Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41520 Brassica napus
A03p02360 Brassica napus
A03p46850 Brassica napus
Aa31LG11G2140 Aethionema arabicum
Actinidia04845 Actinidia chinensis
Actinidia09247 Actinidia chinensis
Ah.10g032000 Amaranthus hybridus
AL8G37880 Arabidopsis lyrata
Aqoxy3G03572 Aquilegia oxysepala
AT5G61220 Arabidopsis thaliana
ATR0064G063 Amborella trichopoda
Atru.chr2.2420 Acer truncatum
Atru.chr9.371 Acer truncatum
AUR62008495 Chenopodium quinoa
AUR62018162 Chenopodium quinoa
AUR62021597 Chenopodium quinoa
AUR62042435 Chenopodium quinoa
BcaC01g01257 Brassica carinata
BcaC03g15765 Brassica carinata
BcaC03g18433 Brassica carinata
BcaC05g25635 Brassica carinata
BcaC05g25636 Brassica carinata
BcaC06g33172 Brassica carinata
BcaC06g33217 Brassica carinata
BcaC07g40820 Brassica carinata
BcaC07g40932 Brassica carinata
BolC2t12197H Brassica oleracea
BolC2t12409H Brassica oleracea
BolC3t21308H Brassica oleracea
BolC5t30114H Brassica oleracea
BolC6t39173H Brassica oleracea
BolC7t45013H Brassica oleracea
BolC8t51388H Brassica oleracea
BraA02t09093Z Brassica rapa
BraA03t13805Z Brassica rapa
BraA07t31299Z Brassica rapa
BraA10t43343Z Brassica rapa
C02p61460 Brassica napus
C02p63420 Brassica napus
C03p89860 Brassica napus
C05p13760 Brassica napus
C06p42660 Brassica napus
C07p44900 Brassica napus
C07p56170 Brassica napus
C08p38130 Brassica napus
C08p39260 Brassica napus
CAN.G479.31 Capsicum annuum
CANSAT56G2672 Cannabis sativa
CARHR099960 Cardamine hirsuta
CARHR274970 Cardamine hirsuta
Carub.0006s3376 Capsella rubella
Carub.0008s2188 Capsella rubella
Ca_06818_v3 Cicer arietinum L.
CBR_g38475 Chara braunii
Cc00_g02290 Coffea canephora
CDE02G0474 Ceratophyllum demersum
Cfa019297 Carpinus fangiana
Cfa024147 Carpinus fangiana
Ciclev10022528m.g Citrus clementina
CiPaw.11G049800 Carya illinoinensis
ClCG04G011960 Citrullus lanatus
ClCG06G015840 Citrullus lanatus
COL.COLO4_31014 Corchorus olitorius
COL.COLO4_36893 Corchorus olitorius
Cpa.g.sc94.6 Carica papaya
Cre08.g382850 Chlamydomonas reinhardtii
CsaV3_1G005830 Cucumis sativus L.
CSS0011072 Camellia sinensis var. sinensis
Dinv10689 Davidia involucrata
Dinv38784 Davidia involucrata
Duzib084G0757 Durio zibethinus
Duzib205G1485 Durio zibethinus
ECA246G5156 Erigeron canadensis
EL10Ac2g03100 Beta vulgaris
Eucgr.B00568 Eucalyptus grandis
FAN02G1874 Fragaria x ananassa
FAN05G1711 Fragaria x ananassa
FAN09G0998 Fragaria x ananassa
FAN14G4554 Fragaria x ananassa
FvH4_6g47340 Fragaria vesca
Glyma.08G242600 Glycine max
Glyma.18G264800 Glycine max
Gohir.A03G069100 Gossypium hirsutum
Gohir.A12G180600 Gossypium hirsutum
Gohir.D03G095600 Gossypium hirsutum
Gohir.D12G183150 Gossypium hirsutum
Gohir.D12G183300 Gossypium hirsutum
Gorai.003G100300 Gossypium raimondii
Gorai.008G196600 Gossypium raimondii
GSVIVG01007919001 Vitis vinifera
HanXRQChr04g0101451 Helianthus annuus
HanXRQChr05g0157171 Helianthus annuus
HanXRQChr17g0545301 Helianthus annuus
Lalb_Chr10g0093091 Lupinus albus
Lj1g0000800 Lotus japonicus
Lsat_1_v5_gn_1_13721 Lactuca sativa
Lsat_1_v5_gn_5_22101 Lactuca sativa
Manes.06G087400 Manihot esculenta
Manes.14G083600 Manihot esculenta
Mapoly0030s0074 Marchantia polymorpha
MBI16_g16369_MAGBIO Magnolia biondii
MCO16G339 Micromonas commoda
MD00G1156500 Malus domestica
MD08G1088600 Malus domestica
MD09G1062400 Malus domestica
Medtr0287s0050 Medicago truncatula
Medtr7g012870 Medicago truncatula
Medtr7g083770 Medicago truncatula
MELO3C002013.2 Cucumis melo
MELO3C017207.2 Cucumis melo
Migut.D01673 Erythranthe guttata
Nitab4.5_0002881g0040 Nicotiana tabacum
Nitab4.5_0004511g0070 Nicotiana tabacum
Nn3g17388 Nelumbo nucifera
Nn4g23362 Nelumbo nucifera
Nn7g35950 Nelumbo nucifera
Os08g0239000 Oryza sativa ssp. japonica
Os10g0406600 Oryza sativa ssp. japonica
Peaxi162Scf00106g00072 Petunia axillaris
PGR083G1512 Punica granatum
PGSC0003DMG400024653 Solanum tuberosum
Phvul.008G035200 Phaseolus vulgaris
Potri.009G079800 Populus trichocarpa
Pp3c1_9190 Physcomitrium patens
Pp3c9_6850 Physcomitrium patens
PRCOL_00002203 Prasinoderma coloniale
Prupe.3G258000 Prunus persica
Prupe.5G200900 Prunus persica
Psat3g200920 Pisum sativum
PSO478G1650 Papaver somniferum
QL10p018658 Quercus lobata
RcHm_v2.0_Chr2g0166371 Rosa chinensis
Rhsim08G0148900 Rhododendron simsii
Rhsim12G0152500 Rhododendron simsii
Sabra09G0061800 Salix brachista
SalBow5G3312 Salvia bowleyana
Sc04g0003050 Simmondsia chinensis
Sc10g0003220 Simmondsia chinensis
Sed0002201 Sechium edule
Sed0019301 Sechium edule
Sed0023667 Sechium edule
SHI27018 Sapria himalayana
SMO174G0212 Selaginella moellendorffii
Solyc03g115490.1 Solanum lycopersicum
Sopen03g034490 Solanum pennellii
Sp2g24450 Schrenkiella parvula
TAR371G0159 Trochodendron aralioides
TAR622G0455 Trochodendron aralioides
THA.LOC104801321 Tarenaya hassleriana
Thecc.03G097000 Theobroma cacao
Thhalv10005205m.g Eutrema salsugineum
TWI18G0167 Tripterygium wilfordii
unitig_37.g12784 Utricularia gibba
Zm00001eb011200 Zea mays
Zm00001eb398330 Zea mays

User provided reference genes

Program Settings