Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p27170 Brassica napus
Aa31LG9G10490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis
Actinidia14493 Actinidia chinensis
Ah.02g116260 Amaranthus hybridus
Ah.12g053460 Amaranthus hybridus
Ah.12g057950 Amaranthus hybridus
AL6G46750 Arabidopsis lyrata
Aqoxy7G00537 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CXRB51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea
AT4G11980 Arabidopsis thaliana
ATR0251G001 Amborella trichopoda
ATR0905G001 Amborella trichopoda
Atru.chr9.1491 Acer truncatum
AUR62010550 Chenopodium quinoa
AUR62017343 Chenopodium quinoa
BcaB01g01695 Brassica carinata
BcaB02g09202 Brassica carinata
BcaB02g11533 Brassica carinata
BcaB04g18565 Brassica carinata
BcaC01g04204 Brassica carinata
BcaC04g21182 Brassica carinata
BolC9t56293H Brassica oleracea
C09p34490 Brassica napus
CAN.G630.24 Capsicum annuum
CANSAT21G0478 Cannabis sativa
CARHR254310 Cardamine hirsuta
Carub.0006s3108 Capsella rubella
Ca_12294_v3 Cicer arietinum L.
CBR_g30593 Chara braunii
Cc08_g13610 Coffea canephora
CDE04G3458 Ceratophyllum demersum
Cfa024731 Carpinus fangiana
Ciclev10021310m.g Citrus clementina
CiPaw.11G143800 Carya illinoinensis
ClCG01G003390 Citrullus lanatus
COL.COLO4_23815 Corchorus olitorius
Cpa.g.sc29.48 Carica papaya
CsaV3_5G003450 Cucumis sativus L.
CSS0004055 Camellia sinensis var. sinensis
CSS0006775 Camellia sinensis var. sinensis
CSS0009944 Camellia sinensis var. sinensis
CSS0042147 Camellia sinensis var. sinensis
DCAR_006785 Daucus carota
Dinv37721 Davidia involucrata
Duzib084G1157 Durio zibethinus
Duzib205G0541 Durio zibethinus
ECA233G5834 Erigeron canadensis
EL10Ac5g12672 Beta vulgaris
Eucgr.E00504 Eucalyptus grandis
FAN08G2483 Fragaria x ananassa
FAN13G0401 Fragaria x ananassa
FAN18G3460 Fragaria x ananassa
FvH4_5g01080 Fragaria vesca
Glyma.05G054800 Glycine max
Glyma.05G054900 Glycine max
Gohir.A09G193900 Gossypium hirsutum
Gohir.D09G188100 Gossypium hirsutum
Gorai.006G210900 Gossypium raimondii
GSVIVG01019903001 Vitis vinifera
HanXRQChr07g0186971 Helianthus annuus
Haze_09002 Corylus avellana
Haze_13993 Corylus avellana
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla
HPP92_020651 Vanilla planifolia
Hund14696 Selenicereus undatus
Lalb_Chr05g0225211 Lupinus albus
Lj2A203G54 Lonicera japonica
Lj4g0003091 Lotus japonicus
Lsat_1_v5_gn_6_10661 Lactuca sativa
Manes.01G070700 Manihot esculenta
Mapoly0093s0020 Marchantia polymorpha
MBI04_g28556_MAGBIO Magnolia biondii
MD04G1073000 Malus domestica
Medtr4g101830 Medicago truncatula
MELO3C005608.2 Cucumis melo
MELO3C034534.2 Cucumis melo
Migut.A00879 Erythranthe guttata
MSTRG.25560 Avicennia marina
Nitab4.5_0005167g0040 Nicotiana tabacum
Nitab4.5_0012494g0020 Nicotiana tabacum
Nn1g00505 Nelumbo nucifera
Oeu001909.1 Olea europaea
Os06g0129700 Oryza sativa ssp. japonica
Peaxi162Scf00620g00231 Petunia axillaris
PGR042G1634 Punica granatum
PGSC0003DMG400003941 Solanum tuberosum
Phvul.003G216900 Phaseolus vulgaris
Potri.003G118300 Populus trichocarpa
Pp3c15_11750 Physcomitrium patens
Prupe.5G084800 Prunus persica
Psat4g069480 Pisum sativum
PSO478G3008 Papaver somniferum
PSO478G3534 Papaver somniferum
PSO782G3959 Papaver somniferum
QL12p016126 Quercus lobata
QL12p016291 Quercus lobata
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis
RcHm_v2.0_Chr4g0403961 Rosa chinensis
RcHm_v2.0_Chr4g0425481 Rosa chinensis
RcHm_v2.0_Chr6g0265101 Rosa chinensis
RcHm_v2.0_Chr6g0265181 Rosa chinensis
RcHm_v2.0_Chr7g0200241 Rosa chinensis
Rhsim08G0184400 Rhododendron simsii
Sabra03G0082300 Salix brachista
SalBow6G2643 Salvia bowleyana
SalBow6G4210 Salvia bowleyana
Sc07g0009460 Simmondsia chinensis
Sed0028019 Sechium edule
SGA_v2.0_scaffold37G14871 Striga asiatica
SMO140G0070 Selaginella moellendorffii
Solyc08g079820.3 Solanum lycopersicum
Sopen08g028180 Solanum pennellii
Sp6g05530 Schrenkiella parvula
TAR629G2760 Trochodendron aralioides
THA.LOC104806355 Tarenaya hassleriana
Thecc.03G266100 Theobroma cacao
Thhalv10028825m.g Eutrema salsugineum
TPR.G37619 Trifolium pratense
TWI15G0205 Tripterygium wilfordii
unitig_22.g5479 Utricularia gibba
vmacro19246 Vaccinium macrocarpon
vmacro19247 Vaccinium macrocarpon
VMungo0251G1252 Vigna mungo
VMungo0251G1928 Vigna mungo
Zm00001eb113910 Zea mays
Zm00001eb279110 Zea mays
Zm00001eb378400 Zea mays

User provided reference genes

Program Settings