Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p03770 Brassica napus
Aa31LG11G2780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis
Actinidia08591 Actinidia chinensis
Actinidia11311 Actinidia chinensis
Actinidia35903 Actinidia chinensis
Ah.01g024100 Amaranthus hybridus
Ah.08g214600 Amaranthus hybridus
AL6G18770 Arabidopsis lyrata
AL6G34580 Arabidopsis lyrata
Aqoxy6G00094 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea
AT5G08335 Arabidopsis thaliana
AT5G23320 Arabidopsis thaliana
ATR0580G192 Amborella trichopoda
Atru.chr11.1095 Acer truncatum
AUR62001133 Chenopodium quinoa
AUR62011721 Chenopodium quinoa
AUR62012906 Chenopodium quinoa
BcaB01g05612 Brassica carinata
BolC3t12957H Brassica oleracea
BolC9t59603H Brassica oleracea
BraA03t09724Z Brassica rapa
C03p04250 Brassica napus
CAN.G274.13 Capsicum annuum
CANSAT11G2572 Cannabis sativa
CARHR190220 Cardamine hirsuta
CARHR204740 Cardamine hirsuta
Carub.0006s0723 Capsella rubella
Carub.0006s2109 Capsella rubella
Ca_23673_v3 Cicer arietinum L.
Cc11_g03470 Coffea canephora
CDE02G0493 Ceratophyllum demersum
CDE04G3142 Ceratophyllum demersum
Cfa021666 Carpinus fangiana
Ciclev10016775m.g Citrus clementina
CiPaw.05G171400 Carya illinoinensis
CiPaw.05G171500 Carya illinoinensis
CiPaw.06G062200 Carya illinoinensis
ClCG06G000120 Citrullus lanatus
COL.COLO4_20086 Corchorus olitorius
Cpa.g.sc59.26 Carica papaya
Cre01.g018184 Chlamydomonas reinhardtii
CsaV3_6G005870 Cucumis sativus L.
CSS0046676 Camellia sinensis var. sinensis
DCAR_023472 Daucus carota
DCAR_027608 Daucus carota
Dinv02673 Davidia involucrata
Dinv05788 Davidia involucrata
Duzib106G0072 Durio zibethinus
Duzib132G0983 Durio zibethinus
Duzib177G0848 Durio zibethinus
ECA247G3377 Erigeron canadensis
ECA247G4036 Erigeron canadensis
EL10Ac7g17906 Beta vulgaris
EL10Ac9g21225 Beta vulgaris
Eucgr.D01405 Eucalyptus grandis
Eucgr.G02601 Eucalyptus grandis
Eucgr.G02666 Eucalyptus grandis
FAN12G1282 Fragaria x ananassa
Glyma.09G169200 Glycine max
Glyma.16G218800 Glycine max
Gohir.A11G227800 Gossypium hirsutum
Gohir.A12G132100 Gossypium hirsutum
Gohir.D11G240300 Gossypium hirsutum
Gohir.D12G135700 Gossypium hirsutum
Gorai.007G253700 Gossypium raimondii
Gorai.008G146900 Gossypium raimondii
GSVIVG01026135001 Vitis vinifera
GSVIVG01038778001 Vitis vinifera
GSVIVG01038782001 Vitis vinifera
HanXRQChr01g0011051 Helianthus annuus
HanXRQChr08g0237151 Helianthus annuus
HanXRQChr17g0556721 Helianthus annuus
Haze_11783 Corylus avellana
Haze_27496 Corylus avellana
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla
HPP92_018371 Vanilla planifolia
Hund05579 Selenicereus undatus
Lalb_Chr16g0386851 Lupinus albus
Lalb_Chr24g0398391 Lupinus albus
Lj2g0014996 Lotus japonicus
Lj3g0022258 Lotus japonicus
Lj3P847T27 Lonicera japonica
Lj5g0015714 Lotus japonicus
Lj6P708T54 Lonicera japonica
Lj6P714T12 Lonicera japonica
Lsat_1_v5_gn_5_170960 Lactuca sativa
Lsat_1_v5_gn_9_25720 Lactuca sativa
Manes.08G039100 Manihot esculenta
Mapoly0062s0094 Marchantia polymorpha
MBI14_g08135_MAGBIO Magnolia biondii
MCO05G386 Micromonas commoda
MD13G1003500 Malus domestica
MD16G1003900 Malus domestica
Medtr6g075160 Medicago truncatula
MELO3C022525.2 Cucumis melo
Migut.E00157 Erythranthe guttata
Migut.L01402 Erythranthe guttata
MSTRG.7889 Avicennia marina
Nitab4.5_0004808g0010 Nicotiana tabacum
Nitab4.5_0004979g0110 Nicotiana tabacum
Nn2g12497 Nelumbo nucifera
Nn2g15094 Nelumbo nucifera
Oeu003437.1 Olea europaea
Oeu033041.1 Olea europaea
Os04g0602900 Oryza sativa ssp. japonica
Peaxi162Scf00681g00024 Petunia axillaris
PGR142G2311 Punica granatum
PGR142G4258 Punica granatum
PGSC0003DMG400011510 Solanum tuberosum
Phvul.004G144800 Phaseolus vulgaris
Potri.005G089500 Populus trichocarpa
Potri.007G074500 Populus trichocarpa
Pp3c3_35430 Physcomitrium patens
PRCOL_00002165 Prasinoderma coloniale
Prupe.1G348900 Prunus persica
Psat1g123480 Pisum sativum
PSO170G2864 Papaver somniferum
PSO782G0831 Papaver somniferum
QL04p036080 Quercus lobata
QL04p036464 Quercus lobata
RcHm_v2.0_Chr1g0318101 Rosa chinensis
RcHm_v2.0_Chr4g0446911 Rosa chinensis
Rhsim02G0074800 Rhododendron simsii
Rhsim02G0075200 Rhododendron simsii
RhsimUnG0160700 Rhododendron simsii
Sabra07G0063200 Salix brachista
SalBow2G2042 Salvia bowleyana
Sc08g0003750 Simmondsia chinensis
Sc17g0002110 Simmondsia chinensis
Sed0013821 Sechium edule
Sed0025396 Sechium edule
SEGI_39005 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21625 Striga asiatica
SGA_v2.0_scaffold8G04231 Striga asiatica
SHI07248 Sapria himalayana
SMO117G0139 Selaginella moellendorffii
Solyc04g009010.2 Solanum lycopersicum
Sopen04g004190 Solanum pennellii
Sp6g34610 Schrenkiella parvula
TAR381G0283 Trochodendron aralioides
THA.LOC104800704 Tarenaya hassleriana
Thecc.02G155400 Theobroma cacao
Thecc.05G241200 Theobroma cacao
Thhalv10014725m.g Eutrema salsugineum
TPR.G28016 Trifolium pratense
TPR.G9035 Trifolium pratense
TWI74G1267 Tripterygium wilfordii
unitig_8.g3169 Utricularia gibba
vmacro15638 Vaccinium macrocarpon
VMungo0464G0417 Vigna mungo
Zm00001eb144100 Zea mays

User provided reference genes

Program Settings