Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17240 Brassica napus
A04p23580 Brassica napus
Aa31LG1G7230 Aethionema arabicum
Aa31LG1G7240 Aethionema arabicum
Aa31LG5G6040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2862 Anthoceros agrestis
Actinidia06121 Actinidia chinensis
Actinidia11220 Actinidia chinensis
Ah.01g013580 Amaranthus hybridus
AL4G25830 Arabidopsis lyrata
Aqoxy4G00042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3YJ1U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BVM079 Arachis hypogaea
AT2G30880 Arabidopsis thaliana
ATR0763G198 Amborella trichopoda
Atru.chr6.2043 Acer truncatum
AUR62015127 Chenopodium quinoa
AUR62017587 Chenopodium quinoa
AUR62017588 Chenopodium quinoa
BcaB01g04076 Brassica carinata
BcaB06g28390 Brassica carinata
BcaB06g28457 Brassica carinata
BcaC01g06018 Brassica carinata
BolC3t14413H Brassica oleracea
BolC4t27504H Brassica oleracea
BraA03t10997Z Brassica rapa
BraA03t10998Z Brassica rapa
BraA04t17884Z Brassica rapa
C03p20350 Brassica napus
C04p60020 Brassica napus
CAN.G237.1 Capsicum annuum
CANSAT64G1857 Cannabis sativa
CARHR124360 Cardamine hirsuta
Carub.0004s1208 Capsella rubella
Ca_06262_v3 Cicer arietinum L.
CBR_g48423 Chara braunii
Cc05_g01390 Coffea canephora
Cfa023545 Carpinus fangiana
Ciclev10031314m.g Citrus clementina
CiPaw.04G137800 Carya illinoinensis
ClCG07G010740 Citrullus lanatus
COL.COLO4_38396 Corchorus olitorius
Cpa.g.sc50.115 Carica papaya
CsaV3_4G007580 Cucumis sativus L.
CSS0019642 Camellia sinensis var. sinensis
DCAR_013324 Daucus carota
Dinv09873 Davidia involucrata
Dinv09874 Davidia involucrata
Duzib133G0803 Durio zibethinus
Duzib211G0680 Durio zibethinus
ECA246G2799 Erigeron canadensis
EL10Ac9g22830 Beta vulgaris
Eucgr.A02027 Eucalyptus grandis
Eucgr.K01227 Eucalyptus grandis
FAN02G0505 Fragaria x ananassa
FAN05G2509 Fragaria x ananassa
FAN06G4649 Fragaria x ananassa
FAN08G2380 Fragaria x ananassa
FAN09G1050 Fragaria x ananassa
FAN14G4495 Fragaria x ananassa
FAN18G0865 Fragaria x ananassa
FvH4_6g38730 Fragaria vesca
Glyma.02G284400 Glycine max
Glyma.14G030600 Glycine max
Gohir.1Z049561 Gossypium hirsutum
Gohir.A07G182700 Gossypium hirsutum
Gohir.A08G051500 Gossypium hirsutum
Gohir.D07G189500 Gossypium hirsutum
Gohir.D08G061300 Gossypium hirsutum
Gorai.001G211100 Gossypium raimondii
Gorai.004G063400 Gossypium raimondii
GSVIVG01020835001 Vitis vinifera
HanXRQChr06g0171641 Helianthus annuus
HanXRQChr17g0541191 Helianthus annuus
Haze_13559 Corylus avellana
Haze_13560 Corylus avellana
Hma1.2p1_0073F.1_g038510 Hydrangea macrophylla
HPP92_018652 Vanilla planifolia
HPP92_018658 Vanilla planifolia
Hund08425 Selenicereus undatus
Lalb_Chr04g0248931 Lupinus albus
Lalb_Chr10g0106551 Lupinus albus
Lj1A589T9 Lonicera japonica
Lj1C589T0 Lonicera japonica
Lj6g0000199 Lotus japonicus
Lj6g0000252 Lotus japonicus
Lj6g0021308 Lotus japonicus
LjContig00049g0017244 Lotus japonicus
Lsat_1_v5_gn_3_35160 Lactuca sativa
Manes.01G130800 Manihot esculenta
Mapoly0039s0099 Marchantia polymorpha
MBI18_g07571_MAGBIO Magnolia biondii
MBI18_g29058_MAGBIO Magnolia biondii
MBI18_g48251_MAGBIO Magnolia biondii
MCO09G271 Micromonas commoda
MD09G1148200 Malus domestica
MD17G1134500 Malus domestica
Medtr5g091000 Medicago truncatula
MELO3C016183.2 Cucumis melo
Migut.M00073 Erythranthe guttata
MSTRG.14902 Avicennia marina
Nitab4.5_0000019g0200 Nicotiana tabacum
Nitab4.5_0003177g0030 Nicotiana tabacum
Nn7g38035 Nelumbo nucifera
Oeu040170.3 Olea europaea
Os03g0666200 Oryza sativa ssp. japonica
Os05g0128700 Oryza sativa ssp. japonica
Os05g0153901 Oryza sativa ssp. japonica
Os07g0138100 Oryza sativa ssp. japonica
Os12g0505950 Oryza sativa ssp. japonica
Peaxi162Scf00416g00116 Petunia axillaris
PGR042G2540 Punica granatum
PGR142G3117 Punica granatum
Phvul.008G194500 Phaseolus vulgaris
Potri.002G057300 Populus trichocarpa
Potri.005G205300 Populus trichocarpa
Pp3c13_22640 Physcomitrium patens
Pp3c23_16670 Physcomitrium patens
Pp3c26_520 Physcomitrium patens
Prupe.3G177900 Prunus persica
Psat2g017280 Pisum sativum
PSO675G4395 Papaver somniferum
PSO675G5558 Papaver somniferum
QL08p045042 Quercus lobata
QL93p2016_0028 Quercus lobata
RcHm_v2.0_Chr2g0152261 Rosa chinensis
Rhsim12G0010700 Rhododendron simsii
Sabra02G0046700 Salix brachista
Sabra05G0156000 Salix brachista
Sc15g0002190 Simmondsia chinensis
Sed0002024 Sechium edule
Sed0010176 Sechium edule
SEGI_28206 Sequoiadendron giganteum
SEGI_40770 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39713 Striga asiatica
SGA_v2.0_scaffold73G24477 Striga asiatica
SMO169G0289 Selaginella moellendorffii
Solyc05g021100.2 Solanum lycopersicum
Solyc05g150127.1 Solanum lycopersicum
Sopen05g017300 Solanum pennellii
Sp4g13350 Schrenkiella parvula
TAR624G0695 Trochodendron aralioides
TAR625G1186 Trochodendron aralioides
THA.LOC104800818 Tarenaya hassleriana
Thecc.01G168300 Theobroma cacao
Thhalv10016548m.g Eutrema salsugineum
TPR.G10151 Trifolium pratense
TWI59G0681 Tripterygium wilfordii
vmacro08738 Vaccinium macrocarpon
VMungo0647G1334 Vigna mungo
Zm00001eb065510 Zea mays
Zm00001eb117740 Zea mays
Zm00001eb217790 Zea mays
Zm00001eb299690 Zea mays
Zm00001eb299700 Zea mays

User provided reference genes

Program Settings