Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p08810 Brassica napus
Aa31LG3G14060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.394 Anthoceros agrestis
Actinidia01089 Actinidia chinensis
Actinidia22651 Actinidia chinensis
Ah.05g167300 Amaranthus hybridus
Ah.11g043030 Amaranthus hybridus
AL6G41200 Arabidopsis lyrata
Aqoxy6G01249 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7E6QIB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7V26PZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L8L5ZS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WJS3XD Arachis hypogaea
AT4G06534 Arabidopsis thaliana
AT4G06536 Arabidopsis thaliana
ATR0762G037 Amborella trichopoda
Atru.BG.237.p Acer truncatum
Atru.chr13.733 Acer truncatum
AUR62035465 Chenopodium quinoa
AUR62044709 Chenopodium quinoa
AUR62044714 Chenopodium quinoa
BcaB01g01331 Brassica carinata
BraSC37t46123Z Brassica rapa
C09p38410 Brassica napus
CAN.G1030.31 Capsicum annuum
CANSAT25G0849 Cannabis sativa
CARHR264230 Cardamine hirsuta
Carub.0006s2627 Capsella rubella
Ca_13276_v3 Cicer arietinum L.
Ca_15936_v3 Cicer arietinum L.
CBR_g733 Chara braunii
Cc10_g04740 Coffea canephora
CDE01G0679 Ceratophyllum demersum
Cfa009956 Carpinus fangiana
Ciclev10001048m.g Citrus clementina
CiPaw.15G053800 Carya illinoinensis
ClCG05G020100 Citrullus lanatus
COL.COLO4_03654 Corchorus olitorius
Cpa.g.sc21.167 Carica papaya
CsaV3_4G034620 Cucumis sativus L.
CSS0001222 Camellia sinensis var. sinensis
DCAR_012789 Daucus carota
DCAR_019426 Daucus carota
Dinv35933 Davidia involucrata
Dinv39282 Davidia involucrata
Duzib041G0633 Durio zibethinus
Duzib093G1440 Durio zibethinus
ECA232G1346 Erigeron canadensis
ECA247G0009 Erigeron canadensis
EL10As7g23762 Beta vulgaris
Eucgr.F00191 Eucalyptus grandis
FAN15G1938 Fragaria x ananassa
FAN20G1472 Fragaria x ananassa
FAN24G1074 Fragaria x ananassa
FAN27G2110 Fragaria x ananassa
FvH4_2g33990 Fragaria vesca
Glyma.06G042300 Glycine max
Glyma.14G085000 Glycine max
Glyma.15G095100 Glycine max
Glyma.17G239800 Glycine max
Gohir.A05G204600 Gossypium hirsutum
Gohir.A06G020700 Gossypium hirsutum
Gohir.D05G207800 Gossypium hirsutum
Gohir.D06G019009 Gossypium hirsutum
Gorai.009G214400 Gossypium raimondii
Gorai.010G022200 Gossypium raimondii
GSVIVG01009450001 Vitis vinifera
HanXRQChr04g0103941 Helianthus annuus
HanXRQChr09g0267191 Helianthus annuus
HanXRQChr10g0286851 Helianthus annuus
HanXRQChr16g0509011 Helianthus annuus
Haze_18006 Corylus avellana
Haze_18053 Corylus avellana
Haze_18055 Corylus avellana
Hma1.2p1_0360F.1_g135770 Hydrangea macrophylla
HPP92_010365 Vanilla planifolia
HPP92_017369 Vanilla planifolia
Hund05336 Selenicereus undatus
Lalb_Chr14g0368541 Lupinus albus
Lalb_Chr23g0267231 Lupinus albus
Lj1g0008884 Lotus japonicus
Lj4C62G3 Lonicera japonica
Lj5g0017670 Lotus japonicus
Lsat_1_v5_gn_1_22040 Lactuca sativa
Lsat_1_v5_gn_4_127260 Lactuca sativa
Manes.05G176200 Manihot esculenta
Manes.18G040500 Manihot esculenta
MBI16_g04313_MAGBIO Magnolia biondii
MD08G1095800 Malus domestica
MD15G1078600 Malus domestica
Medtr1g019040 Medicago truncatula
Medtr3g102120 Medicago truncatula
MELO3C016778.2 Cucumis melo
Migut.C00543 Erythranthe guttata
Migut.N02734 Erythranthe guttata
MSTRG.1063 Avicennia marina
Nitab4.5_0000287g0020 Nicotiana tabacum
Nitab4.5_0005129g0020 Nicotiana tabacum
Nn5g30368 Nelumbo nucifera
Nn7g37290 Nelumbo nucifera
Oeu009775.1 Olea europaea
Oeu054792.1 Olea europaea
Os02g0614700 Oryza sativa ssp. japonica
Peaxi162Scf00882g00017 Petunia axillaris
PGR083G2110 Punica granatum
PGSC0003DMG400008008 Solanum tuberosum
Phvul.001G024000 Phaseolus vulgaris
Phvul.009G067000 Phaseolus vulgaris
Potri.002G123800 Populus trichocarpa
Potri.014G025000 Populus trichocarpa
Pp3c15_17100 Physcomitrium patens
Prupe.1G431800 Prunus persica
Psat0s3398g0080 Pisum sativum
Psat0s3398g0240 Pisum sativum
Psat0s3591g0040 Pisum sativum
PSO541G5103 Papaver somniferum
PSO675G4695 Papaver somniferum
QL02p004185 Quercus lobata
RcHm_v2.0_Chr6g0308391 Rosa chinensis
Rhsim06G0053300 Rhododendron simsii
Sabra02G0097200 Salix brachista
Sabra14G0017000 Salix brachista
SalBow6G2833 Salvia bowleyana
SalBow6G7027 Salvia bowleyana
SalBow7G0327 Salvia bowleyana
Sc02g0007400 Simmondsia chinensis
Sed0014061 Sechium edule
SEGI_03871 Sequoiadendron giganteum
SEGI_05734 Sequoiadendron giganteum
SEGI_12847 Sequoiadendron giganteum
SEGI_19446 Sequoiadendron giganteum
SEGI_36308 Sequoiadendron giganteum
SEGI_40713 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06974 Striga asiatica
SGA_v2.0_scaffold197G41020 Striga asiatica
SMO112G0032 Selaginella moellendorffii
SMO145G0126 Selaginella moellendorffii
Solyc04g078630.3 Solanum lycopersicum
Sopen04g032210 Solanum pennellii
Sp6g10670 Schrenkiella parvula
Sp6g10680 Schrenkiella parvula
TAR376G0323 Trochodendron aralioides
TAR381G0178 Trochodendron aralioides
TAR625G0654 Trochodendron aralioides
THA.LOC104801428 Tarenaya hassleriana
Thecc.08G002800 Theobroma cacao
Thhalv10028638m.g Eutrema salsugineum
TPR.G24175 Trifolium pratense
TPR.G3800 Trifolium pratense
TWI56G0769 Tripterygium wilfordii
unitig_8.g5031 Utricularia gibba
vmacro21496 Vaccinium macrocarpon
VMungo0647G1506 Vigna mungo
VMungo1309G0408 Vigna mungo
Zm00001eb247120 Zea mays

User provided reference genes

Program Settings