Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p02450 Brassica napus
A09p11790 Brassica napus
Aa31LG8G15760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis
Actinidia12710 Actinidia chinensis
Actinidia19193 Actinidia chinensis
Actinidia33865 Actinidia chinensis
AL3G51520 Arabidopsis lyrata
Aqoxy3G01739 Aquilegia oxysepala
Aqoxy5G01592 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea
AT2G18250 Arabidopsis thaliana
ATR0796G251 Amborella trichopoda
Atru.chr3.607 Acer truncatum
AUR62004070 Chenopodium quinoa
AUR62007583 Chenopodium quinoa
BcaB03g16615 Brassica carinata
BcaB07g31677 Brassica carinata
BcaC04g22917 Brassica carinata
BcaC04g22919 Brassica carinata
BcaC06g36391 Brassica carinata
BolC7t40861H Brassica oleracea
BolC9t54282H Brassica oleracea
BraA07t28041Z Brassica rapa
BraA09t36827Z Brassica rapa
BraSC76t46620Z Brassica rapa
C07p04600 Brassica napus
C09p13900 Brassica napus
C09p74780 Brassica napus
C09p74830 Brassica napus
CAN.G111.48 Capsicum annuum
CAN.G1645.15 Capsicum annuum
CAN.G2875.1 Capsicum annuum
CAN.G53.14 Capsicum annuum
CAN.G53.15 Capsicum annuum
CARHR108820 Cardamine hirsuta
CARHR108850 Cardamine hirsuta
Carub.0003s3243 Capsella rubella
Ca_21297_v3 Cicer arietinum L.
Ca_24863_v3 Cicer arietinum L.
Cc07_g09720 Coffea canephora
CDE01G0816 Ceratophyllum demersum
CDE12G0116 Ceratophyllum demersum
Cfa027114 Carpinus fangiana
Ciclev10026600m.g Citrus clementina
CiPaw.01G043700 Carya illinoinensis
COL.COLO4_22050 Corchorus olitorius
COL.COLO4_34048 Corchorus olitorius
Cpa.g.sc6.137 Carica papaya
Cre13.g590550 Chlamydomonas reinhardtii
CsaV3_3G014460 Cucumis sativus L.
CSS0019358 Camellia sinensis var. sinensis
CSS0030971 Camellia sinensis var. sinensis
CSS0040556 Camellia sinensis var. sinensis
DCAR_023857 Daucus carota
DCAR_032374 Daucus carota
Dinv13509 Davidia involucrata
Dinv39998 Davidia involucrata
Duzib084G0089 Durio zibethinus
Duzib264G1087 Durio zibethinus
ECA232G2192 Erigeron canadensis
ECA238G4849 Erigeron canadensis
EL10Ac6g15543 Beta vulgaris
FAN11G2897 Fragaria x ananassa
FAN19G0555 Fragaria x ananassa
FAN21G0333 Fragaria x ananassa
FAN25G0668 Fragaria x ananassa
FAN26G2067 Fragaria x ananassa
FvH4_1g13011 Fragaria vesca
FvH4_3g26020 Fragaria vesca
Glyma.01G173050 Glycine max
Glyma.02G276900 Glycine max
Gohir.A09G170800 Gossypium hirsutum
Gohir.A12G064100 Gossypium hirsutum
Gohir.D09G166500 Gossypium hirsutum
Gohir.D12G064000 Gossypium hirsutum
Gorai.006G188300 Gossypium raimondii
Gorai.008G067200 Gossypium raimondii
GSVIVG01018936001 Vitis vinifera
GSVIVG01025946001 Vitis vinifera
HanXRQChr09g0261341 Helianthus annuus
HanXRQChr17g0534461 Helianthus annuus
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla
HPP92_014750 Vanilla planifolia
Hund13990 Selenicereus undatus
Hund16439 Selenicereus undatus
Lalb_Chr05g0212721 Lupinus albus
Lj2A454G55 Lonicera japonica
Lsat_1_v5_gn_2_77221 Lactuca sativa
Lsat_1_v5_gn_4_148240 Lactuca sativa
Manes.01G136850 Manihot esculenta
Manes.02G095600 Manihot esculenta
Mapoly0065s0018 Marchantia polymorpha
MCO08G231 Micromonas commoda
MD02G1144700 Malus domestica
MD15G1258400 Malus domestica
MD15G1258500 Malus domestica
Medtr5g020680 Medicago truncatula
Medtr8g073890 Medicago truncatula
MELO3C006648.2 Cucumis melo
Migut.H00962 Erythranthe guttata
MSTRG.23511 Avicennia marina
Nitab4.5_0000136g0310 Nicotiana tabacum
Nn7g38122 Nelumbo nucifera
Oeu044133.1 Olea europaea
Os02g0134000 Oryza sativa ssp. japonica
Os07g0179400 Oryza sativa ssp. japonica
Peaxi162Scf00008g03516 Petunia axillaris
Peaxi162Scf00130g00618 Petunia axillaris
PGR119G0658 Punica granatum
PGSC0003DMG400015508 Solanum tuberosum
Phvul.002G032200 Phaseolus vulgaris
Potri.005G121200 Populus trichocarpa
Pp3c18_16890 Physcomitrium patens
Pp3c18_18790 Physcomitrium patens
PRCOL_00004729 Prasinoderma coloniale
Prupe.7G156900 Prunus persica
Psat2g158360 Pisum sativum
PSO339G0290 Papaver somniferum
PSO384G2349 Papaver somniferum
PSO731G0046 Papaver somniferum
PSO764G0091 Papaver somniferum
QL06p046600 Quercus lobata
RcHm_v2.0_Chr2g0101171 Rosa chinensis
Rhsim08G0118600 Rhododendron simsii
Sabra05G0099900 Salix brachista
SalBow6G2211 Salvia bowleyana
Sc16g0002660 Simmondsia chinensis
SEGI_37374 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45779 Striga asiatica
SGA_v2.0_scaffold276G46612 Striga asiatica
SMO318G0001 Selaginella moellendorffii
SMO357G0013 Selaginella moellendorffii
Solyc02g062640.4 Solanum lycopersicum
Sopen02g013670 Solanum pennellii
Sp3g31670 Schrenkiella parvula
TAR624G0473 Trochodendron aralioides
THA.LOC104807464 Tarenaya hassleriana
Thecc.01G032800 Theobroma cacao
Thecc.03G010200 Theobroma cacao
Thhalv10022875m.g Eutrema salsugineum
TPR.G2405 Trifolium pratense
TWI53G1618 Tripterygium wilfordii
unitig_21.g20250 Utricularia gibba
vmacro17822 Vaccinium macrocarpon
VMungo1215G3002 Vigna mungo
Zm00001eb231510 Zea mays
Zm00001eb301320 Zea mays

User provided reference genes

Program Settings