11308 Brassica carinata
BcaC05g24363 Brassica carinata
BolC4t23317H Brassica oleracea
BolC5t29171H Brassica oleracea
BraA05t20296Z Brassica rapa
BraA10t42697Z Brassica rapa
C04p17690 Brassica napus
CAN.G129.50 Capsicum annuum
CANSAT11G0834 Cannabis sativa
CARHR005060 Cardamine hirsuta
Carub.0001s0489 Capsella rubella
Carub.0004s1325 Capsella rubella
Ca_03203_v3 Cicer arietinum L.
Cc02_g26900 Coffea canephora
Cc02_g26920 Coffea canephora
Cfa010708 Carpinus fangiana
Ciclev10017204m.g Citrus clementina
Ciclev10033110m.g Citrus clementina
CiPaw.13G035000 Carya illinoinensis
ClCG09G003700 Citrullus lanatus
ClCG10G012700 Citrullus lanatus
COL.COLO4_10444 Corchorus olitorius
COL.COLO4_35454 Corchorus olitorius
Cpa.g.sc119.96 Carica papaya
Cpa.g.sc189.2 Carica papaya
CSS0017159 Camellia sinensis var. sinensis
CSS0018564 Camellia sinensis var. sinensis
CSS0019299 Camellia sinensis var. sinensis
CSS0019909 Camellia sinensis var. sinensis
CSS0030536 Camellia sinensis var. sinensis
DCAR_023306 Daucus carota
DCAR_027044 Daucus carota
DCAR_027045 Daucus carota
DCAR_029591 Daucus carota
Duzib114G0602 Durio zibethinus
ECA236G3701 Erigeron canadensis
EL10Ac4g09614 Beta vulgaris
EL10Ac4g09615 Beta vulgaris
EL10Ac4g09616 Beta vulgaris
Eucgr.B02611 Eucalyptus grandis
Eucgr.B03635 Eucalyptus grandis
FAN11G3093 Fragaria x ananassa
FvH4_3g44500 Fragaria vesca
Glyma.08G158100 Glycine max
Glyma.15G268200 Glycine max
Gohir.A05G401550 Gossypium hirsutum
Gohir.A10G182200 Gossypium hirsutum
Gohir.A13G005400 Gossypium hirsutum
Gohir.D04G014200 Gossypium hirsutum
Gohir.D13G005100 Gossypium hirsutum
Gorai.011G212200 Gossypium raimondii
Gorai.012G016800 Gossypium raimondii
Gorai.013G005600 Gossypium raimondii
GSVIVG01025254001 Vitis vinifera
HanXRQChr01g0021201 Helianthus annuus
HanXRQChr11g0344951 Helianthus annuus
HanXRQChr15g0480671 Helianthus annuus
Haze_03270 Corylus avellana
Hma1.2p1_0541F.1_g174840 Hydrangea macrophylla
Hma1.2p1_1373F.1_g278710 Hydrangea macrophylla
Hma1.2p1_2663F.1_g326415 Hydrangea macrophylla
HPP92_005764 Vanilla planifolia
HPP92_023456 Vanilla planifolia
HPP92_023476 Vanilla planifolia
HPP92_024791 Vanilla planifolia
Lalb_Chr01g0014951 Lupinus albus
Lalb_Chr25g0283671 Lupinus albus
Lj3g0007026 Lotus japonicus
Lsat_1_v5_gn_1_68380 Lactuca sativa
Manes.10G152300 Manihot esculenta
MBI19_g17416_MAGBIO Magnolia biondii
MBI19_g17417_MAGBIO Magnolia biondii
MD00G1055400 Malus domestica
MD02G1319500 Malus domestica
MD03G1011900 Malus domestica
MD11G1015000 Malus domestica
Medtr2g061780 Medicago truncatula
MELO3C023928.2 Cucumis melo
Migut.N01655 Erythranthe guttata
Nitab4.5_0000468g0090 Nicotiana tabacum
Nitab4.5_0002319g0020 Nicotiana tabacum
Nitab4.5_0009236g0010 Nicotiana tabacum
Nn2g15722 Nelumbo nucifera
Nn7g35982 Nelumbo nucifera
Oeu032785.1 Olea europaea
Oeu034890.1 Olea europaea
Os02g0774200 Oryza sativa ssp. japonica
Os06g0207200 Oryza sativa ssp. japonica
Os09g0446700 Oryza sativa ssp. japonica
Peaxi162Scf00245g00096 Petunia axillaris
Peaxi162Scf00402g00810 Petunia axillaris
PGR102G1407 Punica granatum
PGR119G0776 Punica granatum
PGSC0003DMG400028984 Solanum tuberosum
PGSC0003DMG400028988 Solanum tuberosum
Phvul.005G042200 Phaseolus vulgaris
Potri.001G010600 Populus trichocarpa
Potri.001G230900 Populus trichocarpa
Potri.003G215300 Populus trichocarpa
Potri.009G024300 Populus trichocarpa
Prupe.2G002500 Prunus persica
Prupe.6G012500 Prunus persica
Psat1g129080 Pisum sativum
PSO339G1234 Papaver somniferum
QL04p001566 Quercus lobata
RcHm_v2.0_Chr1g0313231 Rosa chinensis
RcHm_v2.0_Chr5g0081201 Rosa chinensis
Rhsim07G0049700 Rhododendron simsii
Rhsim13G0228000 Rhododendron simsii
RhsimUnG0154700 Rhododendron simsii
Sabra09G0015700 Salix brachista
Sabra16G0138300 Salix brachista
SalBow4G0008 Salvia bowleyana
SalBow4G0140 Salvia bowleyana
SalBow4G0755 Salvia bowleyana
Sc06g0004360 Simmondsia chinensis
Sed0000285 Sechium edule
Sed0018607 Sechium edule
Sed0020970 Sechium edule
Solyc01g073720.2 Solanum lycopersicum
Sopen01g033290 Solanum pennellii
Sopen01g033320 Solanum pennellii
Sp4g14310 Schrenkiella parvula
TAR633G0462 Trochodendron aralioides
TAR636G0988 Trochodendron aralioides
TAR636G1609 Trochodendron aralioides
THA.LOC104800946 Tarenaya hassleriana
Thecc.09G215900 Theobroma cacao
Thecc.10G172000 Theobroma cacao
Thhalv10017532m.g Eutrema salsugineum
TPR.G16145 Trifolium pratense
TWI60G0560 Tripterygium wilfordii
vmacro13608 Vaccinium macrocarpon
Zm00001eb100700 Zea mays
Zm00001eb100710 Zea mays
Zm00001eb193270 Zea mays
Zm00001eb373570 Zea mays

User provided reference genes

Program Settings