Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23740 Brassica napus
A07p26560 Brassica napus
Aa31LG1G19480 Aethionema arabicum
Aa31LG4G470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.872 Anthoceros agrestis
Actinidia01764 Actinidia chinensis
Ah.06g189580 Amaranthus hybridus
AL2G41320 Arabidopsis lyrata
Aqoxy1G00791 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EP2671 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHMT6A Arachis hypogaea
AT1G80190 Arabidopsis thaliana
ATR0210G050 Amborella trichopoda
Atru.BG.159.p Acer truncatum
Atru.chr1.3057 Acer truncatum
AUR62000794 Chenopodium quinoa
AUR62005173 Chenopodium quinoa
BcaB02g07291 Brassica carinata
BcaB05g25289 Brassica carinata
BcaC03g15994 Brassica carinata
BcaC08g45296 Brassica carinata
BolC2t09760H Brassica oleracea
BolC6t38064H Brassica oleracea
BraA02t07366Z Brassica rapa
BraA05t20763Z Brassica rapa
BraA07t30299Z Brassica rapa
C02p37490 Brassica napus
C06p28980 Brassica napus
CAN.G1830.13 Capsicum annuum
CANSAT56G4056 Cannabis sativa
CARHR074290 Cardamine hirsuta
Carub.0002s2733 Capsella rubella
Carub.0005s0104 Capsella rubella
Ca_12943_v3 Cicer arietinum L.
Ca_26811_v3 Cicer arietinum L.
Cc00_g27240 Coffea canephora
Cc04_g04100 Coffea canephora
CDE02G3949 Ceratophyllum demersum
CDE09G0533 Ceratophyllum demersum
CDE09G0914 Ceratophyllum demersum
Cfa001997 Carpinus fangiana
Ciclev10026407m.g Citrus clementina
Ciclev10027256m.g Citrus clementina
CiPaw.01G245000 Carya illinoinensis
ClCG09G002750 Citrullus lanatus
COL.COLO4_12914 Corchorus olitorius
Cpa.g.sc10.228 Carica papaya
Cre03.g161050 Chlamydomonas reinhardtii
CsaV3_7G032580 Cucumis sativus L.
CSS0021095 Camellia sinensis var. sinensis
DCAR_025488 Daucus carota
Dinv30576 Davidia involucrata
Duzib160G0636 Durio zibethinus
Duzib235G0750 Durio zibethinus
ECA234G4462 Erigeron canadensis
EL10Ac4g09393 Beta vulgaris
Eucgr.F02544 Eucalyptus grandis
FAN02G3255 Fragaria x ananassa
FAN14G0801 Fragaria x ananassa
FAN23G0015 Fragaria x ananassa
FAN26G3166 Fragaria x ananassa
FAN28G2078 Fragaria x ananassa
FvH4_1g25440 Fragaria vesca
FvH4_6g30230 Fragaria vesca
Glyma.04G133700 Glycine max
Glyma.07G105000 Glycine max
Gohir.A05G125400 Gossypium hirsutum
Gohir.A10G075900 Gossypium hirsutum
Gohir.A10G076000 Gossypium hirsutum
Gohir.D05G126400 Gossypium hirsutum
Gohir.D10G075500 Gossypium hirsutum
Gorai.009G130400 Gossypium raimondii
Gorai.011G081500 Gossypium raimondii
GSVIVG01017274001 Vitis vinifera
HanXRQChr09g0268691 Helianthus annuus
HanXRQChr15g0463891 Helianthus annuus
Haze_16520 Corylus avellana
Hma1.2p1_0317F.1_g123670 Hydrangea macrophylla
Hma1.2p1_1398F.1_g280805 Hydrangea macrophylla
Hma1.2p1_1398F.1_g280810 Hydrangea macrophylla
Hma1.2p1_1398F.1_g280822 Hydrangea macrophylla
Hma1.2p1_1398F.1_g280823 Hydrangea macrophylla
HPP92_025406 Vanilla planifolia
Hund21699 Selenicereus undatus
Lalb_Chr22g0350991 Lupinus albus
Lj3g0005798 Lotus japonicus
Lj5A69G39 Lonicera japonica
Lsat_1_v5_gn_5_132400 Lactuca sativa
Manes.11G053500 Manihot esculenta
Mapoly0008s0246 Marchantia polymorpha
MBI14_g02860_MAGBIO Magnolia biondii
MCO12G383 Micromonas commoda
MD17G1206800 Malus domestica
Medtr1g052500 Medicago truncatula
Medtr3g005080 Medicago truncatula
Medtr7g052330 Medicago truncatula
Medtr7g052340 Medicago truncatula
MELO3C023404.2 Cucumis melo
Migut.I00797 Erythranthe guttata
MSTRG.11119 Avicennia marina
MSTRG.22727 Avicennia marina
Nitab4.5_0004281g0110 Nicotiana tabacum
Nitab4.5_0006709g0030 Nicotiana tabacum
Nn7g35903 Nelumbo nucifera
Oeu052278.1 Olea europaea
Oeu063807.1 Olea europaea
Os05g0453900 Oryza sativa ssp. japonica
Peaxi162Scf00125g00003 Petunia axillaris
Peaxi162Scf01195g00016 Petunia axillaris
PGR102G1320 Punica granatum
PGSC0003DMG403012981 Solanum tuberosum
Phvul.005G004200 Phaseolus vulgaris
Phvul.005G019100 Phaseolus vulgaris
Potri.006G142300 Populus trichocarpa
Pp3c20_16980 Physcomitrium patens
Pp3c20_17250 Physcomitrium patens
PRCOL_00005608 Prasinoderma coloniale
Prupe.3G081400 Prunus persica
Psat5g222760 Pisum sativum
PSO339G1448 Papaver somniferum
PSO384G1744 Papaver somniferum
QL05p027948 Quercus lobata
RcHm_v2.0_Chr2g0123461 Rosa chinensis
RcHm_v2.0_Chr2g0136471 Rosa chinensis
Rhsim03G0101400 Rhododendron simsii
Rhsim03G0103800 Rhododendron simsii
Rhsim08G0215800 Rhododendron simsii
Sabra06G0111400 Salix brachista
SalBow2G3045 Salvia bowleyana
Sc14g0006620 Simmondsia chinensis
Sed0013432 Sechium edule
SEGI_27675 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02664 Striga asiatica
SMO347G0348 Selaginella moellendorffii
Solyc09g008630.3 Solanum lycopersicum
Sopen09g003430 Solanum pennellii
Sp5g35610 Schrenkiella parvula
TAR369G0040 Trochodendron aralioides
TAR369G0577 Trochodendron aralioides
TAR623G1252 Trochodendron aralioides
THA.LOC104812498 Tarenaya hassleriana
Thecc.06G070800 Theobroma cacao
Thhalv10019155m.g Eutrema salsugineum
TPR.G13435 Trifolium pratense
TPR.G1414 Trifolium pratense
TPR.G1424 Trifolium pratense
TPR.G18869 Trifolium pratense
TPR.G25532 Trifolium pratense
TPR.G30851 Trifolium pratense
TWI12G0849 Tripterygium wilfordii
TWI18G0840 Tripterygium wilfordii
unitig_0.g2002 Utricularia gibba
vmacro18968 Vaccinium macrocarpon
VMungo0331G0566 Vigna mungo
Zm00001eb065860 Zea mays

User provided reference genes

Program Settings